BAC Information

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BAC

Clone NameB6Ng01-329A15
Chromosome1 (Build37)
Map Location 129,122,120 - 129,123,145
singlet/doubletsinglet
Overlap geneMgat5
Upstream geneE030049G20Rik, LOC383559
Downstream geneLOC667090, Tmem163, Acmsd, Ccnt2, Ysk4, Rab3gap1, Zranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329A15.bB6Ng01-329A15.g
ACCGA116130GA116131
length1,0141,195
definitionB6Ng01-329A15.b B6Ng01-329A15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattggtaactaaacccataggactacgaaggggaaatgtgtga
ctattcaaccccaatattttttgaaatactgagaaactgggtctggggat
gtggctcagttggtagagtgcttgccttgcatgcagagtcctgggtttag
tctccagcactgcgtaaaccaggcatggtggtgcaaagctgtaactgcag
ccctcaggaggtagaagcaggaggatcaggagttcaaagtcatcctccct
tatgcagtgagttcaagaccagcctgcacagcatgagaccagaggcaatg
gggagcaaggggaaggcgagaaggcacaagcttgataacctgagttatta
agttatcagtaccaggaaccaagtctcagcggttgttcttggacctccgt
atgcataccacggcactcagtcataaagaaaaatttaaggaaaaaaaaac
tgctattgctataaccattaaatgtggctgcttggggtatcagtgttagg
cgcatgaagatcattccttaccaaactctaaataccagcttagaagctga
ggagttaaagatgctcatggctcagcaatggctctgtgtctaatgaacag
caaacagcattgggctgtagcaaagtcacttcctactgagagaagtatct
agaacagctcaggaagatctcctgtggcaaagagaagtttctaaatgaca
cactcctagaaatccacttatcgtgaaaacccagcacctcagaggctgga
ctcagttggtggctaactggcaaccaggaggaaacatttccctggagctc
tgtgtggacctacacccaagttctcactcatgggatatggccttgcccct
aagccttgtggttaaaagaaaagtgctctgttctccatagtcatttttga
aacagtcttgggcacaggtatgtatttgggtttttgttttaaatcttacc
attcctaatgtatatatgcattttatctccctcaatgagtatttcaataa
aggggtggtgtgtg
gaattcaatgaaaatgaatgcacaacataaccaatcttatgggacataat
gaaaaaagtgctaagaggaaagtttatagcactaagtgccatgtaaaaaa
attagatctcatgctagcaacttaataacacatctgaaacctcttgaaga
aaaagaagcatacacacctaagaggaatagatggcaggaaataatcaaac
tgacagatgaaaccaataaaatagaaacaaggaaaacaatacacagaatc
aatgaaactaagaattgattctttgagaaaatcaacaagatagacaaact
cttatccaaactaactaaaagacatagaatatccaaattaactaaatcag
aaatgaaaagggagacataacaacagacaccaagaaaatcaaaaacctgt
tctccacaaaaaaaggggggggagaaatggacccttctctcaatagatac
ccaaggaaataaaagcagttattaaaagtctcaggaacagatcgttttag
cacagaactctaccagactttcaaaggagagctaatgtcaataatcctca
cattattccaaaaagagaaacagaaggaacattgctaaattcattttatg
aggccacaatcacctttattccacaaagacagagaattgcagatctatat
tcctcatgaacatatacagaattactcaacaaaatacttggaaacaaaac
tccaagaacacatcaaagagatcacccaccatgattaagtaggattcacc
aagaggtgccggaatattttccattcatgaaaaccagcaaatgtaatcca
aactgaaagaaaaaacacacacacacaatcatctcattacatgctgaaaa
aaagcctttgacaaaatccaacacccattcatatttaaaggcttggagat
aagggatacaaggaacattcctaaagatacaaagtgaatttacagcaagc
ctatagccaacatcaattaattgaagagaaattaagcatttctttttaat
tagaacaaaacaaggctgtccacctctcctccatattctattcagcaaaa
ggacttgaagttcttagcttagagcattagaccacttaagggagattcag
ggcaatacaaattgcaaagaagaattctaaggtatgccattccacagact
ggtattggatagtatacaatacgcgttaactccttaaaaaagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_129122120_129123145
seq2: B6Ng01-329A15.b_42_1055 (reverse)

seq1  CACACACACACCCCTTTA-TGAAATACTTCATTGAGGGAGATTAAAAATG  49
      ||||||| |||||||||| |||||||| ||||||||||||||  ||||||
seq2  CACACAC-CACCCCTTTATTGAAATAC-TCATTGAGGGAGAT--AAAATG  46

