BAC Information

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BAC

Clone NameB6Ng01-328L08
Chromosome1 (Build37)
Map Location 48,719,136 - 48,808,396
singlet/doubletdoublet
Overlap geneLOC666903
Upstream geneLOC546734, LOC674566, LOC100041936
Downstream geneLOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328L08.bB6Ng01-328L08.g
ACCGA115893GA115894
length1,1811,124
definitionB6Ng01-328L08.b B6Ng01-328L08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,807,216 - 48,808,396)(48,719,136 - 48,720,144)
sequence
gaattcatgagaactttacttatatgatcattcttagccctcggggtata
aattgtctgatgctctaaataaagctggctattatgagacttagtttctg
tctcatttgttagttccattctcccaggtcctaccacctctagaatgatg
acaagcttagaaacaggcaatacaacaattttctctagaagtgaaaattg
aattaagcaattaagttggaagaagagtttcgatccgtttctgtttcttt
tcatgtccatactaacatttgatagagatttgtatgtactgagaatgaaa
aaataaacaaaaaatgatgatagaagctaagtgtaatcagctgagtaaac
aaaggtttattttaccttcatttattttttaaggagatgagaatgtctga
gcaaatggagcaaccctctttgtgctggctatgtagacaaataataaagt
atcattgaaatcaatctgaagtgcagagagtatctacttacataactgtg
agattatcattcattgataagaggctgagaagagttgacaaaagcctaga
agatgcagacttttgaatacacaatatttagaggaaagcctgtaagacca
aaccctagatgaagactgatctcacccatactgaacatcaatgggtaatt
taataaaaatctttttagcaaggagttataatgaaagaaatttggcttca
atacattagtttccagcttttaaacatagatgtacatggtcaactgaatt
aacaacgtagtattttctttgtatttgggcccacgtatcagatatatgtt
ttattttcttgattgaaccatataaaatatgcattcacatgctgaggttc
aaattttgaagacattctcctcagtcctttagcatcttatttcattttaa
cctcatttatttattttcttagaagtttagtgtacacaacaagtaataag
tttcctgttgatactttctattttttaaatttattttatatgtttaagtg
ttgtgcctgcaattatttctatgcgacttcttgtatgctgatgccagtgg
aggtcagaagttgtcagttctcatgatctgaataattggcgagggtgtca
tgtagcttcttaaaatggaacctcaggttttctgaaatagcatcagtacc
taatcacttaagttcgcctcatcccttgatg

gaattcatctgtgtatcagatctgttgtttctgaaggagactatttcctt
acagttatataccacctctggttaacagaatctttctatgacctcatgaa
tagatccctgtggaggtggttttcaagaggacacacttatgactgagtga
taacaaaaaagtctttgtcacgttgtacaatgtcaagttgttagtccctg
ggctaatttatatcaattttaagaagataatcttctgataaagactgatt
gagacactactcagtgggtatagaaatatcgaatttggagtaatttcact
gctgtattccttcaacaaaatattagtgttatattttccgcaaagcacat
gatctacctagtcttagaatattgttcactatagcagttttaggtatagg
ttctgtatcataaagtgagccttaaatccaatgcaaaaggagttgattat
tcccataacattgtgtcactactaatgtcataaaatatgggaaatctagg
tagtgtactactagaatctttaccccattgaaatgctttcatgttattga
ggaagaactctgcatgctaccagggagaatagaagtcatcaatatcaccc
agctacaaactctgtggctgcaatatatacagatacattatttttattta
agctgcattctttatttctttcattataattatttatgttgagtctcctt
ttgcatgggtatattaatatgatcaggtgaacaagcagtaaaacacacat
gtagagtagaagtcagatgactacacgaatatgcctgttctgttctatat
acatgttccaggaatcaaacatgaagcttggcaacaagagtctatatctc
atgagcgctatttctgatcttagaaataatcctatataaataatgctgat
ttttaattacctatattagattatgtataaactttaacatcagtatctgg
gtttttttgtattctcaattttcattcaagatagtcagtaattataaagt
ttctcatgacttgatgtacaaatggcatacactgtgcacttctatgagat
gctcacatctcaaaatatgtatttttttactaacatactacattcaaata
tttttatgggtggtgtgtgagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48807216_48808396
seq2: B6Ng01-328L08.b_46_1226 (reverse)

seq1  CATCAAGGGATTGGAGACG-ACTT-AGTGATTAAGGGTACTGAATGCTAT  48
      |||||||||||  ||| || |||| ||||||||  ||||||| |||||||
seq2  CATCAAGGGAT--GAGGCGAACTTAAGTGATTA--GGTACTG-ATGCTAT  45

seq1  TTCAGAAAACCTGA-GTTCAATTTTAAGAAGCTACATGACA-CCTCG-CA  95
      |||||||||||||| |||| ||||||||||||||||||||| ||||| ||
seq2  TTCAGAAAACCTGAGGTTCCATTTTAAGAAGCTACATGACACCCTCGCCA  95

