BAC Information

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BAC

Clone NameB6Ng01-329O07
Chromosome1 (Build37)
Map Location 73,105,184 - 73,204,865
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329O07.bB6Ng01-329O07.g
ACCGA116729GA116730
length1,1521,102
definitionB6Ng01-329O07.b B6Ng01-329O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,105,184 - 73,106,322)(73,203,783 - 73,204,865)
sequence
gaattcaatcttaactctcatatatactagctggacactgagtctcctcc
tctagaccataagagtgaggatattaatgaaggtctgctgagaaaaggca
tgaggtcacatgttaggttaaacagtgtcaagttctagtctatataatag
atatgtcctctcctcctcttcctgttcttcttctcccttcttctcctccc
tctcatttccatgtcaattttctcttccttagcatctttctgaattgatg
gtcctagtcaaaaagaacattagataagacaacaggagaaccaactgtgt
aggaaaaaggcagctagacatcacctccatgtctaaattcagcatcaatg
atctggcttgttaaagggaagttatttgtcacccaggtgcctagggagga
gggtttcttgttcaagttgcataaaagttattagagagataagcctgaaa
aaagttgctatctggtgccagagaggccaagcacagataaaaagggacaa
ggaacagggagacagatggaaggttaaagtccaggaagcagagggtaaag
gacagatggacatgcttaggagcagagtcctcccaaggaacactattcca
acagcagctttttgggtattgactttcagggaaagctttctaaaagctga
gaagggtgtttggctctctaaaggctagacacttagatttatcattctct
ctccagtggttttgcttagagctcttaggaactgagaaatcatcttatgt
tatcagtaggtagaatggaaatcccatagacatgacaggacctgctctca
accttattgaccagaactgggcagctagaatgtatgtatgtatatgtatg
cttgtatgtacacgtgcttgtgtatatgagggtgcacatgtgtgtgctta
tgaaaggttagatagagaatgaatgtccttggattccatctttttttttt
cccacaagccccaggattcttgttctgtcttctgcctccctgtcaacgga
actagaagcatgagccataacacttcagcttttttatttttttattatgg
ctttcttggcaaattgaacgcagtcttatccttgcaaggcattcactttt
gctgactgactgacctcttctctatccggtcaagaaatggtgcatgtagc
ct
gaattcttcacagcctcagccaaacctaaccctgagacccttatggctca
tctctctccaaatctcaactctgctcgtcctcagagtctacgtagataca
taacagaccctcgacttctaaagccgtcaccagactgcccagagccactt
tattctctaagcctctccatcctactcattcctaacacaacaacactggt
cacagaggtatctacaccagcaattcagaagaaaaaggtggcattggaaa
tgggaggcaatgaggagtagggtggagactttagagtcagaacccagatc
atgaggtagggcaagggagctgctgatgctggcatgccgaaattcccatt
tgcttgtgtaactttcagcggtagctggggggaggctagttcaggcagct
atgcgaatgtgccctcctgacttacaacgagcagcatctgagcacattgg
gaggggattctaagtagggatgtggggctcgccagacttagtctctctat
ccaccctgattctaagagtctcagccacacaggtctagacaatatggctt
ctttgccactcctcagactccgctgtcatggacagacccatttctaactg
ttccctctcaagaacgtgggtttgggggggtcagacaacggtggcttcaa
atacatttactcactgttaatttattgtcatttattctagaacatgttgt
cttctctcattgaaatagattgtttttcaataaatatattccgattaatg
gctttcccctcacccaccttctctgagaccctctccacctcttttcttat
ctatatccttccacccaaactcacattctttattttttcctctctcatta
gtaatcagacatttagaaagtaataataatataaaataaaagtaatcttg
ggtttcaaatgtgaccatggagagtacacgaaaggtctggtactgtcctc
atgaaattggtgtctttttgtccctcctccctggcttggtggtccttcac
tctaacctcattcaaggaactccgggaggaaaccctggtgtttactaggt
taggacttcaggaaataatttctggagatttcctgggggtggtggagcct
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73105184_73106322
seq2: B6Ng01-329O07.b_46_1197

seq1  GAATTCAATCTTAACTCTCATATATACTAGCTGGACACTGAGTCTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTAACTCTCATATATACTAGCTGGACACTGAGTCTCCTCC  50

seq1  TCTAGACCATAAGAGTGAGGATATTAATGAAGGTCTGCTGAGAAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACCATAAGAGTGAGGATATTAATGAAGGTCTGCTGAGAAAAGGCA  100

seq1  TGAGGTCACATGTTAGGTTAAACAGTGTCAAGTTCTAGTCTATATAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCACATGTTAGGTTAAACAGTGTCAAGTTCTAGTCTATATAATAG  150

seq1  ATATGTCCTCTCCTCCTCTTCCTGTTCTTCTTCTCCCTTCTTCTCCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCCTCTCCTCCTCTTCCTGTTCTTCTTCTCCCTTCTTCTCCTCCC  200

seq1  TCTCATTTCCATGTCAATTTTCTCTTCCTTAGCATCTTTCTGAATTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCCATGTCAATTTTCTCTTCCTTAGCATCTTTCTGAATTGATG  250

