BAC Information

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BAC

Clone NameB6Ng01-328A12
Chromosome1 (Build37)
Map Location 98,714,709 - 98,715,858
singlet/doubletsinglet
Overlap geneSlco4c1
Upstream geneGm1833
Downstream geneEG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346, D1Ertd622e, Hisppd1, Zh2c2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328A12.bB6Ng01-328A12.g
ACCGA115401GA115402
length1,1861,130
definitionB6Ng01-328A12.b B6Ng01-328A12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttggctattaaaaacaaagacacaatgagttttgcaggcaa
atggatggaaatagaaaatatcaccctgagtgaggtaatcctgatccaaa
aggacatgcactcaatgacaaagtggatattacccatggagtccagaaca
cccatgatataccctatagagccaaagaagctaaacaagaaagaagaccc
aagaaaggatgaacacttagaagggcaaacaacatcatcatagaaagcag
aaggagggaaggaactggatggaagaggggtatggggaggcaggatccag
tgtggtcagagataggagagaggcctcaaaagctaggagaaagaatgcaa
atcttcagctgctaggattggtggggaatctctaggaagtcccagagacc
tgggataggggaatcccctcagaactcaatgagagtgaccttagctgaga
tgcctatcagtggggatgtgtaacctgaagaggccacctcctatagctac
ccaggtacctcagtggaggtatagagccaccaacccaccaacaaaacttt
caaccccaacatttttctgtctacagaaagtgaacgaatggccaatcaat
aacaagtacaacttgagacccatcccatgggctagcactaatccctgaca
ttattaatgattctctgttattcttacagaaaggaccctagcataactgt
cctctgagaggctctacccagcagcagactgaaacatgcaaatacccaca
gccaaacatttgatggatatcagggactcttatggaagagttgggggaag
ggtggaaggctcagaaggggatggaaacccctcagaaaaccaacagagtt
aactaatctgaaccctcccacacacacacacacacacacacacacacaca
cacacacacacacaccgggaactctcaaggactgagcccaccaaaagaac
atacccaggctagactgagcctccatcccatatgtaacagacatgcagct
cagtcctccatgactgccctgtctgaactccactgggagagattgcccaa
atcagccagagacttgatgtgccctggaggaaggtgaaaggaagccttca
ttcctctcctgagaagggaggcaataagggaaagacctctgtaaggggac
catgggtaggggtagcaatgtctgcgagaggaaggt

gaattcttactctaaattgaaaatgtgtagttaatgctgagatttctgag
gctgtagggtagtgggacacaaaaaaagataactacccttcattctatca
gttaagtaatttactgtgaaaatatatgatcagaaggagatataaaacct
acactgtaaagtgagttttaaacaactcgtccccaaaagcatcacataaa
tttccttagcttaaatttttgtgctgtaaacatctcaaataagctcaatc
aaccaacaatgaaagaattaaaatatgaccgtgtgagccaatggtggtaa
cacagacttgtaacctcagtacatgagctgtaactccaggagaatcagat
gtcacagatcatctttagctacctgagttcctgagctattggggtatgtg
aggccctgtcttaaagaaaacaaaagaaataaaaacgatgttttactttg
tgtgtgtacgcatacctgtatttagaagcataaagtttaaagtatgtgtt
gttggcaactattcttcttactccttggtgttttcataggttgacaacgg
aaataaataaaatgtgagtggtttgaggcttttggtgaactttagaggca
tgaacctttatgttttgagtttgtggggttttttgtttttgtttattttg
ttgttgtttgttttaagaaaatgaggaatctgtacctaggcaatgatcac
ctccgttctggagcatgggtttcacaccgtggtctacacaactagacaat
ggtgccttggcacaggatgttctcacaggcaggagccagttcccaaagca
atctcctcctccttttcacccttcattttctgctttgtctagatcctctt
cgaccgaaatagtagacacaatgacattctgactttgaaatgatacctct
gttcctgggggcggtggtttatagagaacaatcgcaagtccattgagata
tggtgataactttacaagtacacctaaatacaaacaaacaaacaaaacaa
acaaacaaacaaacaaacaaatgtcagctttggaccttactgatgaataa
aacacagtttccagtatgtatctcacaaataaaacattttctatttgaag
tatgaatataagaatagtaattctatagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98714709_98715858
seq2: B6Ng01-328A12.g_64_1193

seq1  GAATTCTTACTCTAAATTGAAAATGTGTAGTTAATGCTGAGATTTCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCTAAATTGAAAATGTGTAGTTAATGCTGAGATTTCTGAG  50

seq1  GCTGTAGGGTAGTGGGACACAAAAAAAGATAACTACCCTTCATTCTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGGTAGTGGGACACAAAAAAAGATAACTACCCTTCATTCTATCA  100

seq1  GTTAAGTAATTTACTGTGAAAATATATGATCAGAAGGAGATATAAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTAATTTACTGTGAAAATATATGATCAGAAGGAGATATAAAACCT  150