seq1  ATTA-TCAGATCCATGAGAACTGACAACTTCTGACCTCCACTGGCATCAA  144
      |||| |||||| |||||||||||||||||||||||||||||||||||| |
seq2  ATTATTCAGAT-CATGAGAACTGACAACTTCTGACCTCCACTGGCATC-A  143

seq1  GCATACAAG-AGTCGCATAGAAATAATTGCAGGCACAACACTTAAACATA  193
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAAGAAGTCGCATAGAAATAATTGCAGGCACAACACTTAAACATA  193

seq1  TAAAATAAATTTAAAAAATAGAAAGTATCAACAGGAAACTTATTACTTGT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATTTAAAAAATAGAAAGTATCAACAGGAAACTTATTACTTGT  243

seq1  TGTGTACACTAAACTTCTAAGAAAATAAATAAATGAGGTTAAAATGAAAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACACTAAACTTCTAAGAAAATAAATAAATGAGGTTAAAATGAAAT  293

seq1  AAGATGCTAAAGGACTGAGGAGAATGTCTTCAAAATTTGAACCTCAGCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTAAAGGACTGAGGAGAATGTCTTCAAAATTTGAACCTCAGCAT  343

seq1  GTGAATGCATATTTTATATGGTTCAATCAAGAAAATAAAACATATATCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCATATTTTATATGGTTCAATCAAGAAAATAAAACATATATCTG  393

seq1  ATACGTGGGCCCAAATACAAAGAAAATACTACGTTGTTAATTCAGTTGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTGGGCCCAAATACAAAGAAAATACTACGTTGTTAATTCAGTTGAC  443

seq1  CATGTACATCTATGTTTAAAAGCTGGAAACTAATGTATTGAAGCCAAATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATCTATGTTTAAAAGCTGGAAACTAATGTATTGAAGCCAAATT  493

seq1  TCTTTCATTATAACTCCTTGCTAAAAAGATTTTTATTAAATTACCCATTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTATAACTCCTTGCTAAAAAGATTTTTATTAAATTACCCATTG  543

seq1  ATGTTCAGTATGGGTGAGATCAGTCTTCATCTAGGGTTTGGTCTTACAGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGTATGGGTGAGATCAGTCTTCATCTAGGGTTTGGTCTTACAGG  593

seq1  CTTTCCTCTAAATATTGTGTATTCAAAAGTCTGCATCTTCTAGGCTTTTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCTAAATATTGTGTATTCAAAAGTCTGCATCTTCTAGGCTTTTG  643

seq1  TCAACTCTTCTCAGCCTCTTATCAATGAATGATAATCTCACAGTTATGTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCTTCTCAGCCTCTTATCAATGAATGATAATCTCACAGTTATGTA  693

seq1  AGTAGATACTCTCTGCACTTCAGATTGATTTCAATGATACTTTATTATTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATACTCTCTGCACTTCAGATTGATTTCAATGATACTTTATTATTT  743

seq1  GTCTACATAGCCAGCACAAAGAGGGTTGCTCCATTTGCTCAGACATTCTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACATAGCCAGCACAAAGAGGGTTGCTCCATTTGCTCAGACATTCTC  793

seq1  ATCTCCTTAAAAAATAAATGAAGGTAAAATAAACCTTTGTTTACTCAGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTAAAAAATAAATGAAGGTAAAATAAACCTTTGTTTACTCAGCT  843

seq1  GATTACACTTAGCTTCTATCATCATTTTTTGTTTATTTTTTCATTCTCAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACACTTAGCTTCTATCATCATTTTTTGTTTATTTTTTCATTCTCAG  893

seq1  TACATACAAATCTCTATCAAATGTTAGTATGGACATGAAAAGAAACAGAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAAATCTCTATCAAATGTTAGTATGGACATGAAAAGAAACAGAA  943

seq1  ACGGATCGAAACTCTTCTTCCAACTTAATTGCTTAATTCAATTTTCACTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATCGAAACTCTTCTTCCAACTTAATTGCTTAATTCAATTTTCACTT  993

seq1  CTAGAGAAAATTGTTGTATTGCCTGTTTCTAAGCTTGTCATCATTCTAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAATTGTTGTATTGCCTGTTTCTAAGCTTGTCATCATTCTAGA  1043

seq1  GGTGGTAGGACCTGGGAGAATGGAACTAACAAATGAGACAGAAACTAAGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGGACCTGGGAGAATGGAACTAACAAATGAGACAGAAACTAAGT  1093

seq1  CTCATAATAGCCAGCTTTATTTAGAGCATCAGACAATTTATACCCCGAGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAATAGCCAGCTTTATTTAGAGCATCAGACAATTTATACCCCGAGG  1143

