BAC Information

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BAC

Clone NameB6Ng01-330P14
Chromosome1 (Build37)
Map Location 163,610,921 - 163,612,036
singlet/doubletsinglet
Overlap genenone
Upstream geneRabgap1l, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650
Downstream geneLOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc, Bat2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P14.bB6Ng01-330P14.g
ACCGA117469GA117470
length1,121204
definitionB6Ng01-330P14.b B6Ng01-330P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctcgcacctgcgtacaaggcttgtttactagttaggcacag
gaggccagcgctatcttataatggcgattgcttgcggctctccacagcta
ttgctcgctgcacggctctccacaagctaggctggtctcaaactctagac
cctccttttgtgcacccctgagtgctgggattacaggtgtgagctaccac
atctggctttagaatcaagctggctgatcatttgcaagccatgcctgtct
gaatcctgggaagtggtcttgtgtgccttctagttagacagacaggcaga
taaatggataggagagattagagaaaaatacgcagctggcaaataattaa
aaataatgttgaatcagtttaattgtacttcttaaagcacatagaaagaa
gtgggtcatggctgttattagtcatagcttgtttgagcatgccttcttca
atactgctaagaaccaggactgacatgccagaaacacagttctgagatgg
tagtcatagctgagcttattaaatcttcagggtcagtttagagtatagaa
ggtctcatgagacttctcttttttactaagcttgttttctctccccaaag
caatcatgtgcattgagtatattgctagtatgtctttaatgcactagcaa
gatgtcttccttgttttgtgctgattctgggaacatagctgccttatata
taccttttggagatgttttatatatcacaaatgtacacagaaaggatgga
aaactaccaatctaatgacactataacaatacactggtcactcctagtca
aacacatagaagtctacaaaaggcacagaaaataccttgaagtattgtcc
agtactgtccccagggccaccctacctctttcataggcatagatatacag
atattattccatggttggtcagttctactatttgtaaaatgatgctgttc
ttgctctgtttgttatgcgggtgattctaatccgttggttagcaatatag
aactgaaagttcttacattctgcatagacccagagaaatctagaataatg
caaggcacgtctgttgttctatgactttctttggctttactataggtcct
ctctctcctaagccatatgga
ttgatcttagccattctgactggtctgaggtggaatctcagggttgtttt
gatttgcatttctctgatggttaaggatgatgaacattttttcaggtgct
tctcagacattcggtattcctcaggtaagaattctttgtttagctctgag
ccccattttttaatggggttatttgattttctggactccaccttcttgag
ttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_163610921_163612036
seq2: B6Ng01-330P14.b_47_1167 (reverse)

seq1  TCCATATGGCTTAGGAGAGAGA----CTATAGTTAAAGCCAAAGAAAGTC  46
      ||||||||||||||||||||||    |||||| |||||||||||||||||
seq2  TCCATATGGCTTAGGAGAGAGAGGACCTATAG-TAAAGCCAAAGAAAGTC  49

seq1  ATAGAAC-ACAGACGTGCTTTGCATTA-TCTAGATTTCTCTGGGTCTATG  94
      ||||||| |||||||||| |||||||| ||||||||||||||||||||||
seq2  ATAGAACAACAGACGTGCCTTGCATTATTCTAGATTTCTCTGGGTCTATG  99

seq1  CAGAATGTAAGAACTTTCAGTTCTATATTGCTAACCAACGGATTAGAATC  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTAAGAACTTTCAGTTCTATATTGCTAACCAACGGATTAGAATC  149

seq1  ACCCGCATAACAAACAGAGCAAGAACAGCATCATTTTACAAATAGTAGAA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCATAACAAACAGAGCAAGAACAGCATCATTTTACAAATAGTAGAA  199

seq1  CTGACCAACCATGGAATAATATCTGTATATCTATGCCTATGAAAGAGGTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAACCATGGAATAATATCTGTATATCTATGCCTATGAAAGAGGTA  249

