BAC Information

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BAC

Clone NameB6Ng01-330P19
Chromosome1 (Build37)
Map Location 163,067,841 - 163,150,378
singlet/doubletdoublet
Overlap geneAnkrd45, 4930469G21Rik, EG665117, EG640200
Upstream geneTnn, Mrps14, Cacybp, Rabgap1l, Gpr52, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20
Downstream geneEG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650, LOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P19.bB6Ng01-330P19.g
ACCGA117477GA117478
length1,1691,088
definitionB6Ng01-330P19.b B6Ng01-330P19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(163,067,841 - 163,068,857)(163,149,288 - 163,150,378)
sequence
gaattccttcccatagcacagaagtaaaactaaagcaatattgcatccac
aggaggggagaaatgatagaattttgtttcacttaaagacccaatggata
cacgggtcctgtagtctcatctcatatgctgggtttactatccagacctg
acagcaggaagatggatcctggaagatgaacatgcaccgtgcaaattcat
ccatgcaggaagctcttatggcaaagtggtactctgttgtaggatattag
cacaatctcaggagcatggcatgcagctatcatcagagagctatttcttc
actggagaaagatcagaacagtttatttgaaatgggcaaacacaattctt
tacagtcttacaactcctgacacaacataatttgaatagatctgaaccag
ttagaaattccataaagtatcacactgatccattctgtcactgacatagc
actaataaggcccccaaaattaagatgtggatgatatattggtgtatgta
tgcttcagaaggtaagttaaacctgtgggtattcagaggacctccctaca
tctatataattttagggttgggctgtctggagcatgttaagtcatcccat
ttataggacagggcaacgtttgtacctcccacaatacctggtatgccttt
tcatctaggaagctgcttctattcgttggtgggtgacctaacggcttaaa
gctttgttttcgttcaacatggaacatgaagagagttttgttgaagtacc
atatgatccaagacatccttctgcattggaaatgccaggggcgagagctg
tggagatggcccatggtgtaaagtgcgtgtgcattgcaagatcctctttt
tcagatccctgctaccctcagaaaaagccagacatggtggtgtttaccta
cagtttcaacactgggagacagagagagaagaatcctgaaggcttgctag
gcagcagtctagtcaccattgatctctaggttcagtgagagatgctgtct
caagaaatatagcgaccacttacagagatgctgtcatgaagtgctgtagg
cctgctttgcttttctggagttctaccttccaaggcacagttcacccccc
cttcgtaatcctacggacactttccgtacccctctagtcttcctttaagt
ccccacgtccaccatgcaa
gaattctcataggcagacaccaacttggggctgtgtggagggaagagcta
tttgggaatctgttctgctgagagctcaaaaacaagtgcaatgatgtgag
cacgccctgtaatgagttcatgctccccaaaggccacttcttatatagct
gaagaagtaacttcccatggagaccaacagatggtgtggttgcttttttt
ccagtcacacaacagatactgtgggatgctcagtaggtcccaggcacttc
cttataaagctcaacctggcttcgagcctttctggagcatattcttagcc
atgccaacaactctgaggcaggcactgaacatttccctgggttgtcacat
accagtacctgcaagatagtcagatactgcaagccacaggacgactgaga
ggcagcaactggtctgctgtccaaagcttaagcaaaacaattttttttgg
agtttttttcttcttctttgtttgtttgggctttttaatttatatgtagt
agggccctagttttgaatatgcaaacgagatatgcatttttatgaaacag
tttaatattataattgtcattggccctttttgcattgtgctattttcatg
caaaactggatttatattcacatggagactcaggacaacagccactccct
cctgctgctagaaaggcaatgtctgttacttctctgcaggtaaacagcca
tgggccagtttccagaagcaccaggtcacttctgaagatgcccctatcta
atgcacatctcacaaagccattagtccttactgaagtcttctgtttcttg
atttttatttcctctaatgtgtaggggtgttttgtctgaatgtatgtctg
taccatatgcacacctggtacctgtggggactagatgggggagggtaccc
aatcccctgggaattggagatacagacagtttgtgagccgcacgtgggtg
ctgagactggaacctagatctctgtaagaacagccagtgcccttaccact
ggtttatctttcagctccttagaggttcctctcctttccatcccatttaa
cggccattgaaagttgttttgatactgttaccaaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_163067841_163068857
seq2: B6Ng01-330P19.b_202_1217

seq1  GCAGGAAGATGGATCCTGGAAGATGAACATGCACCGTGCAAATTCATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGATGGATCCTGGAAGATGAACATGCACCGTGCAAATTCATCCA  50

seq1  TGCAGGAAGCTCTTATGGCAAAGTGGTACTCTGTTGTAGGATATTAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAAGCTCTTATGGCAAAGTGGTACTCTGTTGTAGGATATTAGCAC  100

