MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-329O20
Chromosome	1 (Build37)
Map Location	17,728,876 - 17,730,005
singlet/doublet	singlet
Overlap gene	Crispld1
Upstream gene	LOC100040056, LOC665496, EG545306, Jph1, Gdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15
Downstream gene	LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17, LOC383499
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC665496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG545306 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins

name	Jph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57339 MGI:1891495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14545 MGI:1338002
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Rbm6-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108212 MGI:1889580
definition	note : RNA binding motif protein 6, pseudogene 1 pseudo : _no_value

name	Ppia-ps1_125.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606716
definition	note : peptidylprolyl isomerase A pseudogene 1_125.1 pseudo : _no_value

name	Pi15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94227 MGI:1934659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crispld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Crisp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG574082 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	EG654460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Defb17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	EG545306 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233619 GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins product : predicted gene, EG545306 transcript_id : XM_619609.4

name	Jph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10181139 GeneID:57339 MGI:1891495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junctophilin 1 transcript_id : NM_020604.1

name	Gdap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981767 GeneID:14545 MGI:1338002
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ganglioside-induced differentiation-associated-protein 1 transcript_id : NM_010267.2

name	Pi15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716490 GeneID:94227 MGI:1934659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidase inhibitor 15 transcript_id : NM_053191.1

name	Crispld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173745 GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein LCCL domain containing 1 transcript_id : NM_031402.2

name	Crisp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88595370 GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 4 transcript_id : NM_030033.1

name	EG654460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84993771 GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG654460 transcript_id : NM_001039123.1

name	Defb17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:91064862 GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : defensin beta 17 transcript_id : NM_001040027.1

name	EG545306 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233620 GeneID:545306 MGI:3644176
definition	codon_start : 1 product : similar to mKIAA0737 protein protein_id : XP_619609.4

name	Jph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181140 CCDS:CCDS14833.1 GeneID:57339 MGI:1891495
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0016529 - sarcoplasmic reticulum [Evidence TAS]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0008307 - structural constituent of muscle [Evidence IMP] GO_process : GO:0007517 - muscle development [Evidence IMP] codon_start : 1 note : junctophilin type 1; mitsugumin72 product : junctophilin 1 protein_id : NP_065629.1

name	Gdap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753964 CCDS:CCDS14834.1 GeneID:14545 MGI:1338002
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : ganglioside-induced differentiation-associated-protein 1 protein_id : NP_034397.1

name	Pi15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716491 GeneID:94227 MGI:1934659
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : cysteine-rich secreted protein product : protease inhibitor 15 protein_id : NP_444421.1

name	Crispld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173746 GeneID:83691 MGI:1934666
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : LCCL domain containing cysteine-rich secretory protein 1 product : cysteine-rich secretory protein LCCL domain containing 1 protein_id : NP_113579.2

name	Crisp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88595371 CCDS:CCDS14835.1 GeneID:78081 MGI:1925331
definition	codon_start : 1 product : cysteine-rich secretory protein 4 protein_id : NP_084309.1

name	EG654460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993772 GeneID:654460 MGI:3648148
definition	codon_start : 1 product : defensin beta 18 protein_id : NP_001034212.1

name	Defb17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:91064863 GeneID:654464
definition	codon_start : 1 product : defensin beta 17 protein_id : NP_001035116.1

name	LOC100040056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040056
definition	number : 1 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 2 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 1 pseudo : _no_value

name	LOC665564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665564
definition	number : 1 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 5 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 4 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 3 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 2 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 1 pseudo : _no_value

name	LOC383499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383499
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128505
definition	standard_name : D1Mit168

name	(CDS detail)
type	STS
link
xref	UniSTS:21341
definition	standard_name : WI-18724

name	(CDS detail)
type	STS
link
xref	UniSTS:207131
definition	standard_name : BE136390

name	(CDS detail)
type	STS
link
xref	UniSTS:163202
definition	standard_name : RH126494

