BAC Information

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BAC

Clone NameB6Ng01-326I17
Chromosome1 (Build37)
Map Location 105,318,307 - 105,319,526
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041056, LOC100041067
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I17.bB6Ng01-326I17.g
ACCGA114327GA114328
length1,2071,171
definitionB6Ng01-326I17.b B6Ng01-326I17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaccagatggagttatttcaaaataatcaggagtcattcattt
tacccccatttaattaactccagctctggatcagatctgtactaagtaca
gagataaaggatgggaaatacagctacagccaacctagaatgagcagaca
aagaatgaggtagaaaaggagggaatggtaacagcatagaaatcagttct
cagtatgaatgggattggaaggactccaccactgactcttcccagaaaag
gagaaacatgacctttgcttaggaacgttcttaagacatccatgtgaact
taatgcttctccagggaagaagaatgaacttgatattctatgtaatcagt
aggtggcacagacaattttatatatgtccctgtaagttttcattggataa
acaaaaaaaccaaaaaaacaaaaacaaaaaacaaaaaaaaaaaaaaaaag
ggattttggcttcctgcactcagtggcagactctgttgagtatcattgag
agtgggagggttataaaagccccacagaagatcctgggaagcataccctg
gtactagcctgcagtatcctcttcaaaccagcagcagaaaagaagcgatg
tctggcatattttaaaacaataattcatgtttcagagtcattagttgcaa
cagagattagactattaactgagattttattttgctgtgttttaaaatag
tcaggaaatacattacaaaaaagtttagaatatatgtcaaacataagtgg
accttagttattttcacaactgttaaataaattggtggaagataggtctg
tatatttgacagtctggtatctattcacagaatgcatcacatttagacca
aagaattcttaccacagctgaacaatgaacaggaataagtttttaaacta
attactttctcactagttagacaattaggaaataagaaatatgtatactt
taaatacctatacatatgtgtatatatttataagtatagaaatgaaatta
tctttgatgatgaaacatcagtgtttgttgccattcattattaattttgt
taaatattcttgtgctgactggcttgaatattatgtttatttatttgaaa
taaagtctctttctgtagcccagatggggaaatggcagaaagagcagaaa
gaccttgccacaagcaagtgtagcaagaaaagacctctgaacattttttt
ataacaa

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatggtggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaactactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctccagggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatgtataatagccagaagctggaaagaacccacat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcataaa
ggaactcacacaatatgtactcgctgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcatg
aaaaatgaagactgaaatgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccatcgcatacactagcaagattttgttgaaa
ggaccaagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcaaaatcagctaatttgatggaatctagggctcc
caatggaggagctagagaaagaacccaaggaacttaaagggatctgcacc
tataggtggaacaacattatgacctaacaagtactcggagctctttactc
tagctgcatatgtatcaaaggatgctagtcggcatcacttgaagagaggt
cccaattgacaccgcactttgtattgctcagtacaggactgctcaggtca
aattgcgaagttgggttgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_105318307_105319526
seq2: B6Ng01-326I17.b_52_1258

seq1  GAATTCACACCAGATGGAGTTATTTCAAAATAATCAGGAGTCATTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCAGATGGAGTTATTTCAAAATAATCAGGAGTCATTCATTT  50

seq1  TACCCCCATTTAATTAACTCCAGCTCTGGATCAGATCTGTACTAAGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCATTTAATTAACTCCAGCTCTGGATCAGATCTGTACTAAGTACA  100

seq1  GAGATAAAGGATGGGAAATACAGCTACAGCCAACCTAGAATGAGCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGGATGGGAAATACAGCTACAGCCAACCTAGAATGAGCAGACA  150

seq1  AAGAATGAGGTAGAAAAGGAGGGAATGGTAACAGCATAGAAATCAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAGGTAGAAAAGGAGGGAATGGTAACAGCATAGAAATCAGTTCT  200

seq1  CAGTATGAATGGGATTGGAAGGACTCCACCACTGACTCTTCCCAGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGAATGGGATTGGAAGGACTCCACCACTGACTCTTCCCAGAAAAG  250

seq1  GAGAAACATGACCTTTGCTTAGGAACGTTCTTAAGACATCCATGTGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACATGACCTTTGCTTAGGAACGTTCTTAAGACATCCATGTGAACT  300

