BAC Information

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BAC

Clone NameB6Ng01-328P17
Chromosome1 (Build37)
Map Location 128,092,064 - 128,232,738
singlet/doubletdoublet
Overlap geneE030049G20Rik
Upstream geneActr3, Slc35f5, Lypd1
Downstream geneLOC383559, Mgat5, LOC667090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328P17.bB6Ng01-328P17.g
ACCGA116088GA116089
length1,191470
definitionB6Ng01-328P17.b B6Ng01-328P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,231,523 - 128,232,738)(128,092,064 - 128,092,539)
sequence
gaattcaattcccagcaaccacatggtggctcacaaccatctgtaataga
atctgatgccctcttctggtgtgtctgaagagagcaatggtgtactcata
tatataaattaaataaataaatctttaacacagaagaataaaaggaaaaa
aaccagaacacaaatgtcttttaacacatgcatatatttatatatcctaa
cccatgcctcttttcttctgtggatctggtcctcatacactctgatagat
ctccactcagtgtctatgcactgtgaactttaaggtactctactctagaa
gagtgtgtgcactctgctttgtcaccttgagcctgttctttccatctgtg
gcctagtttaactactgcatctccctgttctttggccatatttccagccc
tgtgttactcctttctcctaggatacccttcagtatatatacttctcatc
ataggacatgattcctcatgctacagtgcccttctcactaattctatatg
tctttgactttgagaatatatttctgtcttacacttcttgaaagtaggca
tctaataaaagaaagaaagaaagtaggcatcgtaattcacagtactcagt
aatcctaaatagtacaaaaatttttttaaatatcataaaaatgctaaaga
tgaacttactgtgaaatgtcagctaagtgtgtgtgtgcgcgcatgcgcgt
gcggcacgtgcttatttgcatagatgtatggcagggttacgtctgcatat
gtgtttgtacatgcaaataccagaagtcaacctccactgtcattcctcaa
gcactgtccaccttgttttcttgaaacagggtcatgcaggtatgaggacc
tgagtttgatatgacaagcactttaccaagtgaaccatctccccagaagc
cttgaaagtccgagtatcttaatgtaattcaacttttaaatctttcccta
tcaactagaatatatacacaatgaaatctttccttcttaaatttggcttg
ctaagattatcagaaatcttagtttcaaccctcctcaatttcaagtcccc
tttgctgccatagtccatctggcctacgacatatgcatctccttttgatg
agtcagtggagtgcgactcggggctgtgatgcttgacatcatacatgcgt
agacaaaagaataaattgaggactgaattggactgcatctg

acactggaggaagtgggtcactgaggatggaatttttatagcctggccag
gcttcctacttgtcctctgtttgctggctctgtatgaccttacagcttcc
tgctcttgatgccagccttccctcaacaacatggactggatctccttgag
ttatcggccaaaacaaacacttcctgtcttccctggatcatggcacagat
ttttgttggaggaacaaaaagaatattaagattcttggtgacaaattgca
tctgaaggagtaaattcattgcttaaaagttcaaagaaactctcagaatc
cacagtggctaggatgcattaggatgcattcttatggaacattttccctt
catgcagaaggaagaagaccctttccattttgccattcggattcagaaga
aagtaaaactcctctttactagaatatgcccgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128231523_128232738
seq2: B6Ng01-328P17.b_49_1239 (reverse)

seq1  CAGATGCAGTTCAATACTCAGTCTCTTCCACATCTATATCTTTTGTCCTA  50
      |||||||||| ||||  |||||| ||  || || ||| |||||||| |||
seq2  CAGATGCAGTCCAAT--TCAGTC-CT--CA-ATTTAT-TCTTTTGT-CTA  42

seq1  CGCAATGGTAATTGATGGTCAGCATCACAGCCCCGAGGTCCGGCAACTCA  100
      ||||   |||  |||||   |||||||||||||||| |||  |||   ||
seq2  CGCA--TGTA--TGATGTCAAGCATCACAGCCCCGA-GTC--GCACTCCA  85

seq1  CTGACTCATCAAAGGGAGATGCAATTATGTTCGTAGGGCCAGATGGACTA  150
      ||||||||||||| |||||||||  |||| ||||| ||||||||||||||
seq2  CTGACTCATCAAAAGGAGATGCA--TATG-TCGTA-GGCCAGATGGACTA  131

seq1  TGGCAGCAAAGGGGACTTGGAAATTGAGGAGGGTTGAAACTAAAGATTTT  200
      |||||||||||||||||| |||||||||||||||||||||| |||| |||
seq2  TGGCAGCAAAGGGGACTT-GAAATTGAGGAGGGTTGAAACT-AAGA-TTT  178

seq1  CTGATTAATTCTTAGCAAGCCAAATTTAAGAAGGAAAGATTTCATTGTGT  250
      |||||  | |||||||||||||||||||||||||||||||||||||||||
seq2  CTGAT--AATCTTAGCAAGCCAAATTTAAGAAGGAAAGATTTCATTGTGT  226

seq1  ATAATATTCTAGTTGATAGGGAAAGATTTAAAAGTTGAATTACATTAAGA  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-ATATTCTAGTTGATAGGGAAAGATTTAAAAGTTGAATTACATTAAGA  275

seq1  TACTCGGACTTTCAAGGCTTCTGGGGAGATGGTTCACTTGGTAAAGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCGGACTTTCAAGGCTTCTGGGGAGATGGTTCACTTGGTAAAGTGCT  325

seq1  TGTCATATCAAACTCAGGTCCTCATACCTGCATGACCCTGTTTCAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATCAAACTCAGGTCCTCATACCTGCATGACCCTGTTTCAAGAAA  375

