BAC Information

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BAC

Clone NameB6Ng01-325M09
Chromosome1 (Build37)
Map Location 124,731,593 - 124,732,815
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666971
Downstream geneLOC666983, Dpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325M09.bB6Ng01-325M09.g
ACCGA113745GA113746
length1,1831,213
definitionB6Ng01-325M09.b B6Ng01-325M09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgatagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcgagcaatacctctcctgggc
atatattcagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaagagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacaggaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatcctccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacaacattatgaactaccagtaccccggagctcttgactct
agctgcatatatatatcaaagatggcctagtggcatcactggaaagagag
tccattgacttgcaaactttatatgccagtacagggaacaaccaggctaa
aggggggagtgggtgggccaggggaagtgggct
gaattccattacagctcatcctgggggatgaatgagtttattgaggttac
ttatagaacatagacgaggggttgcttacagtagacccaaagtaacctcc
gtgaaagttacccttctctgagagactgtgaacagtttacaggcccgtct
tgcctcttccaagcagccaccatggatctaaatagggtcaagaaggattt
cctctgagtactacattttattacattttggtatttttgtttcaccaagg
ggaaaagcgatctgcacaaactgaaatgcctcaacatttacccagatgtt
gggattgggacttgtatccacattcttctcatcctacatctgttttaaaa
ataactcatggcaaacaaagtaataaagatcctaatcggcactttggtct
gtgttgcctaattggaatctgagtatttggaaggacaagaggtctgttca
atctttaaccctcataggaaagagaaagcagggaaaagcaggtgacctgc
ttagcaagttctcttataaacatactaggaaggtctttatacactatttt
tatctttattatattgagagctcttatttactggggtcatattgattaat
tcctgtaaactgcaacgtatagatttatatggtacacctgtaatgtagta
tgtgttgtgagctcactagggtattttactatcgtttcagaatttgttag
gtaacaaatatgcaggctccaaggtttctgtcacaacatttgtcatataa
tccacgttcattggtagcctaatgaggtaaatgcaagttatttctattcc
agtcataattactaaaactaggtctcatatcacatgtatatatctataca
gctgtgtatgcattattgggttccaggatgaatgcaagtaaaatgggcta
tagtagagctgaatagggtttagaagtttgatgagaagataaaccaaccc
aggttaggaggattatactggtggatcctcagtgtgagatttaaacttga
agctactcagttcagcatctgggtaaggagacaaaagcagtcaagatcag
gaaacatattacagcagaaacagctgcgccagtccaggttcagctattat
gattgaccctggaaagccaatggtaacaatctgtgtaacgttgttgaaca
agtcagctaaggtccaggaaattctaggcaaggttcttcagtctgtacaa
acacaccacggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_124731593_124732815
seq2: B6Ng01-325M09.g_65_1277 (reverse)

seq1  TACC-TGGTGTGTTTGTCAGGACTGAGGA--CTTTCCTAGTA-TTCCTGG  46
      |||| ||||||||||||   |||||| ||  ||| ||||| | |||||||
seq2  TACCGTGGTGTGTTTGTACAGACTGAAGAACCTTGCCTAGAATTTCCTGG  50

seq1  AGCTATAGCTGAACTTGGTCTACCACTGTTTACACAGGATTGTTGGCCAT  96
      | || |||||| ||||| || || ||   ||||||| |||||||  ||| 
seq2  ACCT-TAGCTG-ACTTGTTCAACAAC--GTTACACA-GATTGTT-ACCA-  93

seq1  TTGGCTTTCCAGGTGTTCATCCATATAGGCTTGGACCTGGACCTGCGCAG  146
      ||||||||||||| ||  |||   ||||   || ||||||||  ||||||
seq2  TTGGCTTTCCAGG-GTCAATCATAATAG--CTGAACCTGGACTGGCGCAG  140

seq1  CTGTTTCCTGCTGGTAATATGTTTCCTGATCTTGACCTGCTTTTGTCT-C  195
      |||||| ||||| |||||||||||||||||||||| |||||||||||| |
seq2  CTGTTT-CTGCT-GTAATATGTTTCCTGATCTTGA-CTGCTTTTGTCTCC  187

seq1  TTACCCAGATGCTGAACTGAGTAGCTTCAAGTTTAAATCTCACACTGGAG  245
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTACCCAGATGCTGAACTGAGTAGCTTCAAGTTTAAATCTCACACT-GAG  236

