BAC Information

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BAC

Clone NameB6Ng01-330B23
Chromosome1 (Build37)
Map Location 117,265,863 - 117,266,518
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC227506
Downstream geneCntnap5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330B23.bB6Ng01-330B23.g
ACCGA116889GA116890
length1,019652
definitionB6Ng01-330B23.b B6Ng01-330B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctaagaagcacctgaaaaaatg
ctcagcattcttaatcatcatggaaatgcaaatcaaagcaaccctgagat
ttcacctcataccagtcagaatggctaagatcaaaaattcaggtaagaga
agatgctggcaaggatgtggagatagaggaacactcctccactgttggtg
ggattgcaagcctgtacaaccactctggaaagcagtctggtggttcctca
gaaaattggacatagtactactggaggatcctgtaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactgt
gttcatagcagccttatttataatagccagaagctggaaataacccagat
gtccttcaacagaggaatggatacagaaaatgtggtacatttatacaatg
gagtactactcagctattaaaacgaatgaatttttgaaattcctaggcaa
atagatggacctggagggcatcatcttgagtgagataaccctatcacaaa
agaactagcatgatatgtgctcactgataagtgtatattagcccagaaat
ttagaatacccaagatacaagatacaatttgcaaaacacatgaaactgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagagatggga
acaaaacacccatggaaggagttacagagacaaagtttggaggtgagaca
aaagtatggaccgtctagagagtaccatatccagggatccatcccataat
cagcctccaaatgctgagaccattgcatacactagcactgtgaaaatgtt
aagggatggactgaaggagctgaaagggcttgcaatctcattgataaaac
aacagtatcaactaactcagaccccttagaactcccagagactaaaccac
caaccaacaagcatacatgaggtggtctgttgtctctggtgtatatgtag
tagaaaactgcctggtctg
gaattctttctttagatctgtactccattttttaatataaccatattaaa
aattttggttttctggagtccaacttctttttttttttttttaaatttat
ttatttattatatgtaagtacactgtagctgtcctcagacactccagaag
agggagtcagacctcgttagggatggttgtgagccaccatgtggttgctg
ggatttgaactcctgacctttggaagagcagtcgggtgctcttacccact
gagccatctcaccagccctggagtccaacttcttaagatctttatatata
ttggatattagacccctatcaaatttaggattggtaaagatcttttccca
atctgttggtggcctttttgtcttattgatagtgttctttcccttacaga
agttttgcagttttatgaggtaccatttgttgattcttgatcttacatca
caagccactgcttttctgtatatgaccaaacaagagcatgtttgactcac
tgttgtttacaaaccagaactacaaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagagaaaagaaaagaaaaagaaaata
gaggagaggagaagagatgaaaggaaaggagaggaagagaggggagggga
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_117265863_117266518
seq2: B6Ng01-330B23.g_68_719

seq1  GAATTCTTTCTTTAGATCTGTACTCCATTTTTTAATATAACCATATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTAGATCTGTACTCCATTTTTTAATATAACCATATTAAA  50

seq1  AATTTTGGTTTTCTGGAGTCCAACTTCTTTTTTTTTTTTTTTAAATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGTTTTCTGGAGTCCAACTTCTTTTTTTTTTTTTTTAAATTTAT  100

seq1  TTATTTATTATATGTAAGTACACTGTAGCTGTCCTCAGACACTCCAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTATATGTAAGTACACTGTAGCTGTCCTCAGACACTCCAGAAG  150

seq1  AGGGAGTCAGACCTCGTTAGGGATGGTTGTGAGCCACCATGTGGTTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCAGACCTCGTTAGGGATGGTTGTGAGCCACCATGTGGTTGCTG  200

seq1  GGATTTGAACTCCTGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGAACTCCTGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT  250

seq1  GAGCCATCTCACCAGCCCTGGAGTCCAACTTCTTAAGATCTTTATATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCACCAGCCCTGGAGTCCAACTTCTTAAGATCTTTATATATA  300

seq1  TTGGATATTAGACCCCTATCAAATTTAGGATTGGTAAAGATCTTTTCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATTAGACCCCTATCAAATTTAGGATTGGTAAAGATCTTTTCCCA  350

seq1  ATCTGTTGGTGGCCTTTTTGTCTTATTGATAGTGTTCTTTCCCTTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGGTGGCCTTTTTGTCTTATTGATAGTGTTCTTTCCCTTACAGA  400

seq1  AGTTTTGCAGTTTTATGAGGTACCATTTGTTGATTCTTGATCTTACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCAGTTTTATGAGGTACCATTTGTTGATTCTTGATCTTACATCA  450

seq1  CAAGCCACTGCTTTTCTGTATATGACCAAACAAGAGCATGTTTGACTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACTGCTTTTCTGTATATGACCAAACAAGAGCATGTTTGACTCAC  500

seq1  TGTTGTTTACAAACCAGAACTACAAAAGAAAGAAAGAAAGAAAGAAAGAA  550
      ||||||||||||||||||||||||    ||||||||||||||||||||||
seq2  TGTTGTTTACAAACCAGAACTACA----AAAGAAAGAAAGAAAGAAAGAA  546

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAAAGAA  596

seq1  AAGAGAGGAGAGGAGAAGAGATGAAAGGAAAGGAGAGGAAGAGAGGGGAG  650
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGAGAGGAGAAGAGATGAAAGGAAAGGAGAGGAAGAGAGGGGAG  646

seq1  GGGAGA  656
      ||||||
seq2  GGGAGA  652