seq1  GTCCTAGTCAAAAAGAACATTAGATAAGACAACAGGAGAACCAACTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGTCAAAAAGAACATTAGATAAGACAACAGGAGAACCAACTGTGT  300

seq1  AGGAAAAAGGCAGCTAGACATCACCTCCATGTCTAAATTCAGCATCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGGCAGCTAGACATCACCTCCATGTCTAAATTCAGCATCAATG  350

seq1  ATCTGGCTTGTTAAAGGGAAGTTATTTGTCACCCAGGTGCCTAGGGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTTGTTAAAGGGAAGTTATTTGTCACCCAGGTGCCTAGGGAGGA  400

seq1  GGGTTTCTTGTTCAAGTTGCATAAAAGTTATTAGAGAGATAAGCCTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTTGTTCAAGTTGCATAAAAGTTATTAGAGAGATAAGCCTGAAA  450

seq1  AAAGTTGCTATCTGGTGCCAGAGAGGCCAAGCACAGATAAAAAGGGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGCTATCTGGTGCCAGAGAGGCCAAGCACAGATAAAAAGGGACAA  500

seq1  GGAACAGGGAGACAGATGGAAGGTTAAAGTCCAGGAAGCAGAGGGTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGGAGACAGATGGAAGGTTAAAGTCCAGGAAGCAGAGGGTAAAG  550

seq1  GACAGATGGACATGCTTAGGAGCAGAGTCCTCCCAAGGAACACTATTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGGACATGCTTAGGAGCAGAGTCCTCCCAAGGAACACTATTCCA  600

seq1  ACAGCAGCTTTTTGGGTATTGACTTTCAGGGAAAGCTTTCTAAAAGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCTTTTTGGGTATTGACTTTCAGGGAAAGCTTTCTAAAAGCTGA  650

seq1  GAAGGGTGTTTGGCTCTCTAAAGGCTAGACACTTAGATTTATCATTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGTTTGGCTCTCTAAAGGCTAGACACTTAGATTTATCATTCTCT  700

seq1  CTCCAGTGGTTTTGCTTAGAGCTCTTAGGAACTGAGAAATCATCTTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGGTTTTGCTTAGAGCTCTTAGGAACTGAGAAATCATCTTATGT  750

seq1  TATCAGTAGGTAGAATGGAAATCCCATAGACATGACAGGACCTGCTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAGGTAGAATGGAAATCCCATAGACATGACAGGACCTGCTCTCA  800

seq1  ACCTTATTGACCAGAACTGGGCAGCTAGAATGTATGTATGTATATGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTGACCAGAACTGGGCAGCTAGAATGTATGTATGTATATGTATG  850

seq1  CTTGTATGTACACGTGCTTGTGTATATGAGGGTGCACATGTGTGTGCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTACACGTGCTTGTGTATATGAGGGTGCACATGTGTGTGCTTA  900

seq1  TG-AAGGTTAGATAGAGAATGAATGTCCTTGGATTCCATCTTTTTTTTTT  949
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTTAGATAGAGAATGAATGTCCTTGGATTCCATCTTTTTTTTTT  950

seq1  CCCAACAAGCCCCAGGAATCT--GTCTGTC-TCTGCCTCCCTGTCAACGG  996
      ||| ||||||||||||| |||   |||||| |||||||||||||||||||
seq2  CCC-ACAAGCCCCAGGATTCTTGTTCTGTCTTCTGCCTCCCTGTCAACGG  999

seq1  AACTAGAAGCATGAGCCATTACAC-TCAGC-TTTTTATTTTT---ATATG  1041
      ||||||||||||||||||| |||| ||||| |||||||||||    ||||
seq2  AACTAGAAGCATGAGCCATAACACTTCAGCTTTTTTATTTTTTTATTATG  1049

seq1  GCTT--CTGGC-AATTGAACGCAGGTCCTTATCCTTGCAAGGCA-TCAC-  1086
      ||||   |||| ||||||||||||   ||||||||||||||||| |||| 
seq2  GCTTTCTTGGCAAATTGAACGCAG--TCTTATCCTTGCAAGGCATTCACT  1097

seq1  TTTGCTGACTGACTGACC---TCTCTATCCGGTCAGGGAAATGTGGAAGG  1133
      ||||||||||||||||||   ||||||||||||||  ||||||  | | |
seq2  TTTGCTGACTGACTGACCTCTTCTCTATCCGGTCA-AGAAATGGTGCATG  1146

seq1  TAGCCT  1139
      ||||||
seq2  TAGCCT  1152

seq1: chr1_73203783_73204865
seq2: B6Ng01-329O07.g_68_1169 (reverse)

seq1  TTAGGCT----CACACCCAGGAAATCT-CAGAAATTATTT-CTGAAGT-C  43
      |||||||    ||| |||||||||||| |||||||||||| ||||||| |
seq2  TTAGGCTCCACCACCCCCAGGAAATCTCCAGAAATTATTTCCTGAAGTCC  50