name	(CDS detail)
type	STS
link
xref	UniSTS:125442
definition	standard_name : MHAa88h1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128575
definition	standard_name : D1Mit230

name	LOC383495 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233627 GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : hypothetical LOC383495 pseudo : _no_value transcript_id : XR_031682.1

name	EG574082 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:124517712 GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG574082 pseudo : _no_value transcript_id : NR_002879.2

clone name	MSMg01-356E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-407J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-308H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046H17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-329O20.b	B6Ng01-329O20.g
ACC	GA116752	GA116753
length	1,194	1,129
definition	B6Ng01-329O20.b	B6Ng01-329O20.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaatggggttttttgatt ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccactaagatttgaccttagtacaaggagataagtatggatcgattcag attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaac gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcttaggttttttgttattccagatg aatttgcagattgctctttctaatttgttgaagaattgagttggaatttt gatgggattgcattgaatctgtagattgcttttggcatgatagccatttt tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc tgagaccttcttcaatttctttcttcagagacttgaagtttttatcatac agatctttcacttccttaagtcaaaccaagatattttatattatttgtga ctattgagaaggatgttgtttccctaatttctttctcagcctgtatattc tttgtgtagagaaagccattacttgtttgagtaattttatatccagctac ttcaccgaagcttgttattcaaggtttagggagttcttctgggtgattta aggttcactcatatatactatcaattcagtctggcaaacgtgaatttgac tcgctttccaagtttgtatatccctgggaactctccctttatga	gaattctttttgtgagggctatgaccttttaatagactttctggtaaacc aaagactacattgccttcattacattactacaaacaatgcctttattatt tgtattgatgttttattaaaatgggagtagtatagaatggggatatagtt tggccagccattctagttgaatctgtgagttcaagggacagtgatacttt gtctcaaaaataaaatgattagtgataaagacactcagtgttgacctcca gccttcacatgcacacagtctcacacacacacacacacacacacacacac acacacacacagacacaccgaggcatacacacatacagatatatacacaa acatatacacatatgtgtatacaatcacaaatgttatacacacaaactaa acaggcaaaaaataacaatataacttgttggtcctttacatcttcatcag tgaatatgggatcaatttctgtcaatgaatttcttcattaggtatattat atataagcccagtaaattttagaaatgaatttcattaatcgtatttatat cccaacaagttttagaaagtcaaatctagaaaaatgcatgatgcaaaaaa ttctcacaataaattatagtatctatttacatattgtattatttattttg ctcatcactgggatcaaagaagttgtcagaaacaatgtcaaaaaggacat atttattttggatcaggtttctgagaatcatagtccataggaaggtatgg tagagcagctggactatatagctggactatatagcagagtgaccagaaag cagtagcttgttacatggctgcaactagaaagggagtgagccaaatggga acctgaagtgagcatggccatcaagtcccttaatggcctctctctgtcat ctgggcctccatgtgacaaagctcttctaacctcccagaggagcatcatt taactgatggccaaatgtaaacagatgagatttggggttgcatttcacac caacctgtaacaaatagcattaacttgggttttaaagggtaagggaaacg ctaatctttctaatttacctgctttgtgaaccagcttttatatattgaat tgaataaattgaaaacttctccttgatta
quality values	Open. Hide. 58 26 19 35 58 58 58 58 58 49 58 58 25 18 62 62 62 62 54 62 62 62 62 62 62 62 47 62 62 62 62 62 47 56 62 54 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 54 62 54 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 43 62 62 62 62 38 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 58 58 58 43 54 54 58 58 58 58 58 58 45 38 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 54 54 54 58 58 58 54 58 58 49 49 54 58 58 54 58 54 58 58 58 58 54 58 58 58 54 42 52 58 58 49 49 58 58 54 58 54 58 58 58 58 58 58 58 58 51 58 51 58 51 58 49 58 46 51 50 54 58 43 58 48 58 58 58 58 51 54 58 58 58 48 53 58 53 53 54 47 58 58 54 58 58 58 58 58 58 51 58 53 51 58 58 58 54 49 58 54 43 53 35 49 42 50 52 41 58 50 51 50 58 58 46 58 39 35 47 37 44 35 43 44 40 53 46 12 58 50 50 52 50 58 58 50 53 52 50 43 44 50 49 39 24 58 50 39 54 30 50 58 58 58 54 49 40 42 52 52 52 50 40 53 18 35 40 54 