BAC Information

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BAC

Clone NameB6Ng01-327N10
Chromosome1 (Build37)
Map Location 12,325,462 - 12,326,531
singlet/doubletsinglet
Overlap genenone
Upstream geneA830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327N10.bB6Ng01-327N10.g
ACCGA115265GA115266
length1,2091,069
definitionB6Ng01-327N10.b B6Ng01-327N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaattaggaaactcaaagggatgaaaaacacctaaagaaatg
gtcaatatccttagtcatcagggaaatgcaaatcaaaaggtccctaggat
tccacctcacaccagtcagaatggctaagatcaaaaattcatgtgacagc
agatgatggcaaggatgtggagaaagaggaacattctgccattgctggtg
ggactgtaaactattaaaaccactttgaaaatctgtctggcgattcctca
aaaattagacatagtattatctgaggacccagctataccattcctgagca
tatatccaaaagatactccaacatataacaagaacacattctccactatg
ttctgagtagccttttttataatattcagaagctggaaagaagccagatg
tccttcataagaggaattgatacagaaaatgaggtacatttacacaatgg
agttctattcagctattaaaaacaatgacttcatgaaattcttaggcaaa
tgggtagaactagaaaatatcatcttgagtgaggtcacccaataacaaaa
gaacacacatgatacacactgattgataagtggatattggcccagaagct
caaaatacccaagatacaattcacagaacacatgaagctcaagaagaagg
aagaccaaagtgtagatactttagtccttcttagaaggaggaacaacata
ctcaactaaaaaaggaaaaggctcttccggttccaccacctctgggtcac
cttgggcacgaatcggtggacagtcccatggtccccataggactctccat
gcaatgttaggagcactggtgagtggaacaaaacatctgttccaaaccaa
ttgtgacagacatgtgacagcaggagcaaggacacgggagccctgcctga
ccagaggcttgggttccttatgatcagtacttggtttccaacagacaaga
cagctccacgggttctcagaggagataccacctccaggcactgtaacatg
ccaggatcttaggattctaggatccaggatacaggagcttggtcacacca
gggatctcaggtctctgaggagctgactgccaagaactcttgacacaccc
agatctcagtcacaggaggcaaggatcacagaatcaagaaagctggtctc
tgaggagtcctgatcaacttgcaatttatagatatggaacagggcctcct
aacacggat
gaattccaggccagctttgtctgcaatgaaagatggtgcttgaaaaataa
gggaagggatgattaatcagaatagactggggacatcagaacttattgga
gccaggaagatgtgttttcttaaagtagcatcaaaaccatggatcactta
aaattatgattgggagtcctttagatttaagcagtccactaaaaccagtg
gtagtgattaccgcatgcctatagtctctttcaatttcttccaaaaatga
tacagtggctgaaatacataagctattaaaactgaagagcaaacaggcag
ctagaatctaaagtgctaacatgccctttttaaatgggaacacatggcca
actggaatatgagcgtgcaaaatgaatggtactaccagtgactatgaatg
tggctggctgacaaatctagagtcaggatgcaaactgtttagctccttgt
ctagcctgcctcaccataacatcattcttgagccatttctcagtttcatg
ggtttcagcagaagcaacagacaacctcacagaaaacctcaccaattaga
tgatgttttctaaatgaaacttgtgggttgatccatggggtaggtgaagg
caaatgtagttactgtgatatttcacagatggagcaaaggacttatagtc
tttgagcctgcctttcctcacacataacaatatttaaattatttatgaat
tggggaaataaagacatcatggtgacatcatagtaattacattgctactt
atgactattcttttaatgaagacatggttaatattcacttgatgtttttt
gtaaactagaaagtaataatatggcttctcaacttaaacttgagggatgg
agataaactttctctaaaagaggggaaggaattcagatactgggctaatt
ttcatatgtgtgtttgttttctgcccctttcttctggagtctaactttca
tgagaataatttataacatgtcttgaatctagatagtattagatgtttaa
aaatgagttaatgcatggattagtcacttgagtccctcaacgtttgttag
agactgctggtatgcttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12325462_12326531
seq2: B6Ng01-327N10.g_66_1134 (reverse)

seq1  ACAAGCATACCCAGCAGTCTCTAACAGACGTTGAGGGACTCAGTTGACTA  50
      ||||||||| |||||||||||||||| |||||||||||||||  ||||||
seq2  ACAAGCATA-CCAGCAGTCTCTAACAAACGTTGAGGGACTCAAGTGACTA  49

