BAC Information

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BAC

Clone NameB6Ng01-330M22
Chromosome1 (Build37)
Map Location 101,042,534 - 101,043,713
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream geneC230078M14Rik, LOC633295
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330M22.bB6Ng01-330M22.g
ACCGA117354GA117355
length1,172840
definitionB6Ng01-330M22.b B6Ng01-330M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatactgtctgttcatgatgaggacttaaacagcaaactggacc
ttgattttgtcgaagaatacattagctattgaaggctaccaaataagaaa
ttcgagctgttcacaggaaatatgaagaaattgatttgtacattgtctaa
gattcatatgtgaactttacagaattctttctatgtctaccttaagccac
agtgtcttttgtttccatgactgcaggccaaatttcatttctttgtttag
aagtctccttgaattcacatttatggccatattttaaaggacttcagatg
attacaagcagatgtgttttactccatgctaaactaaattataactatcg
cacaaactcccatcatgaagattatggcggtttgaacaggaatggtgatt
tttttttgttaattcttaactcaaagtgagtggaactactaggatgcgta
gccatgtttgagtaggtgtggccttgttggacaagagtggtagtgtgaag
ttggtctttgaggtcttataatctccagtctatcagtcttccttctgata
cctgaggatgtaaaactcccagttatctctccaacactgggtcagcttgc
atgcagacatgtttctcccatgatgataaacatctgaagtgtaagccatc
gccagttaaatgggattttttctatcttattttttaaaacatattttctt
tatttgcatttcaaatattatcccctttcctagtttcccctccaaaaatc
tactatcccctccccattcccactgctccctgacccacccctcccacttt
ctggccctggcattcccctacactgtagcatagaatcttcacagggccaa
agtcctctcctcccattgatgaccaactaggtcgttctctgttacatatg
ctgctagagatatgagtcccaccatgtgttttctttgattggtggtttag
tccaagggagctctggggatactggttagtcacattgtgttctctatgaa
gctgcaaatcactcagctcctttggtactttagagttgccctggcatgaa
gactctttgcagtataaaagactaaattatctccatttaaatcctttatc
tatgagattaaacctaattgtgactcagcatcatgtagttccagtggcat
tcctgacagtctttgaaaactt

gaattcaagaagttaatcaacaaaaaacccaaccaaacaaacaaaaaata
aggtgtagaactacatggagaatttacaactgaggaatctcaaattgttc
agaagtacctaaggaaatgttcaaagtccttagtgatcggagaaatgcaa
atcaaaatgaccctgagattccaccttacaccaattagaatgactaagat
caaaacctcagttgacaacatatgttgaagaggatgtggagaaagaacac
tcctctattgctggtgggattgcaaactgatacaacctctatggaaatca
atctggaggtcccagagaaaattggaaatagatctacctaaagacccaga
tataccactgttgggaatatacctaaaagacaccccacaatgccacagag
gcacctgctccactatggtcatagcagccttttttgtgatagccagaaac
tggaaaaaacctagatgtcccacaacataagaatggatacagaaaatatg
gttcatttgcacaatggaatactactccgctattaggaatgaggacatcc
tgagcttttcaggcaaatggacagaattagaaaatatcatcctgagttag
gtaactcagacccaaaaggacatgcatagtatgttttcactaataattgg
atattagccccaaaaatataataatacaaaatacccaagatatagtccgc
agaactcaaaaagctctacaagctgaagtgcccaagggaggacacctcaa
acccacatgggcgagcgaagaaagcaatcacaagtgggggagggacggag
ggactttggagagaaagtggactggggtggggagggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101042534_101043713
seq2: B6Ng01-330M22.b_47_1218

seq1  GAATTCCATACTGTCTGTTCATGATGAGGACTTAAACAGCAAACTGGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACTGTCTGTTCATGATGAGGACTTAAACAGCAAACTGGACC  50

seq1  TTGATTTTGTCGAAGAATACATTAGCTATTGAAGGCTACCAAATAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGTCGAAGAATACATTAGCTATTGAAGGCTACCAAATAAGAAA  100

seq1  TTCGAGCTGTTCACAGGAAATATGAAGAAATTGATTTGTACATTGTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGCTGTTCACAGGAAATATGAAGAAATTGATTTGTACATTGTCTAA  150

seq1  GATTCATATGTGAACTTTACAGAATTCTTTCTATGTCTACCTTAAGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATATGTGAACTTTACAGAATTCTTTCTATGTCTACCTTAAGCCAC  200

seq1  AGTGTCTTTTGTTTCCATGACTGCAGGCCAAATTTCATTTCTTTGTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTTTGTTTCCATGACTGCAGGCCAAATTTCATTTCTTTGTTTAG  250