36 36 36 54 54 39 52 40 41 52 37 44 37 38 46 32 49 46 46 49 54 51 51 40 52 37 53 42 51 49 33 42 47 47 49 49 52 39 32 46 46 54 47 49 39 51 41 51 51 31 51 37 32 54 47 53 31 47 54 46 34 41 37 32 49 51 46 52 45 35 18 5 5 8 22 53 41 32 33 32 34 52 47 45 32 43 45 52 32 52 31 31 27 32 52 33 32 46 51 31 36 41 30 32 36 42 42 36 43 39 31 31 29 40 51 51 51 30 31 31 26 36 31 45 24 31 35 31 29 20 43 31 45 25 40 26 31 32 26 32 27 31 43 37 20 31 27 32 41 46 46 33 26 31 26 31 31 41 40 21 32 25 31 31 32 32 27 28 32 42 23 41 14 14 29 30 33 37 31 35 32 31 32 48 31 31 31 46 30 32 31 28 32 32 21 41 19 31 27 25 31 26 32 42 33 44 46 47 48 43 32 22 22 21 37 31 29 26 33 26 31 19 15 47 31 20 22 24 33 24 13 14 20 18 11 22 32 36 32 25 36 31 18 13 14 31 33 26 24 29 31 44 43 19 20 32 30 14 22 28 10 29 12 30 19 22 32 28 32 19 22 14 31 32 32 32 25 24 22 20 14 31 22 15 31 24 47 19 18 36 22 19 21 10 18 43 13 20 24 48 23 22 26 24 27 10 17 18 15 28 15 16 15 8 16 8 22 20 38 23 14 6 17 8 10 16 23 17 15 30 11 3 3 8 8 13 15 10 20 18 10 7 7 34 14 13 7 4 16 3 11 9 34 38 27 24 24 20 16 8 18 24 22 26 28 19 11 17 16 15 9 8 17 12 24 26 16 11 9 9 6 4 3 10 8 10 8 5 5 15 11 13 28 17 23 15 10 7 7 5 15 13 13 8 5 6 7 18 18 5 4 3 3 3 13 23 4 6 13 12 4 6 17 7 4 9 9 11 7 9 7 6 5 6 14 6 8 5 6 5 5 4 6 10 2 2 2 5 4 7 2 4 9 3 3 1 2 5 5 2 5 4 13 6 3 2 6 8 3 1 2 2 3 3 1 6 4 2 1 2 5 7 5 4 10 7 8 7 18 28 12 2 6 5 4 3 6 6 5 5 7 19 18 7 5 25 4 1 2 2 1	Open. Hide. 62 47 42 47 62 62 62 62 62 62 62 62 43 49 62 59 62 49 62 62 62 62 59 59 59 62 62 62 49 54 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 59 59 62 54 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 54 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 56 62 56 62 56 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 52 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 58 58 58 58 58 54 52 46 58 58 58 58 58 58 58 58 58 58 58 54 58 45 58 48 58 58 58 54 58 58 54 58 58 58 58 58 54 54 58 54 58 58 45 48 54 58 58 58 58 58 58 54 48 54 52 58 54 47 45 58 58 52 48 58 58 54 54 54 58 54 54 58 58 58 54 54 58 58 58 54 58 54 58 58 58 54 49 54 58 41 49 58 58 58 58 58 51 50 58 58 58 58 51 51 50 58 58 58 50 58 54 48 58 58 58 58 49 41 58 51 53 52 58 58 43 58 54 41 49 58 58 58 53 39 54 52 51 41 53 52 46 58 51 58 58 44 44 58 58 37 58 51 51 58 48 58 49 52 43 49 50 54 53 53 58 51 54 58 58 46 52 39 43 51 49 58 52 51 41 54 54 51 51 51 50 53 39 53 53 45 38 28 51 58 44 29 37 50 34 58 42 27 58 47 32 53 58 50 42 53 52 35 58 43 35 40 32 44 41 54 52 52 39 33 33 33 37 25 51 35 35 37 52 32 53 54 44 35 35 49 53 39 50 29 44 37 39 30 9 44 36 54 35 40 40 39 51 14 54 34 39 40 40 45 39 26 37 37 38 37 52 42 18 54 51 33 16 49 19 33 33 42 51 31 53 39 53 25 39 45 24 45 33 27 40 22 29 43 52 34 32 32 28 32 45 39 29 40 24 29 37 32 32 39 39 28 29 32 52 25 46 17 34 34 32 38 26 43 21 46 46 22 24 31 33 13 32 29 13 30 19 32 40 18 31 29 25 17 30 16 24 23 34 30 31 25 14 24 37 32 27 33 46 22 7 41 22 31 18 32 32 32 21 18 31 30 46 29 21 43 46 32 10 31 16 17 20 31 29 26 26 34 36 31 26 31 35 36 42 38 14 9 16 31 32 18 30 31 30 32 48 37 28 27 23 39 26 31 20 12 19 24 31 36 32 29 30 32 31 18 27 21 21 33 14 10 44 14 16 17 31 20 25 24 30 32 31 28 21 21 26 32 31 16 24 32 16 30 22 22 26 30 11 14 15 28 25 36 33 16 20 30 26 31 31 14 26 33 34 21 19 17 24 15 22 22 17 20 32 34 25 21 8 4 6 6 17 11 14 17 8 4 29 33 22 32 21 37 12 13 30 17 28 17 34 16 22 38 32 30 5 5 3 3 4 21 40 26 13 17 9 5 3 4 10 10 8 10 7 10 11 3 5 4 7 34 18 24 28 18 8 13 5 7 5 15 5 7 20 18 40 19 22 40 29 18 16 21 9 10 26 10 12 22 24 7 23 11 12 30 25 16 7 22 14 13 12 3 2 1 22 7 23 9 15 10 17 28 12 6 15 7 9 2 1 2 5 7 6 4 5 13 5 7 8 6 4 5 12 29 26 16 10 5 6 5 4 8 5 1 3 17 3 5 7 5 7 3 3 3 17 4 4 3 3 2 2 12 5 3 7 6 4 2 13 2 3 5 8 7 7 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_17728876_17730005
seq2: B6Ng01-329O20.g_65_1193 (reverse)