seq1  CATTATATACATTAGGAAATGGTTAAAGAATTTAAAAACAAAAAACCAAA  99
      || ||||||||||||| ||||||  ||||  || |||||||||| |||||
seq2  CA-TATATACATTAGG-AATGGT--AAGA--TTTAAAACAAAAACCCAAA  90

seq1  TACATACCTTGTTGCCCAAGACTTGTTTCAAAAATGACTATGGAGAACAG  149
      |||||||||   |||||||||| |||||||||||||||||||||||||||
seq2  TACATACCT--GTGCCCAAGAC-TGTTTCAAAAATGACTATGGAGAACAG  137

seq1  AGCACTTTTCTTTTAACCACAAGGCTTAGGGGCAAGGCCATATCCCATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTTCTTTTAACCACAAGGCTTAGGGGCAAGGCCATATCCCATGA  187

seq1  GTGAGAACTTGGGTGTAGGTCCACACAGAGCTCCAGGGAAATGTTTCCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACTTGGGTGTAGGTCCACACAGAGCTCCAGGGAAATGTTTCCTC  237

seq1  CTGGTTGCCAGTTAGCCACCAACTGAGTCCAGCCTCTGAGGTGCTGGGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGCCAGTTAGCCACCAACTGAGTCCAGCCTCTGAGGTGCTGGGTT  287

seq1  TTCACGATAAGTGGATTTCTAGGAGTGTGTCATTTAGAAACTTCTCTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGATAAGTGGATTTCTAGGAGTGTGTCATTTAGAAACTTCTCTTTG  337

seq1  CCACAGGAGATCTTCCTGAGCTGTTCTAGATACTTCTCTCAGTAGGAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGAGATCTTCCTGAGCTGTTCTAGATACTTCTCTCAGTAGGAAGT  387

seq1  GACTTTGCTACAGCCCAATGCTGTTTGCTGTTCATTAGACACAGAGCCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGCTACAGCCCAATGCTGTTTGCTGTTCATTAGACACAGAGCCAT  437

seq1  TGCTGAGCCATGAGCATCTTTAACTCCTCAGCTTCTAAGCTGGTATTTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCCATGAGCATCTTTAACTCCTCAGCTTCTAAGCTGGTATTTAG  487

seq1  AGTTTGGTAAGGAATGATCTTCATGCGCCTAACACTGATACCCCAAGCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGTAAGGAATGATCTTCATGCGCCTAACACTGATACCCCAAGCAG  537

seq1  CCACATTTAATGGTTATAGCAATAGCAGTTTTTTTTTCCTTAAATTTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTAATGGTTATAGCAATAGCAGTTTTTTTTTCCTTAAATTTTTC  587

seq1  TTTATGACTGAGTGCCGTGGTATGCATACGGAGGTCCAAGAACAACCGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACTGAGTGCCGTGGTATGCATACGGAGGTCCAAGAACAACCGCT  637

seq1  GAGACTTGGTTCCTGGTACTGATAACTTAATAACTCAGGTTATCAAGCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGGTTCCTGGTACTGATAACTTAATAACTCAGGTTATCAAGCTT  687

seq1  GTGCCTTCTCGCCTTCCCCTTGCTCCCCATTGCCTCTGGTCTCATGCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTCTCGCCTTCCCCTTGCTCCCCATTGCCTCTGGTCTCATGCTGT  737

seq1  GCAGGCTGGTCTTGAACTCACTGCATAAGGGAGGATGACTTTGAACTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGGTCTTGAACTCACTGCATAAGGGAGGATGACTTTGAACTCCT  787

seq1  GATCCTCCTGCTTCTACCTCCTGAGGGCTGCAGTTACAGCTTTGCACCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCTGCTTCTACCTCCTGAGGGCTGCAGTTACAGCTTTGCACCAC  837

seq1  CATGCCTGGTTTACGCAGTGCTGGAGACTAAACCCAGGACTCTGCATGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGTTTACGCAGTGCTGGAGACTAAACCCAGGACTCTGCATGCA  887

seq1  AGGCAAGCACTCTACCAACTGAGCCACATCCCCAGACCCAGTTTCTCAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCACTCTACCAACTGAGCCACATCCCCAGACCCAGTTTCTCAGT  937

seq1  ATTTCAAAAAATATTGGGGTTGAATAGTCACACATTTCCCCTTCGTAGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAAATATTGGGGTTGAATAGTCACACATTTCCCCTTCGTAGTC  987

seq1  CTATGGGTTTAGTTACCAATGGAATTC  1026
      |||||||||||||||||||||||||||
seq2  CTATGGGTTTAGTTACCAATGGAATTC  1014