seq1  TAATGCTTCTCCAGGGAAGAAGAATGAACTTGATATTCTATGTAATCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTCTCCAGGGAAGAAGAATGAACTTGATATTCTATGTAATCAGT  350

seq1  AGGTGGCACAGACAATTTTATATATGTCCCTGTAAGTTTTCATTGGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCACAGACAATTTTATATATGTCCCTGTAAGTTTTCATTGGATAA  400

seq1  ACAAAAAAACCAAAAAAACAAAAACAAAAAACAAAAAAAAAAAAAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAACCAAAAAAACAAAAACAAAAAACAAAAAAAAAAAAAAAAAG  450

seq1  GGATTTTGGCTTCCTGCACTCAGTGGCAGACTCTGTTGAGTATCATTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGGCTTCCTGCACTCAGTGGCAGACTCTGTTGAGTATCATTGAG  500

seq1  AGTGGGAGGGTTATAAAAGCCCCACAGAAGATCCTGGGAAGCATACCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGGGTTATAAAAGCCCCACAGAAGATCCTGGGAAGCATACCCTG  550

seq1  GTACTAGCCTGCAGTATCCTCTTCAAACCAGCAGCAGAAAAGAAGCGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGCCTGCAGTATCCTCTTCAAACCAGCAGCAGAAAAGAAGCGATG  600

seq1  TCTGGCATATTTTAAAACAATAATTCATGTTTCAGAGTCATTAGTTGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATATTTTAAAACAATAATTCATGTTTCAGAGTCATTAGTTGCAA  650

seq1  CAGAGATTAGACTATTAACTGAGATTTTATTTTGCTGTGTTTTAAAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATTAGACTATTAACTGAGATTTTATTTTGCTGTGTTTTAAAATAG  700

seq1  TCAGGAAATACATTACAAAAAAGTTTAGAATATATGTCAAACATAAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAATACATTACAAAAAAGTTTAGAATATATGTCAAACATAAGTGG  750

seq1  ACCTTAGTTATTTTCACAACTGTTAAATAAATTGGTGGAAGATAGGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGTTATTTTCACAACTGTTAAATAAATTGGTGGAAGATAGGTCTG  800

seq1  TATATTTGACAGTCTGGTATCTATTCACAGAATGCATCACATTTAGACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGACAGTCTGGTATCTATTCACAGAATGCATCACATTTAGACCA  850

seq1  AAGAATTCTTACCACAGCTGAACAATGAACAGGAATAAGTTTTTAAACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTTACCACAGCTGAACAATGAACAGGAATAAGTTTTTAAACTA  900

seq1  ATTACTTTCTCACTAGTTAGACAATTAGGAAATAAGAAATATGTATACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTCTCACTAGTTAGACAATTAGGAAATAAGAAATATGTATACTT  950

seq1  TAAATACCTATACATATGTGTATATATTTATAAGTATAGAAATGAAATTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCTATACATATGTGTATATATTTATAAGTATAGAAATGAAATTA  1000

seq1  TCTTTGATGATGAAAACATCAGTGTTTTGTTGCCATTCATTATTAATTTT  1050
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  TCTTTGATGATG-AAACATCAGTG-TTTGTTGCCATTCATTATTAATTTT  1048

seq1  GTTAAATATTCTTTGTTGCTGACTGGCTTGATATTTATGTTTATTTATTT  1100
      |||||||||||||   |||||||||||||||   ||||||||||||| ||
seq2  GTTAAATATTCTT--GTGCTGACTGGCTTGAATATTATGTTTATTTA-TT  1095

seq1  TGAAATAAAGTCTCTTTCTGTAGCCCAGGATGGTGAAATGGCAGAAAGAG  1150
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  TGAAATAAAGTCTCTTTCTGTAGCCCA-GATGGGGAAATGGCAGAAAGAG  1144

seq1  CAAGAGAGACCTTGCCACAAAGCAAGTGGAAGGCAAGAAAAGACTCCTGA  1200
      | ||| |||||||||||| ||||||||| |  ||||||||||||  ||||
seq2  C-AGAAAGACCTTGCCAC-AAGCAAGTGTA--GCAAGAAAAGACCTCTGA  1190

seq1  ACATTTTTTTTAATTAACAA  1220
      ||||||||||    ||||||
seq2  ACATTTTTTT---ATAACAA  1207


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