seq1  TAATCAAAGGAGAAGTTTTTCATTTTTAATC-ATTTAAAATATAAAAGGC  49
      ||||| |||||||||||||  |  |||| || ||| || |||||||| ||
seq2  TAATC-AAGGAGAAGTTTTCAA--TTTATTCAATTCAATATATAAAA-GC  46

seq1  TGTTTCACACA-CA-GTAAA-TAGAAACAATTAGCGTTTCCTTTACCTTT  96
      || |||||| | || ||||| ||||||  |||||||||||| ||||| ||
seq2  TGGTTCACAAAGCAGGTAAATTAGAAA-GATTAGCGTTTCCCTTACCCTT  95

seq1  AAAAACCCAAGTTATTGCTATTTGTTACAGGTTGGTTGTGAAATGCCACC  146
       ||||||||||||| |||||||||||||||||||| |||||||||| |||
seq2  TAAAACCCAAGTTAATGCTATTTGTTACAGGTTGG-TGTGAAATGCAACC  144

seq1  CCAAATCTCATCTGTTTTAACATTTGGCCATCAGTT-AATGATGCTCCTC  195
      |||||||||||||||||  ||||||||||||||||| |||||||||||||
seq2  CCAAATCTCATCTGTTT--ACATTTGGCCATCAGTTAAATGATGCTCCTC  192

