BAC Information

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BAC

Clone NameB6Ng01-328P14
Chromosome1 (Build37)
Map Location 106,236,096 - 106,237,290
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383546, LOC100041134, Cdh20, Rnf152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328P14.bB6Ng01-328P14.g
ACCGA116084GA116085
length1,1751,224
definitionB6Ng01-328P14.b B6Ng01-328P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacctaggtttttaatgagaaacgatcatcttttttagcttctt
tgaatgttagtgtaaaatgcggaactttatacaggatttttgtgagcaat
gatgaccggatggtcatcccatcagatgctgaattctacaaataaaatta
tctatcacaattatgagggacactttacattttctaaataaatttttctc
aactaaaaaagaattttcattagttttgacatcaaatatactattgaatg
ggaaatgcccctcaataatattccaaatataattacaatttcaaagaaat
aattgtctgtctacctggtacagatatgtatttctttataatgaaaatta
tttcaaaatagtatgaaattttagatttaaaaaacattgtaatagttctc
caaatgtctcccaagctttggttcaagacacgtttgaatttgccatcttg
gagtctttctattattttgcacatttaactcattctgttagaggagatgc
tgaacattcaaaacacacatgtatggcataataaaaccttaaagcatata
tcagtcactatcccatactacccatgacgtgagaatattttcaaatgcat
aggactcaccatctgtatatgctgctgtttctcaatattaagtttacaga
gtctgaacggctgaactgcttcattggagtaataccacacatcataaatg
gaaaacttagcttggtgggtggttttgtaaaatgattacaccatggaact
accatccagatggagaaagagtttcatttgtaccccaagcacttctttac
atcattgtggtcttctgaatggtctctgactaccatctgggattgttatt
aagctcctaagatttcaatagactgtgcaatattttctatcagcttctca
aaattaaaattctgagactagtcactgaatgaagctatagatcataactc
attttcccttttatcaaaaaggtagtttttctctcatatatatcttaatg
actttccccttctctatcctcccagttctcccacattcatccatccagat
ataccgctcttctgtctctcataaaacaaaacaacaaagcccaaaagatc
ccttagctcctgattactgcttagctcctcaatgatgactggtgatccat
ccatagctgactgatgatccacttc

gaattctttgtttagctttgtaccgcatttttaagagggttatttggttt
tctggaatctacgttcttgaattctttctatatattggatattagccctc
tataggatttaggattggtaaagatcctattggatcttttcccattctgt
tggtttcctttttgtcttattgacagtgtcctttgcctaacataagcttt
gcaattttatcaacctatcttgctgttaatgattatctatagttccttta
aatcatagttgagcaagcaaccagtcctactatgctgcttcagccaagta
ttttgacctacattaaaaggctgaataatgatgtctggttctttgccaaa
ataagtcagtgtctgctttcttccatagataattatatgggctactgcct
cataatatggcaggatattatgtttaggagatatacttgaatgtatccac
ataagaggaagtttttgccacaataatcccgtaggtttatgggtcatgtt
aaaaatcagcaaatgcataggcaaagaataatctatataagtaacaaact
gttttttcaatagctctttctacttgttctaaggccagcaatctttcaga
ggttaaagattgaggagaggtagaatcaacactccttttaagtacataaa
ataagaatttcagttctcctgtagtaagctttaaatatgtgtgaagccaa
ttgatatcacctaacaatgtttgaaaatcattaaagtttttttttgaaaa
atgggaaacctattttattaaatcttttctttatttacatttcaaatgct
atccagaatgttccctataccctcccctgccctgctccctacacactcac
tcccacttctagactggtgttcccctctactggggcatataaagtttgcc
agaccaaggccattgtccctatggataagtatcttctggggatatacagc
tgggcctctatgctcattttccaacatgagatggtctttaatatctgttt
tagatctacattctctggcccaatgatacccttcttattatcaggacaaa
ttactggggcagacctgatgtccctccttgtgactttgtccacatcattt
tgaaaatgaccaacctcccacattaaaaacatccttgtttcttgtgaaag
atgcctgcccagtgattcttacagcagcagcccatagtcttgacacttgc
aaagatcatgcctcgccaagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106236096_106237290
seq2: B6Ng01-328P14.b_47_1221

seq1  GAATTCCACCTAGGTTTTTAATGAGAAACGATCATCTTTTTTAGCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTAGGTTTTTAATGAGAAACGATCATCTTTTTTAGCTTCTT  50

seq1  TGAATGTTAGTGTAAAATGCGGAACTTTATACAGGATTTTTGTGAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTAGTGTAAAATGCGGAACTTTATACAGGATTTTTGTGAGCAAT  100

seq1  GATGACCGGATGGTCATCCCATCAGATGCTGAATTCTACAAATAAAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCGGATGGTCATCCCATCAGATGCTGAATTCTACAAATAAAATTA  150