seq1  AAGTCTCCTTGAATTCACATTTATGGCCATATTTTAAAGGACTTCAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCTTGAATTCACATTTATGGCCATATTTTAAAGGACTTCAGATG  300

seq1  ATTACAAGCAGATGTGTTTTACTCCATGCTAAACTAAATTATAACTATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAGCAGATGTGTTTTACTCCATGCTAAACTAAATTATAACTATCG  350

seq1  CACAAACTCCCATCATGAAGATTATGGCGGTTTGAACAGGAATGGTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACTCCCATCATGAAGATTATGGCGGTTTGAACAGGAATGGTGATT  400

seq1  TTTTTTTGTTAATTCTTAACTCAAAGTGAGTGGAACTACTAGGATGCGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTAATTCTTAACTCAAAGTGAGTGGAACTACTAGGATGCGTA  450

seq1  GCCATGTTTGAGTAGGTGTGGCCTTGTTGGACAAGAGTGGTAGTGTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTTGAGTAGGTGTGGCCTTGTTGGACAAGAGTGGTAGTGTGAAG  500

seq1  TTGGTCTTTGAGGTCTTATAATCTCCAGTCTATCAGTCTTCCTTCTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTTGAGGTCTTATAATCTCCAGTCTATCAGTCTTCCTTCTGATA  550

seq1  CCTGAGGATGTAAAACTCCCAGTTATCTCTCCAACACTGGGTCAGCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGATGTAAAACTCCCAGTTATCTCTCCAACACTGGGTCAGCTTGC  600

seq1  ATGCAGACATGTTTCTCCCATGATGATAAACATCTGAAGTGTAAGCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGACATGTTTCTCCCATGATGATAAACATCTGAAGTGTAAGCCATC  650

seq1  GCCAGTTAAATGGGATTTTTTCTATCTTATTTTTTAAAACATATTTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTAAATGGGATTTTTTCTATCTTATTTTTTAAAACATATTTTCTT  700

seq1  TATTTGCATTTCAAATATTATCCCCTTTCCTAGTTTCCCCTCCAAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATTTCAAATATTATCCCCTTTCCTAGTTTCCCCTCCAAAAATC  750

seq1  TACTATCCCCTCCCCATTCCCACTGCTCCCTGACCCACCCCTCCCACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCCCCTCCCCATTCCCACTGCTCCCTGACCCACCCCTCCCACTTT  800

seq1  CTGGCCCTGGCATTCCCCTACACTGTAGCATAGAATCTTCACAGGGCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTGGCATTCCCCTACACTGTAGCATAGAATCTTCACAGGGCCAA  850

seq1  AGTCCTCTCCTCCCATTGATGACCAACTAGGTCGTTCTCTGTTACATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTCCTCCCATTGATGACCAACTAGGTCGTTCTCTGTTACATATG  900

seq1  CTGCTAGAGATATGAGTCCCACCATGTGTTTTCTTTGATTGGTGGTTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGAGATATGAGTCCCACCATGTGTTTTCTTTGATTGGTGGTTTAG  950

seq1  TCCAAGGGAGCTCTGGGGATACTGGTTAGTTCACATTGTTGTTTCTCCTA  1000
      ||||||||||||||||||||||||||||| |||||||||   |||| |||
seq2  TCCAAGGGAGCTCTGGGGATACTGGTTAG-TCACATTGT--GTTCT-CTA  996

seq1  TGAAGCTGCAAATCACTTCAGCTCCTTGGGTACTTTAAGAGTTGCCCTGG  1050
      |||||||||||||||| |||||||||| |||||||| ||||||||||| |
seq2  TGAAGCTGCAAATCAC-TCAGCTCCTTTGGTACTTT-AGAGTTGCCCT-G  1043

seq1  GCATGAGGACTCTTTGCAGTAATAAAAAGAACTAATTATCTCATTTTAAA  1100
      |||||| ||||||||||||||   ||||||   |||||||||  ||||||
seq2  GCATGAAGACTCTTTGCAGTA--TAAAAGACTAAATTATCTCCATTTAAA  1091

seq1  T-CTTTATCTATG-GAGTATAAACTAATTTTGTGACTTCAGCATTCATGT  1148
      | ||||||||||| || || || ||||  ||||||| |||||| ||||||
seq2  TCCTTTATCTATGAGATTA-AACCTAA--TTGTGAC-TCAGCA-TCATGT  1136

seq1  AGTTCCAGTGGCATT-CTGACA-TCTT--AAAACTT  1180
      ||||||||||||||| |||||| ||||  |||||||
seq2  AGTTCCAGTGGCATTCCTGACAGTCTTTGAAAACTT  1172


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