BAC Information

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BAC

Clone NameB6Ng01-325J19
Chromosome1 (Build37)
Map Location 153,426,023 - 153,574,013
singlet/doubletdoublet
Overlap geneNiban
Upstream geneEG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2
Downstream geneEdem3, 1700025G04Rik, LOC668076, 5730449L18Rik, Glt25d2, Rgl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325J19.bB6Ng01-325J19.g
ACCGA113627GA113628
length1,04773
definitionB6Ng01-325J19.b B6Ng01-325J19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,426,023 - 153,427,069)(153,573,942 - 153,574,013)
sequence
gaattcacataagtagaaccttcagatgaagcctggggctgctttccttt
ggatcttaataagagagaaatcaacttatgtcttatataagccattgtta
tttatagaattgctactgtacacagagaagccttatcttaactaatatag
ttgtcttctgttatctgtggcccacagtatcccagccaacacacaaaatg
ccaccatgttgggtctcctttaagaaaaaattggtccaaagacagtagga
aatggtaatcaatgtactgttagtcttagctttaggtctgcctgcctctg
cctctcaagtgctaggcacactattcataattaaccacggcagagccctc
tgtccccagcctgaaacagcctctttctaagaagtgagaaactgttgctc
aggaaagaatatagagatgttaaagaaaggagatggcacagtataagttt
attgtggtctaatatataccttaaatctgctgggcactggtggcgcacac
ctttaatcccctcacttgggaggcagaggcaggcagatctcttgagtttg
aggtcagcctggtttaccgaacaaattccaggactacacaaagagatcct
attttaaaaagaaacaaaactcaaaaccaaaccaaaccggaccccccccc
tccccgcccaatcttaaatctttccaaagtatggatgaagcgaatagaga
tttgaagtaaggaacattaattacagaagactgggaatttctatcatctt
ttacccatctttatgaatgggaaccaaggcactgtgaatgagaagataat
ctttaagaaaacccaaatctaatgtttagaattagagacaattctggact
tgaaagggttaattttgttttatttataatttaattaaaatacatgtact
gcagaagccttataacatatgcagtgttagtttgggcctcctaaacagaa
acttggagagctcttttgttagtaaagaagtatggggcagatgacaccat
ttgcatggaatgggaagtaaggtcagagtagaagggagttggagggg
aaagccatggagaaaaagagagagacagggagggttggggagctgagggg
aacagaggggaggggagagggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_153426023_153427069
seq2: B6Ng01-325J19.b_46_1092

seq1  GAATTCACATAAGTAGAACCTTCAGATGAAGCCTGGGGCTGCTTTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAAGTAGAACCTTCAGATGAAGCCTGGGGCTGCTTTCCTTT  50

seq1  GGATCTTAATAAGAGAGAAATCAACTTATGTCTTATATAAGCCATTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTAATAAGAGAGAAATCAACTTATGTCTTATATAAGCCATTGTTA  100

seq1  TTTATAGAATTGCTACTGTACACAGAGAAGCCTTATCTTAACTAATATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAATTGCTACTGTACACAGAGAAGCCTTATCTTAACTAATATAG  150

seq1  TTGTCTTCTGTTATCTGTGGCCCACAGTATCCCAGCCAACACACAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCTGTTATCTGTGGCCCACAGTATCCCAGCCAACACACAAAATG  200

seq1  CCACCATGTTGGGTCTCCTTTAAGAAAAAATTGGTCCAAAGACAGTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTTGGGTCTCCTTTAAGAAAAAATTGGTCCAAAGACAGTAGGA  250

seq1  AATGGTAATCAATGTACTGTTAGTCTTAGCTTTAGGTCTGCCTGCCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAATCAATGTACTGTTAGTCTTAGCTTTAGGTCTGCCTGCCTCTG  300

seq1  CCTCTCAAGTGCTAGGCACACTATTCATAATTAACCACGGCAGAGCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAGTGCTAGGCACACTATTCATAATTAACCACGGCAGAGCCCTC  350

seq1  TGTCCCCAGCCTGAAACAGCCTCTTTCTAAGAAGTGAGAAACTGTTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGCCTGAAACAGCCTCTTTCTAAGAAGTGAGAAACTGTTGCTC  400

seq1  AGGAAAGAATATAGAGATGTTAAAGAAAGGAGATGGCACAGTATAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAATATAGAGATGTTAAAGAAAGGAGATGGCACAGTATAAGTTT  450

seq1  ATTGTGGTCTAATATATACCTTAAATCTGCTGGGCACTGGTGGCGCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGTCTAATATATACCTTAAATCTGCTGGGCACTGGTGGCGCACAC  500

seq1  CTTTAATCCCCTCACTTGGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCCTCACTTGGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTG  550

seq1  AGGTCAGCCTGGTTTACCGAACAAATTCCAGGACTACACAAAGAGATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCCTGGTTTACCGAACAAATTCCAGGACTACACAAAGAGATCCT  600

seq1  ATTTTAAAAAGAAACAAAACTCAAAACCAAACCAAACCGGACCCCCCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAGAAACAAAACTCAAAACCAAACCAAACCGGACCCCCCCCC  650

seq1  TCCCCGCCCAATCTTAAATCTTTCCAAAGTATGGATGAAGCGAATAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGCCCAATCTTAAATCTTTCCAAAGTATGGATGAAGCGAATAGAGA  700

seq1  TTTGAAGTAAGGAACATTAATTACAGAAGACTGGGAATTTCTATCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTAAGGAACATTAATTACAGAAGACTGGGAATTTCTATCATCTT  750

seq1  TTACCCATCTTTATGAATGGGAACCAAGGCACTGTGAATGAGAAGATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATCTTTATGAATGGGAACCAAGGCACTGTGAATGAGAAGATAAT  800

seq1  CTTTAAGAAAACCCAAATCTAATGTTTAGAATTAGAGACAATTCTGGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAAAACCCAAATCTAATGTTTAGAATTAGAGACAATTCTGGACT  850

seq1  TGAAAGGGTTAATTTTGTTTTATTTATAATTTAATTAAAATACATGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGTTAATTTTGTTTTATTTATAATTTAATTAAAATACATGTACT  900

seq1  GCAGAAGCCTTATAACATATGCAGTGTTAGTTT-GGCCTCCTAAACAGAA  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCAGAAGCCTTATAACATATGCAGTGTTAGTTTGGGCCTCCTAAACAGAA  950

seq1  ACTTGGAGAGCTCTTTTGTTAGTAAAGAAGTATGGGGCAGATGACAACCA  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTGGAGAGCTCTTTTGTTAGTAAAGAAGTATGGGGCAGATGAC-ACCA  999

seq1  TTTGCATGGGAATGGGAAGTAAAGTCAGAGTAGAAGGGAG-TGGAGGGG  1047
      ||||||| |||||||||||||| ||||||||||||||||| ||||||||
seq2  TTTGCAT-GGAATGGGAAGTAAGGTCAGAGTAGAAGGGAGTTGGAGGGG  1047

seq1: chr1_153573942_153574013
seq2: B6Ng01-325J19.g_72_143 (reverse)

seq1  TCCCTCTCCCCTCCCCTCTGTTCCCCTCAGCTCCCCAACCCTCCCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCCCTCCCCTCTGTTCCCCTCAGCTCCCCAACCCTCCCTGTCT  50

seq1  CTCTCTTTTTCTCCATGGCTTT  72
      ||||||||||||||||||||||
seq2  CTCTCTTTTTCTCCATGGCTTT  72