seq1  GATCCACCAGTATATTCCTCCTAACCTGGGTTGGTTTATCTTTCTCATCA  295
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  GATCCACCAGTATAATCCTCCTAACCTGGGTTGGTTTATC-TTCTCATCA  285

seq1  TACTTCTAAACCCTATTCAGCTCTACTATAGCCCATTTTACTTGCATTCA  345
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTAAACCCTATTCAGCTCTACTATAGCCCATTTTACTTGCATTCA  335

seq1  TCCTGGAACCCAATAATGCATACACAGCTGTATAGATATATACATGTGAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACCCAATAATGCATACACAGCTGTATAGATATATACATGTGAT  385

seq1  ATGAGACCTAGTTTTAGTAATTATGACTGGAATAGAAATAACTTGCATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACCTAGTTTTAGTAATTATGACTGGAATAGAAATAACTTGCATTT  435

seq1  ACCTCATTAGGCTACCAATGAACGTGGATTATATGACAAATGTTGTGACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATTAGGCTACCAATGAACGTGGATTATATGACAAATGTTGTGACA  485

seq1  GAAACCTTGGAGCCTGCATATTTGTTACCTAACAAATTCTGAAACGATAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTTGGAGCCTGCATATTTGTTACCTAACAAATTCTGAAACGATAG  535

seq1  TAAAATACCCTAGTGAGCTCACAACACATACTACATTACAGGTGTACCAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACCCTAGTGAGCTCACAACACATACTACATTACAGGTGTACCAT  585

seq1  ATAAATCTATACGTTGCAGTTTACAGGAATTAATCAATATGACCCCAGTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTATACGTTGCAGTTTACAGGAATTAATCAATATGACCCCAGTA  635

seq1  AATAAGAGCTCTCAATATAATAAAGATAAAAATAGTGTATAAAGACCTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGCTCTCAATATAATAAAGATAAAAATAGTGTATAAAGACCTTC  685

seq1  CTAGTATGTTTATAAGAGAACTTGCTAAGCAGGTCACCTGCTTTTCCCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATGTTTATAAGAGAACTTGCTAAGCAGGTCACCTGCTTTTCCCTG  735

seq1  CTTTCTCTTTCCTATGAGGGTTAAAGATTGAACAGACCTCTTGTCCTTCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTCCTATGAGGGTTAAAGATTGAACAGACCTCTTGTCCTTCC  785

seq1  AAATACTCAGATTCCAATTAGGCAACACAGACCAAAGTGCCGATTAGGAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCAGATTCCAATTAGGCAACACAGACCAAAGTGCCGATTAGGAT  835

seq1  CTTTATTACTTTGTTTGCCATGAGTTATTTTTAAAACAGATGTAGGATGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTACTTTGTTTGCCATGAGTTATTTTTAAAACAGATGTAGGATGA  885

seq1  GAAGAATGTGGATACAAGTCCCAATCCCAACATCTGGGTAAATGTTGAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTGGATACAAGTCCCAATCCCAACATCTGGGTAAATGTTGAGG  935

seq1  CATTTCAGTTTGTGCAGATCGCTTTTCCCCTTGGTGAAACAAAAATACCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGTTTGTGCAGATCGCTTTTCCCCTTGGTGAAACAAAAATACCA  985

seq1  AAATGTAATAAAATGTAGTACTCAGAGGAAATCCTTCTTGACCCTATTTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATAAAATGTAGTACTCAGAGGAAATCCTTCTTGACCCTATTTA  1035

seq1  GATCCATGGTGGCTGCTTGGAAGAGGCAAGACGGGCCTGTAAACTGTTCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATGGTGGCTGCTTGGAAGAGGCAAGACGGGCCTGTAAACTGTTCA  1085

seq1  CAGTCTCTCAGAGAAGGGTAACTTTCACGGAGGTTACTTTGGGTCTACTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTCAGAGAAGGGTAACTTTCACGGAGGTTACTTTGGGTCTACTG  1135

seq1  TAAGCAACCCCTCGTCTATGTTCTATAAGTAACCTCAATAAACTCATTCA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAACCCCTCGTCTATGTTCTATAAGTAACCTCAATAAACTCATTCA  1185

seq1  TCCCCCAGGATGAGCTGTAATGGAATTC  1223
      ||||||||||||||||||||||||||||
seq2  TCCCCCAGGATGAGCTGTAATGGAATTC  1213