seq1  ACAAGGTGGACAGTGCTTGAGGAATGACAGTGGAGGTTGACTTCTGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTGGACAGTGCTTGAGGAATGACAGTGGAGGTTGACTTCTGGTAT  425

seq1  TTGCATGTACAAACACATATGCAGACGTAACCCTGCCATACATCTATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTACAAACACATATGCAGACGTAACCCTGCCATACATCTATGCA  475

seq1  AATAAGCACGTGCCGCACGCGCATGCGCGCACACACACACTTAGCTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCACGTGCCGCACGCGCATGCGCGCACACACACACTTAGCTGACA  525

seq1  TTTCACAGTAAGTTCATCTTTAGCATTTTTATGATATTTAAAAAAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGTAAGTTCATCTTTAGCATTTTTATGATATTTAAAAAAATTTT  575

seq1  TGTACTATTTAGGATTACTGAGTACTGTGAATTACGATGCCTACTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTATTTAGGATTACTGAGTACTGTGAATTACGATGCCTACTTTCTT  625

seq1  TCTTTCTTTTATTAGATGCCTACTTTCAAGAAGTGTAAGACAGAAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTATTAGATGCCTACTTTCAAGAAGTGTAAGACAGAAATATA  675

seq1  TTCTCAAAGTCAAAGACATATAGAATTAGTGAGAAGGGCACTGTAGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAGTCAAAGACATATAGAATTAGTGAGAAGGGCACTGTAGCATG  725

seq1  AGGAATCATGTCCTATGATGAGAAGTATATATACTGAAGGGTATCCTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCATGTCCTATGATGAGAAGTATATATACTGAAGGGTATCCTAGG  775

seq1  AGAAAGGAGTAACACAGGGCTGGAAATATGGCCAAAGAACAGGGAGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGTAACACAGGGCTGGAAATATGGCCAAAGAACAGGGAGATGC  825

seq1  AGTAGTTAAACTAGGCCACAGATGGAAAGAACAGGCTCAAGGTGACAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAAACTAGGCCACAGATGGAAAGAACAGGCTCAAGGTGACAAAG  875

seq1  CAGAGTGCACACACTCTTCTAGAGTAGAGTACCTTAAAGTTCACAGTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCACACACTCTTCTAGAGTAGAGTACCTTAAAGTTCACAGTGCA  925

seq1  TAGACACTGAGTGGAGATCTATCAGAGTGTATGAGGACCAGATCCACAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTGAGTGGAGATCTATCAGAGTGTATGAGGACCAGATCCACAGA  975

seq1  AGAAAAGAGGCATGGGTTAGGATATATAAATATATGCATGTGTTAAAAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGGCATGGGTTAGGATATATAAATATATGCATGTGTTAAAAGA  1025

seq1  CATTTGTGTTCTGGTTTTTTTCCTTTTATTCTTCTGTGTTAAAGATTTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTTCTGGTTTTTTTCCTTTTATTCTTCTGTGTTAAAGATTTAT  1075

seq1  TTATTTAATTTATATATATGAGTACACCATTGCTCTCTTCAGACACACCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAATTTATATATATGAGTACACCATTGCTCTCTTCAGACACACCA  1125

seq1  GAAGAGGGCATCAGATTCTATTACAGATGGTTGTGAGCCACCATGTGGTT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCATCAGATTCTATTACAGATGGTTGTGAGCCACCATGTGGTT  1175

seq1  GCTGGGAATTGAATTC  1216
      ||||||||||||||||
seq2  GCTGGGAATTGAATTC  1191


seq1: chr1_128092064_128092539
seq2: B6Ng01-328P17.g_67_542

seq1  GAATTCACACTGGAGGAAGTGGGTCACTGAGGATGGAATTTTTATAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTGGAGGAAGTGGGTCACTGAGGATGGAATTTTTATAGCCT  50

seq1  GGCCAGGCTTCCTACTTGTCCTCTGTTTGCTGGCTCTGTATGACCTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGCTTCCTACTTGTCCTCTGTTTGCTGGCTCTGTATGACCTTACA  100

seq1  GCTTCCTGCTCTTGATGCCAGCCTTCCCTCAACAACATGGACTGGATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGCTCTTGATGCCAGCCTTCCCTCAACAACATGGACTGGATCTC  150

seq1  CTTGAGTTATCGGCCAAAACAAACACTTCCTGTCTTCCCTGGATCATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTATCGGCCAAAACAAACACTTCCTGTCTTCCCTGGATCATGGC  200

seq1  ACAGATTTTTGTTGGAGGAACAAAAAGAATATTAAGATTCTTGGTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTTTGTTGGAGGAACAAAAAGAATATTAAGATTCTTGGTGACAA  250

seq1  ATTGCATCTGAAGGAGTAAATTCATTGCTTAAAAGTTCAAAGAAACTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCTGAAGGAGTAAATTCATTGCTTAAAAGTTCAAAGAAACTCTC  300

seq1  AGAATCCACAGTGGCTAGGATGCATTAGGATGCATTCTTATGGAACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCACAGTGGCTAGGATGCATTAGGATGCATTCTTATGGAACATTT  350

seq1  TCCCTTCATGCAGAAGGAAGAAGACCCTTTCCATTTTGCCATTCGGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCATGCAGAAGGAAGAAGACCCTTTCCATTTTGCCATTCGGATTC  400

seq1  AGAAGAAAGTAAAACTCCTCTTTACTAGAATATGCCCGTGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGTAAAACTCCTCTTTACTAGAATATGCCCGTGTGTGTGTGTG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTG  476
      ||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTG  476


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