seq1  GCTAAGAATGATCATATAAGTAAAGTTCTCATGAATTC  1181
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAATGATCATATAAGTAAAGTTCTCATGAATTC  1181


seq1: chr1_48719136_48720144
seq2: B6Ng01-328L08.g_191_1189

seq1  AGAGGACACACTTATGACTGAGTGATAACAAAAAAGTCTTTGTCACGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACACACTTATGACTGAGTGATAACAAAAAAGTCTTTGTCACGTTG  50

seq1  TACAATGTCAAGTTGTTAGTCCCTGGGCTAATTTATATCAATTTTAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTCAAGTTGTTAGTCCCTGGGCTAATTTATATCAATTTTAAGAA  100

seq1  GATAATCTTCTGATAAAGACTGATTGAGACACTACTCAGTGGGTATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCTTCTGATAAAGACTGATTGAGACACTACTCAGTGGGTATAGAA  150

seq1  ATATCGAATTTGGAGTAATTTCACTGCTGTATTCCTTCAACAAAATATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGAATTTGGAGTAATTTCACTGCTGTATTCCTTCAACAAAATATTA  200

seq1  GTGTTATATTTTCCGCAAAGCACATGATCTACCTAGTCTTAGAATATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATATTTTCCGCAAAGCACATGATCTACCTAGTCTTAGAATATTGT  250

seq1  TCACTATAGCAGTTTTAGGTATAGGTTCTGTATCATAAAGTGAGCCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAGCAGTTTTAGGTATAGGTTCTGTATCATAAAGTGAGCCTTAA  300

seq1  ATCCAATGCAAAAGGAGTTGATTATTCCCATAACATTGTGTCACTACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATGCAAAAGGAGTTGATTATTCCCATAACATTGTGTCACTACTAA  350

seq1  TGTCATAAAATATGGGAAATCTAGGTAGTGTACTACTAGAATCTTTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAAAATATGGGAAATCTAGGTAGTGTACTACTAGAATCTTTACCC  400

seq1  CATTGAAATGCTTTCATGTTATTGAGGAAGAACTCTGCATGCTACCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAATGCTTTCATGTTATTGAGGAAGAACTCTGCATGCTACCAGGG  450

seq1  AGAATAGAAGTCATCAATATCACCCAGCTACAAACTCTGTGGCTGCAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAAGTCATCAATATCACCCAGCTACAAACTCTGTGGCTGCAATA  500

seq1  TATACAGATACATTATTTTTATTTAAGCTGCATTCTTTATTTCTTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGATACATTATTTTTATTTAAGCTGCATTCTTTATTTCTTTCATT  550

seq1  ATAATTATTTATGTTGAGTCTCCTTTTGCATGGGTATATTAATATGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTTATGTTGAGTCTCCTTTTGCATGGGTATATTAATATGATCA  600

seq1  GGTGAACAAGCAGTAAAACACACATGTAGAGTAGAAGTCAGATGACTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACAAGCAGTAAAACACACATGTAGAGTAGAAGTCAGATGACTACA  650

seq1  CGAATATGCCTGTTCTGTTCTATATACATGTTCCAGGAATCAAACATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATGCCTGTTCTGTTCTATATACATGTTCCAGGAATCAAACATGAA  700

seq1  GCTTGGCAACAAGAGTCTATATCTCATGAGCGCTATTTCTGATCTTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCAACAAGAGTCTATATCTCATGAGCGCTATTTCTGATCTTAGAA  750

seq1  ATAATCCTATATAAATAATGCTGATTTTTAATTACCTATATTAGATTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTATATAAATAATGCTGATTTTTAATTACCTATATTAGATTATG  800

seq1  TATAAACTTTAAACATCAGTATCT-GGTTTTTTTGTATTCTCAATTTTCA  849
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  TATAAACTTT-AACATCAGTATCTGGGTTTTTTTGTATTCTCAATTTTCA  849

seq1  TTCAAGATAGTCAGTAATTATAAAGTTTCTCATGACTTGATGTACAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCAAGATAGTCAGTAATTATAAAGTTTCTCATGACTTGATGTAC-AAAT  898

seq1  GGCATACACTGTGCACTTCTATGAGAATTGCTCAACATTCCTCAAAATAT  949
      ||||||||||||||||||||||||||  ||||| ||||  ||||||||||
seq2  GGCATACACTGTGCACTTCTATGAGA--TGCTC-ACAT--CTCAAAATAT  943

seq1  GTTATTTTTTTAACTAAACATACTACATTTAAAATATTTTTATTGGTGTG  999
      | ||||||||| ||| ||||||||||| || |||||||||||| |||| |
seq2  G-TATTTTTTT-ACT-AACATACTACA-TTCAAATATTTTTATGGGTG-G  988

seq1  TGTGT-AGTGA  1009
      ||||| |||||
seq2  TGTGTGAGTGA  999


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