seq1  GGGTGGCCCTGGGGACAGTACTGGACAATACTTCAAGGTATTTTCTGTGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCCCTGGGGACAGTACTGGACAATACTTCAAGGTATTTTCTGTGC  299

seq1  CTTTTGTAGACTTCTATGTGTTTGACTAGGAGTGACCAGTGTATTGTTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAGACTTCTATGTGTTTGACTAGGAGTGACCAGTGTATTGTTAT  349

seq1  AGTGTCATTAGATTGGTAGTTTTCCATCCTTTCTGTGTACATTTGTGATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATTAGATTGGTAGTTTTCCATCCTTTCTGTGTACATTTGTGATA  399

seq1  TATAAAACATCTCCAAAAGGTATATATAAGGCAGCTATGTTCCCAGAATC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACATCTCCAAAAGGTATATATAAGGCAGCTATGTTCCCAGAATC  449

seq1  AGCACAAAACAAGGAAGACATCTTGCTAGTGCATTAAAGACATACTAGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAACAAGGAAGACATCTTGCTAGTGCATTAAAGACATACTAGCA  499

seq1  ATATACTCAATGCACATGATTGCTTTGGGGAGAGAAAACAAGCTTAGTAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTCAATGCACATGATTGCTTTGGGGAGAGAAAACAAGCTTAGTAA  549

seq1  AAAAGAGAAGTCTCATGAGACCTTCTATACTCTAAACTGACCCTGAAGAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAGTCTCATGAGACCTTCTATACTCTAAACTGACCCTGAAGAT  599

seq1  TTAATAAGCTCAGCTATGACTACCATCTCAGAACTGTGTTTCTGGCATGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGCTCAGCTATGACTACCATCTCAGAACTGTGTTTCTGGCATGT  649

seq1  CAGTCCTGGTTCTTAGCAGTATTGAAGAAGGCATGCTCAAACAAGCTATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGGTTCTTAGCAGTATTGAAGAAGGCATGCTCAAACAAGCTATG  699

seq1  ACTAATAACAGCCATGACCCACTTCTTTCTATGTGCTTTAAGAAGTACAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAACAGCCATGACCCACTTCTTTCTATGTGCTTTAAGAAGTACAA  749

seq1  TTAAACTGATTCAACATTATTTTTAATTATTTGCCAGCTGCGTATTTTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTGATTCAACATTATTTTTAATTATTTGCCAGCTGCGTATTTTTC  799

seq1  TCTAATCTCTCCTATCCATTTATCTGCCTGTCTGTCTAACTAGAAGGCAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTCTCCTATCCATTTATCTGCCTGTCTGTCTAACTAGAAGGCAC  849

seq1  ACAAGACCACTTCCCAGGATTCAGACAGGCATGGCTTGCAAATGATCAGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACCACTTCCCAGGATTCAGACAGGCATGGCTTGCAAATGATCAGC  899

seq1  CAGCTTGATTCTAAAGCCAGATGTGGTAGCTCACACCTGTAATCCCAGCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGATTCTAAAGCCAGATGTGGTAGCTCACACCTGTAATCCCAGCA  949

seq1  CTCAGGGGTGCACAAAAGGAGGGTCTAGAGTTTGAGACCAGCCTAGCTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGTGCACAAAAGGAGGGTCTAGAGTTTGAGACCAGCCTAGCTTG  999

seq1  TGGAGAGCCGTGCAGCGAGCAATAGCTGTGGAGAGCCGCAAGCAATCGCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGCCGTGCAGCGAGCAATAGCTGTGGAGAGCCGCAAGCAATCGCC  1049

seq1  ATTATAAGATAGCGCTGGCCTCCTGTGCCTAACTAGTAAACAAGCCTTGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGATAGCGCTGGCCTCCTGTGCCTAACTAGTAAACAAGCCTTGT  1099

seq1  ACGCAGGTGCGAGAGTGAATTC  1116
      ||||||||||||||||||||||
seq2  ACGCAGGTGCGAGAGTGAATTC  1121