seq1  TAA-CTAGT-AACACCAGGTTTTCCTCC--GGGTTCCT--GATGAGGTTA  87
      ||| ||||| ||||||||| ||||||||  | ||||||   |||||||||
seq2  TAACCTAGTAAACACCAGGGTTTCCTCCCGGAGTTCCTTGAATGAGGTTA  100

seq1  GAGTGAAGGAC--ACAAGCCAGGGAGGA-GGAC-AAAAGACACCAATTTC  133
      |||||||||||   |||||||||||||| |||| ||||||||||||||||
seq2  GAGTGAAGGACCACCAAGCCAGGGAGGAGGGACAAAAAGACACCAATTTC  150

seq1  ATGAGGACAGTACCAGACCTTTCGTGTACTCTCCATGGTCACATTTGAAA  183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGACAGTACCAGACCTTTCGTGTACTCTCCATGGTCACATTTGAAA  200

seq1  -CCAAGATTACTTTTATTTTATATTATTATTACTTTCTAAATGTCTGATT  232
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGATTACTTTTATTTTATATTATTATTACTTTCTAAATGTCTGATT  250

seq1  ACTAATGAGAGAGG-AAAAATAAAGAATGTGAGTTTGGGTGGAAGGATAT  281
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACTAATGAGAGAGGAAAAAATAAAGAATGTGAGTTTGGGTGGAAGGATAT  300

seq1  AGATAAGAAAAGAGGTGGAGAGGGTCTCAGAGAAGGTGGGTGAGGGGAAA  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGAAAAGAGGTGGAGAGGGTCTCAGAGAAGGTGGGTGAGGGGAAA  350

seq1  GCCATTAATCGGAATATATTTATTGAAAAACAATCTATTTCAATGAGAGA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAATCGGAATATATTTATTGAAAAACAATCTATTTCAATGAGAGA  400

seq1  AGACAACATGTTCTAGAATAAATGACAATAAATTAACAGTGAGTAAATGT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACATGTTCTAGAATAAATGACAATAAATTAACAGTGAGTAAATGT  450

seq1  ATTTGAAGCCACCGTTGTCTGACCCCCCCAAACCCACGTTCTTGAGAGGG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGCCACCGTTGTCTGACCCCCCCAAACCCACGTTCTTGAGAGGG  500

seq1  AACAGTTAGAAATGGGTCTGTCCATGACAGCGGAGTCTGAGGAGTGGCAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAGAAATGGGTCTGTCCATGACAGCGGAGTCTGAGGAGTGGCAA  550

seq1  AGAAGCCATATTGTCTAGACCTGTGTGGCTGAGACTCTTAGAATCAGGGT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCATATTGTCTAGACCTGTGTGGCTGAGACTCTTAGAATCAGGGT  600

seq1  GGATAGAGAGACTAAGTCTGGCGAGCCCCACATCCCTACTTAGAATCCCC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGAGAGACTAAGTCTGGCGAGCCCCACATCCCTACTTAGAATCCCC  650

seq1  TCCCAATGTGCTCAGATGCTGCTCGTTGTAAGTCAGGAGGGCACATTCGC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGTGCTCAGATGCTGCTCGTTGTAAGTCAGGAGGGCACATTCGC  700

seq1  ATAGCTGCCTGAACTAGCCTCCCCCCAGCTACCGCTGAAAGTTACACAAG  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCCTGAACTAGCCTCCCCCCAGCTACCGCTGAAAGTTACACAAG  750

seq1  CAAATGGGAATTTCGGCATGCCAGCATCAGCAGCTCCCTTGCCCTACCTC  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGGAATTTCGGCATGCCAGCATCAGCAGCTCCCTTGCCCTACCTC  800

seq1  ATGATCTGGGTTCTGACTCTAAAGTCTCCACCCTACTCCTCATTGCCTCC  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGGGTTCTGACTCTAAAGTCTCCACCCTACTCCTCATTGCCTCC  850

seq1  CATTTCCAATGCCACCTTTTTCTTCTGAATTGCTGGTGTAGATACCTCTG  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAATGCCACCTTTTTCTTCTGAATTGCTGGTGTAGATACCTCTG  900

seq1  TGACCAGTGTTGTTGTGTTAGGAATGAGTAGGATGGAGAGGCTTAGAGAA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTGTTGTTGTGTTAGGAATGAGTAGGATGGAGAGGCTTAGAGAA  950

seq1  TAAAGTGGCTCTGGGCAGTCTGGTGACGGCTTTAGAAGTCGAGGGTCTGT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGGCTCTGGGCAGTCTGGTGACGGCTTTAGAAGTCGAGGGTCTGT  1000

seq1  TATGTATCTACGTAGACTCTGAGGACGAGCAGAGTTGAGATTTGGAGAGA  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCTACGTAGACTCTGAGGACGAGCAGAGTTGAGATTTGGAGAGA  1050

seq1  GATGAGCCATAAGGGTCTCAGGGTTAGGTTTGGCTGAGGCTGTGAAGAAT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCCATAAGGGTCTCAGGGTTAGGTTTGGCTGAGGCTGTGAAGAAT  1100

seq1  TC  1083
      ||
seq2  TC  1102