seq1  ATCCATGCATTTAACTCATTTTTAAACATTCTTATACTATCTTAGATTCA  100
      ||||||||| |||||||||||||||||| ||| |||||||| ||||||||
seq2  ATCCATGCA-TTAACTCATTTTTAAACA-TCTAATACTATC-TAGATTCA  96

seq1  AGACATG-TATAAATTA-TCTCATGAAAGTTAGACTCCAGAAGAAAGGGG  148
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  AGACATGTTATAAATTATTCTCATGAAAGTTAGACTCCAGAAGAAAGGGG  146

seq1  CAGAAAACAAACACACATATGAAAATTAGCCCAGTATCTGAATTCCTTCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACAAACACACATATGAAAATTAGCCCAGTATCTGAATTCCTTCC  196

seq1  CCTCTTTTAGAG-AAGTTTATCTCCATCCCTCAAGTTTAAGTTGAGAAGC  247
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTAGAGAAAGTTTATCTCCATCCCTCAAGTTTAAGTTGAGAAGC  246

seq1  CATATTATTACTTTCTAGTTTACAAAAAACATCAAGTGAATATTAACCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATTACTTTCTAGTTTACAAAAAACATCAAGTGAATATTAACCAT  296

seq1  GTCTTCATTAAAAGAATAGTCATAAGTAGCAATGTAATTACTATGATGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATTAAAAGAATAGTCATAAGTAGCAATGTAATTACTATGATGTC  346

seq1  ACCATGATGTCTTTATTTCCCCAATTCATAAATAATTTAAATATTGTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATGTCTTTATTTCCCCAATTCATAAATAATTTAAATATTGTTAT  396

seq1  GTGTGAGGAAAGGCAGGCTCAAAGACTATAAGTCCTTTGCTCCATCTGTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGAAAGGCAGGCTCAAAGACTATAAGTCCTTTGCTCCATCTGTG  446

seq1  AAATATCACAGTAACTACATTTGCCTTCACCTACCCCATGGATCAACCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCACAGTAACTACATTTGCCTTCACCTACCCCATGGATCAACCCA  496

seq1  CAAGTTTCATTTAGAAAACATCATCTAATTGGTGAGGTTTTCTGTGAGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCATTTAGAAAACATCATCTAATTGGTGAGGTTTTCTGTGAGGT  546

seq1  TGTCTGTTGCTTCTGCTGAAACCCATGAAACTGAGAAATGGCTCAAGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGCTTCTGCTGAAACCCATGAAACTGAGAAATGGCTCAAGAAT  596

seq1  GATGTTATGGTGAGGCAGGCTAGACAAGGAGCTAAACAGTTTGCATCCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATGGTGAGGCAGGCTAGACAAGGAGCTAAACAGTTTGCATCCTG  646

seq1  ACTCTAGATTTGTCAGCCAGCCACATTCATAGTCACTGGTAGTACCATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGATTTGTCAGCCAGCCACATTCATAGTCACTGGTAGTACCATTC  696

seq1  ATTTTGCACGCTCATATTCCAGTTGGCCATGTGTTCCCATTTAAAAAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCACGCTCATATTCCAGTTGGCCATGTGTTCCCATTTAAAAAGGG  746

seq1  CATGTTAGCACTTTAGATTCTAGCTGCCTGTTTGCTCTTCAGTTTTAATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAGCACTTTAGATTCTAGCTGCCTGTTTGCTCTTCAGTTTTAATA  796

seq1  GCTTATGTATTTCAGCCACTGTATCATTTTTGGAAGAAATTGAAAGAGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTATTTCAGCCACTGTATCATTTTTGGAAGAAATTGAAAGAGAC  846

seq1  TATAGGCATGCGGTAATCACTACCACTGGTTTTAGTGGACTGCTTAAATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCATGCGGTAATCACTACCACTGGTTTTAGTGGACTGCTTAAATC  896

seq1  TAAAGGACTCCCAATCATAATTTTAAGTGATCCATGGTTTTGATGCTACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGACTCCCAATCATAATTTTAAGTGATCCATGGTTTTGATGCTACT  946

seq1  TTAAGAAAACACATCTTCCTGGCTCCAATAAGTTCTGATGTCCCCAGTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAACACATCTTCCTGGCTCCAATAAGTTCTGATGTCCCCAGTCT  996

seq1  ATTCTGATTAATCATCCCTTCCCTTATTTTTCAAGCACCATCTTTCATTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATTAATCATCCCTTCCCTTATTTTTCAAGCACCATCTTTCATTG  1046

seq1  CAGACAAAGCTGGCCTGGAATTC  1070
      |||||||||||||||||||||||
seq2  CAGACAAAGCTGGCCTGGAATTC  1069