seq1  ACACTGTAAAGTGAGTTTTAAACAACTCGTCCCCAAAAGCATCACATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAAAGTGAGTTTTAAACAACTCGTCCCCAAAAGCATCACATAAA  200

seq1  TTTCCTTAGCTTAAATTTTTGTGCTGTAAACATCTCAAATAAGCTCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTAGCTTAAATTTTTGTGCTGTAAACATCTCAAATAAGCTCAATC  250

seq1  AACCAACAATGAAAGAATTAAAATATGACCGTGTGAGCCAATGGTGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACAATGAAAGAATTAAAATATGACCGTGTGAGCCAATGGTGGTAA  300

seq1  CACAGACTTGTAACCTCAGTACATGAGCTGTAACTCCAGGAGAATCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTGTAACCTCAGTACATGAGCTGTAACTCCAGGAGAATCAGAT  350

seq1  GTCACAGATCATCTTTAGCTACCTGAGTTCCTGAGCTATTGGGGTATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGATCATCTTTAGCTACCTGAGTTCCTGAGCTATTGGGGTATGTG  400

seq1  AGGCCCTGTCTTAAAGAAAACAAAAGAAATAAAAACGATGTTTTACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGTCTTAAAGAAAACAAAAGAAATAAAAACGATGTTTTACTTTG  450

seq1  TGTGTGTACGCATACCTGTATTTAGAAGCATAAAGTTTAAAGTATGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTACGCATACCTGTATTTAGAAGCATAAAGTTTAAAGTATGTGTT  500

seq1  GTTGGCAACTATTCTTCTTACTCCTTGGTGTTTTCATAGGTTGACAACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAACTATTCTTCTTACTCCTTGGTGTTTTCATAGGTTGACAACGG  550

seq1  AAATAAATAAAATGTGAGTGGTTTGAGGCTTTTGGTGAACTTTAGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAAATGTGAGTGGTTTGAGGCTTTTGGTGAACTTTAGAGGCA  600

seq1  TGAACCTTTATGTTTTGAGTTTGTGGGGTTTTTTGTTTTTGTTTATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTTATGTTTTGAGTTTGTGGGGTTTTTTGTTTTTGTTTATTTTG  650

seq1  TTGTTGTTTGTTTTAAGAAAATGAGGAATCTGTACCTAGGCAATGATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTGTTTTAAGAAAATGAGGAATCTGTACCTAGGCAATGATCAC  700

seq1  CTCCGTTCTGGAGCATGGGTTTCACACCGTGGTCTACACAACTAGACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTTCTGGAGCATGGGTTTCACACCGTGGTCTACACAACTAGACAAT  750

seq1  GGTGCCTTGGCACAGGATGTTCTCACAGGCAGGAGCCAGTTCCCAAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTTGGCACAGGATGTTCTCACAGGCAGGAGCCAGTTCCCAAAGCA  800

seq1  ATCTCCTCCTCCTTTTCACCCTTCATTTTCTGCTTTGTCTAGATCCTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCCTCCTTTTCACCCTTCATTTTCTGCTTTGTCTAGATCCTCTT  850

seq1  CGACCGAAATAGTAGACACAATGACATTCTGACTTTGAAATGATACCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCGAAATAGTAGACACAATGACATTCTGACTTTGAAATGATACCTCT  900

seq1  GTTCCTGGGGGCGGTGGTTTATAGAGAACAATCGCAAGTCCATTGAAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  GTTCCTGGGGGCGGTGGTTTATAGAGAACAATCGCAAGTCCATTGA--GA  948

seq1  TATGGTGATAACTTTACAAGTAACACCTAAATACAAAACAAAACAAAACA  1000
      ||||||||||||||||||||| |||||||||||| |||||||   |||||
seq2  TATGGTGATAACTTTACAAGT-ACACCTAAATAC-AAACAAA--CAAACA  994

seq1  AAACAAAACAAAACAAAACAAAACAAAACAAATGTCAGGCTTTGGACCTT  1050
      |||| |||||||   |||||||   |||||||||||| |||||||||| |
seq2  AAAC-AAACAAA--CAAACAAA--CAAACAAATGTCA-GCTTTGGACC-T  1037

seq1  TACTGATGAATAAAAACACAGTTTCCAGTATGTAATTCTTCACAAATAAA  1100
      ||||||||||| ||||||||||||||||||||||  || |||||||||||
seq2  TACTGATGAAT-AAAACACAGTTTCCAGTATGTA--TC-TCACAAATAAA  1083

seq1  ACATTTTCTATTTTGAAGTAATGATTATAAGGAATAGTAATTCTATAGTT  1150
      |||||||||| |||||||| |||| ||||| |||||||||||||||||||
seq2  ACATTTTCTA-TTTGAAGT-ATGAATATAA-GAATAGTAATTCTATAGTT  1130


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