seq1  TGGGAGGTTAGAAGAGCTTTGTCACATGGAGG-CCAGATGACAGAGAGAG  244
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGGAGGTTAGAAGAGCTTTGTCACATGGAGGCCCAGATGACAGAGAGAG  242

seq1  GCCATTAAGGGACTTGATGGCCATGCTCACTTCAGGTTCCCATTTGGCTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAAGGGACTTGATGGCCATGCTCACTTCAGGTTCCCATTTGGCTC  292

seq1  ACT-CCTTTCTAGTTGCAGCCATGTAACAAGCTACTGCTTTCTGGTCACT  343
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTTCTAGTTGCAGCCATGTAACAAGCTACTGCTTTCTGGTCACT  342

seq1  CTGCTATATAGTCCAGCTATATAGTCCAGCTGCTCTACCATACCTTCCTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATATAGTCCAGCTATATAGTCCAGCTGCTCTACCATACCTTCCTA  392

seq1  TGGACTATGATTCTCAGAAACCTGATCCAAAATAAATATGTCCTTTTTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATGATTCTCAGAAACCTGATCCAAAATAAATATGTCCTTTTTGA  442

seq1  CATTGTTTCTGACAACTTCTTTGATCCCAGTGATGAGCAAAATAAATAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTCTGACAACTTCTTTGATCCCAGTGATGAGCAAAATAAATAAT  492

seq1  ACAATATGTAAATAGATACTATAATTTATTGTGAGAATTTTTTGCATCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGTAAATAGATACTATAATTTATTGTGAGAATTTTTTGCATCAT  542

seq1  GCATTTTTCTAGATTTGACTTTCTAAAACTTGTTGGGATATAAATACGAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTCTAGATTTGACTTTCTAAAACTTGTTGGGATATAAATACGAT  592

seq1  TAATGAAATTCATTTCTAAAATTTACTGGGCTTATATATAATATACCTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAATTCATTTCTAAAATTTACTGGGCTTATATATAATATACCTAA  642

seq1  TGAAGAAATTCATTGACAGAAATTGATCCCATATTCACTGATGAAGATGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATTCATTGACAGAAATTGATCCCATATTCACTGATGAAGATGT  692

seq1  AAAGGACCAACAAGTTATATTGTTATTTTTTGCCTGTTTAGTTTGTGTGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCAACAAGTTATATTGTTATTTTTTGCCTGTTTAGTTTGTGTGT  742

seq1  ATAACATTTGTGATTGTATACACATATGTGTATATGTTTGTGTATATATC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATTTGTGATTGTATACACATATGTGTATATGTTTGTGTATATATC  792

seq1  TGTATGTGTGTATGCCTCGGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGTATGCCTCGGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTG  842

seq1  TGTGTGTGTGTGTGTGAGACTGTGTGCATGTGAAGGCTGGAGGTCAACAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGAGACTGTGTGCATGTGAAGGCTGGAGGTCAACAC  892

seq1  TGAGTGTCTTTATCACTAATCATTTTATTTTTGAGACAAAGTATCACTGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCTTTATCACTAATCATTTTATTTTTGAGACAAAGTATCACTGT  942

seq1  CCCTTGAACTCACAGATTCAACTAGAATGGCTGGCCAAACTATATCCCCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAACTCACAGATTCAACTAGAATGGCTGGCCAAACTATATCCCCA  992

seq1  TTCTATACTACTCCCATTTTAATAAAACATCAATACAAATAATAAAGGCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATACTACTCCCATTTTAATAAAACATCAATACAAATAATAAAGGCA  1042

seq1  TTGTTTGTAGTAATGTAATGAAGGCAATGTAGTCTTTGGTTTACCAGAAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTAGTAATGTAATGAAGGCAATGTAGTCTTTGGTTTACCAGAAA  1092

seq1  GTCTATTAAAAGGTCATAGCCCTCACAAAAAGAATTC  1130
      |||||||||||||||||||||||||||||||||||||
seq2  GTCTATTAAAAGGTCATAGCCCTCACAAAAAGAATTC  1129

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information