BAC Information

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BAC

Clone NameB6Ng01-330F21
Chromosome1 (Build37)
Map Location 70,073,409 - 70,074,550
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneErbb4, LOC667842, EG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330F21.g
ACCGA117063
length1,141
definitionB6Ng01-330F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaaaggctaattgtgacaggtcagagcctagaaaatgatatag
aaatcaaaacccatgatattattttcttcctttcatattaggaagtcagc
aatatgagaacaatactaggatgccacttgatgggtttcccaaaaaaatt
aaagaattttcatcagcgcctacagtataagtaagagacacaagtagggg
gcaagaaggcttaaaataaataagtttacattgaatcagatagtaagtgt
tttttacaaacataaactattaagtacttaaataactatttagttcattt
cataattgtatgtcttatccactttgtggaaaataagccatatcatttga
tttattattttgaataatgaaaaatctccttttaagtggcacaatttgag
tgattattaaaagaatttacaggcccttgatgctgataagtgaattatta
taattcatcacattaaatcaactttagaacagcatctgtgattaatctgg
aaaaatgtgtagattacttacattaccaaaatgattgcatccatcacagt
aaagtaacttaatgggattccattttaggaatgcataataattaattatc
taagtcattagaacaattagcatagatatgtatcttcactatcaaggata
atttcaatgttataaatcgtattttagattaagcatttaaaattgaaaag
tgaaaaattgtaataatctgcggatactgtgctatgtttctggtagcctt
taagaaacagtattatacttcctaaaactattctttcctattttttgaga
ttataatacaactacataatttccctttttgcttttttccctccaaattc
tcacgtgccaatccatggcttcctttttcattaattattgacacacaaga
attacatatatatggatacacacacacactcacacacacacacacacaca
cacacacacacacacacactcacacacacacacacacacacacacataga
tatatatatcctaaatatgtaaatataccctgttcattctatatagtgta
atatatgaacttgtaagtattgttatcatgttatcattacaacctcatgc
acctctgtactagtctaattcaatggagagaggcagttgct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70073409_70074550
seq2: B6Ng01-330F21.g_65_1205 (reverse)

seq1  AGCAACTGCCTCTCT-CACTGAATTAGACTAAGTACAGA-GTGCACTGA-  47
      ||||||||||||||| || ||||||||||| |||||||| ||||| ||| 
seq2  AGCAACTGCCTCTCTCCATTGAATTAGACT-AGTACAGAGGTGCA-TGAG  48

seq1  GTTGTAATGATAACATGGATAACAATACTTAC-AGTTCATATATTAACAC  96
      |||||||||||||||| ||||||||||||||| |||||||||||| ||||
seq2  GTTGTAATGATAACAT-GATAACAATACTTACAAGTTCATATATT-ACAC  96

seq1  TATATAGAATGAACAGGGTATATTTACATATTTAGGAATATATATATCTA  146
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATATAGAATGAACAGGGTATATTTACATATTTAGG-ATATATATATCTA  145

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTG  195

seq1  TGTGTGTGTGTGTGTGAGTGTGTGTGTGTATCCATATATATGTAATTCTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGAGTGTGTGTGTGTATCCATATATATGTAATTCTT  245

seq1  GTGTGTCAATAATTAATGAAAAAGGAAGCCATGGATTGGCACGTGAGAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCAATAATTAATGAAAAAGGAAGCCATGGATTGGCACGTGAGAAT  295

seq1  TTGGAGGGAAAAAAGCAAAAAGGGAAATTATGTAGTTGTATTATAATCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGGAAAAAAGCAAAAAGGGAAATTATGTAGTTGTATTATAATCTC  345

seq1  AAAAAATAGGAAAGAATAGTTTTAGGAAGTATAATACTGTTTCTTAAAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGGAAAGAATAGTTTTAGGAAGTATAATACTGTTTCTTAAAGG  395

seq1  CTACCAGAAACATAGCACAGTATCCGCAGATTATTACAATTTTTCACTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGAAACATAGCACAGTATCCGCAGATTATTACAATTTTTCACTTT  445

seq1  TCAATTTTAAATGCTTAATCTAAAATACGATTTATAACATTGAAATTATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTAAATGCTTAATCTAAAATACGATTTATAACATTGAAATTATC  495

seq1  CTTGATAGTGAAGATACATATCTATGCTAATTGTTCTAATGACTTAGATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGTGAAGATACATATCTATGCTAATTGTTCTAATGACTTAGATA  545

seq1  ATTAATTATTATGCATTCCTAAAATGGAATCCCATTAAGTTACTTTACTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTATTATGCATTCCTAAAATGGAATCCCATTAAGTTACTTTACTG  595

seq1  TGATGGATGCAATCATTTTGGTAATGTAAGTAATCTACACATTTTTCCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATGCAATCATTTTGGTAATGTAAGTAATCTACACATTTTTCCAG  645

seq1  ATTAATCACAGATGCTGTTCTAAAGTTGATTTAATGTGATGAATTATAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCACAGATGCTGTTCTAAAGTTGATTTAATGTGATGAATTATAAT  695

seq1  AATTCACTTATCAGCATCAAGGGCCTGTAAATTCTTTTAATAATCACTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTATCAGCATCAAGGGCCTGTAAATTCTTTTAATAATCACTCA  745

seq1  AATTGTGCCACTTAAAAGGAGATTTTTCATTATTCAAAATAATAAATCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGCCACTTAAAAGGAGATTTTTCATTATTCAAAATAATAAATCAA  795

seq1  ATGATATGGCTTATTTTCCACAAAGTGGATAAGACATACAATTATGAAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATGGCTTATTTTCCACAAAGTGGATAAGACATACAATTATGAAAT  845

seq1  GAACTAAATAGTTATTTAAGTACTTAATAGTTTATGTTTGTAAAAAACAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAATAGTTATTTAAGTACTTAATAGTTTATGTTTGTAAAAAACAC  895

seq1  TTACTATCTGATTCAATGTAAACTTATTTATTTTAAGCCTTCTTGCCCCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCTGATTCAATGTAAACTTATTTATTTTAAGCCTTCTTGCCCCC  945

seq1  TACTTGTGTCTCTTACTTATACTGTAGGCGCTGATGAAAATTCTTTAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTGTCTCTTACTTATACTGTAGGCGCTGATGAAAATTCTTTAATT  995

seq1  TTTTTGGGAAACCCATCAAGTGGCATCCTAGTATTGTTCTCATATTGCTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGAAACCCATCAAGTGGCATCCTAGTATTGTTCTCATATTGCTG  1045

seq1  ACTTCCTAATATGAAAGGAAGAAAATAATATCATGGGTTTTGATTTCTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTAATATGAAAGGAAGAAAATAATATCATGGGTTTTGATTTCTAT  1095

seq1  ATCATTTTCTAGGCTCTGACCTGTCACAATTAGCCTTTGGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCTAGGCTCTGACCTGTCACAATTAGCCTTTGGGAATTC  1141


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