seq1  TCTATCACAATTATGAGGGACACTTTACATTTTCTAAATAAATTTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCACAATTATGAGGGACACTTTACATTTTCTAAATAAATTTTTCTC  200

seq1  AACTAAAAAAGAATTTTCATTAGTTTTGACATCAAATATACTATTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAAAGAATTTTCATTAGTTTTGACATCAAATATACTATTGAATG  250

seq1  GGAAATGCCCCTCAATAATATTCCAAATATAATTACAATTTCAAAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCCCCTCAATAATATTCCAAATATAATTACAATTTCAAAGAAAT  300

seq1  AATTGTCTGTCTACCTGGTACAGATATGTATTTCTTTATAATGAAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTGTCTACCTGGTACAGATATGTATTTCTTTATAATGAAAATTA  350

seq1  TTTCAAAATAGTATGAAATTTTAGATTTAAAAAACATTGTAATAGTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATAGTATGAAATTTTAGATTTAAAAAACATTGTAATAGTTCTC  400

seq1  CAAATGTCTCCCAAGCTTTGGTTCAAGACACGTTTGAATTTGCCATCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTCTCCCAAGCTTTGGTTCAAGACACGTTTGAATTTGCCATCTTG  450

seq1  GAGTCTTTCTATTATTTTGCACATTTAACTCATTCTGTTAGAGGAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTCTATTATTTTGCACATTTAACTCATTCTGTTAGAGGAGATGC  500

seq1  TGAACATTCAAAACACACATGTATGGCATAATAAAACCTTAAAGCATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTCAAAACACACATGTATGGCATAATAAAACCTTAAAGCATATA  550

seq1  TCAGTCACTATCCCATACTACCCATGACGTGAGAATATTTTCAAATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACTATCCCATACTACCCATGACGTGAGAATATTTTCAAATGCAT  600

seq1  AGGACTCACCATCTGTATATGCTGCTGTTTCTCAATATTAAGTTTACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCACCATCTGTATATGCTGCTGTTTCTCAATATTAAGTTTACAGA  650

seq1  GTCTGAACGGCTGAACTGCTTCATTGGAGTAATACCACACATCATAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACGGCTGAACTGCTTCATTGGAGTAATACCACACATCATAAATG  700

seq1  GAAAACTTAGCTTGGTGGGTGGTTTTGTAAAATGATTACACCATGGAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTAGCTTGGTGGGTGGTTTTGTAAAATGATTACACCATGGAACT  750

seq1  ACCATCCAGATGGAGAAAGAGTTTCATTTGTACCCCAAGCACTTCTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCAGATGGAGAAAGAGTTTCATTTGTACCCCAAGCACTTCTTTAC  800

seq1  ATCATTGTGGTCTTCTGAATGGTCTCTGACTACCATCTGGGATTGTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTGGTCTTCTGAATGGTCTCTGACTACCATCTGGGATTGTTATT  850

seq1  AAGCTCCTAAGATTTCAATAGACTGTGCAATATTTTCTATCAGGCTTCTC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGCTCCTAAGATTTCAATAGACTGTGCAATATTTTCTATCA-GCTTCTC  899

seq1  AAAATTAAAATTCTGAGACTAGTCACTGAATGAAGCTATAGATCATAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAATTCTGAGACTAGTCACTGAATGAAGCTATAGATCATAACT  949

seq1  CATTTTCCCTTTTATCAAAAAGGTAGTTTTTCTCTCATATATATCTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCCTTTTATCAAAAAGGTAGTTTTTCTCTCATATATATCTTAAT  999

seq1  GACTTTCCCCTTCCTCTATTCCTCCCAGTTCCTTCCCACATTCCATCCCA  1050
      |||||||||||| ||||| ||||||||||||  ||||||||| ||| |||
seq2  GACTTTCCCCTT-CTCTA-TCCTCCCAGTTC--TCCCACATT-CAT-CCA  1043

seq1  TCCAGATATACCGCTCTTCTGTCTCTCATTAAAAACAAACAAACAAAAGC  1100
      |||||||||||||||||||||||||||||  ||||||||  ||||||   
seq2  TCCAGATATACCGCTCTTCTGTCTCTCAT--AAAACAAAACAACAAA--G  1089

seq1  CCCAAAAGATCCCTTTAGCTCCTTGGTTACTTGCTCTAGCTCCTCCATTG  1150
      ||||||||||||| |||||||| || |||| |||| |||||||| || ||
seq2  CCCAAAAGATCCC-TTAGCTCC-TGATTAC-TGCT-TAGCTCCT-CAATG  1134

seq1  GTGAACCTGTGATCCATCCAATAGCTGACTGTGTGCCTCCACTTC  1195
       || ||  ||||||||||| |||||||||||  ||  ||||||||
seq2  ATG-ACTGGTGATCCATCC-ATAGCTGACTG-ATG-ATCCACTTC  1175


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