seq1  AATCTCAGGAGCATGGCATGCAGCTATCATCAGAGAGCTATTTCTTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGGAGCATGGCATGCAGCTATCATCAGAGAGCTATTTCTTCACT  150

seq1  GGAGAAAGATCAGAACAGTTTATTTGAAATGGGCAAACACAATTCTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGATCAGAACAGTTTATTTGAAATGGGCAAACACAATTCTTTAC  200

seq1  AGTCTTACAACTCCTGACACAACATAATTTGAATAGATCTGAACCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTACAACTCCTGACACAACATAATTTGAATAGATCTGAACCAGTTA  250

seq1  GAAATTCCATAAAGTATCACACTGATCCATTCTGTCACTGACATAGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCCATAAAGTATCACACTGATCCATTCTGTCACTGACATAGCACT  300

seq1  AATAAGGCCCCCAAAATTAAGATGTGGATGATATATTGGTGTATGTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCCCCCAAAATTAAGATGTGGATGATATATTGGTGTATGTATGC  350

seq1  TTCAGAAGGTAAGTTAAACCTGTGGGTATTCAGAGGACCTCCCTACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGGTAAGTTAAACCTGTGGGTATTCAGAGGACCTCCCTACATCT  400

seq1  ATATAATTTTAGGGTTGGGCTGTCTGGAGCATGTTAAGTCATCCCATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTTAGGGTTGGGCTGTCTGGAGCATGTTAAGTCATCCCATTTA  450

seq1  TAGGACAGGGCAACGTTTGTACCTCCCACAATACCTGGTATGCCTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGGGCAACGTTTGTACCTCCCACAATACCTGGTATGCCTTTTCA  500

seq1  TCTAGGAAGCTGCTTCTATTCGTTGGTGGGTGACCTAACGGCTTAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAGCTGCTTCTATTCGTTGGTGGGTGACCTAACGGCTTAAAGCT  550

seq1  TTGTTTTCGTTCAACATGGAACATGAAGAGAGTTTTGTTGAAGTACCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCGTTCAACATGGAACATGAAGAGAGTTTTGTTGAAGTACCATA  600

seq1  TGATCCAAGACATCCTTCTGCATTGGAAATGCCAGGGGCGAGAGCTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAGACATCCTTCTGCATTGGAAATGCCAGGGGCGAGAGCTGTGG  650

seq1  AGATGGCCCATGGTGTAAAGTGCGTGTGCATTGCAAGATCCTC-TTTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGATGGCCCATGGTGTAAAGTGCGTGTGCATTGCAAGATCCTCTTTTTCA  700

seq1  GATCCCTGCTACCCTCAGAAAAAGCCAGACATGGTGGTGTTTACCTACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGCTACCCTCAGAAAAAGCCAGACATGGTGGTGTTTACCTACAG  750

seq1  TTTCAACACTGGGAGACAGAGAGAGAAGAATCCTGAAGGCTTGCTAGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACACTGGGAGACAGAGAGAGAAGAATCCTGAAGGCTTGCTAGGCA  800

seq1  GCAGTCTAGTCACCCATTGATCTCTAGGTTCAGTGAGAGATGCTGTCTCA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTAGTCA-CCATTGATCTCTAGGTTCAGTGAGAGATGCTGTCTCA  849

seq1  AGAAATATAGCGACCACTTACAGAGATGCTGTCATGAAGTGCTGGTAGGC  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGAAATATAGCGACCACTTACAGAGATGCTGTCATGAAGTGCT-GTAGGC  898

seq1  CTGC-TTGCTTTTCT-GAGTTCTAACCTCCAAAGCACAGTTTCACCCCCC  947
      |||| |||||||||| |||||||| | ||||| |||||| ||||||||||
seq2  CTGCTTTGCTTTTCTGGAGTTCTACCTTCCAAGGCACAG-TTCACCCCCC  947

seq1  --TCTTTATTCTAACGACACTTTCCTTACCCCTCTGGGTCTTTCTTTAAG  995
        || | || |||  |||||||||| |||||||||  ||||| |||||||
seq2  CTTCGTAATCCTACGGACACTTTCCGTACCCCTCT-AGTCTTCCTTTAAG  996

seq1  CTCCCCAACTTCCACCATGCAA  1017
       ||||| || ||||||||||||
seq2  -TCCCC-ACGTCCACCATGCAA  1016

seq1: chr1_163149288_163150378
seq2: B6Ng01-330P19.g_69_1156 (reverse)

seq1  TGCCTTGGTAACAGGTACAAAACAAACCTTCAATGGGCCCTTTAAATGGG  50
      ||||||||||||||   |||||| ||| ||||||||  || |||||||||
seq2  TGCCTTGGTAACAGTATCAAAAC-AACTTTCAATGG--CCGTTAAATGGG  47

seq1  ATGGGAAGGGAGAGGA--CTCTAGGGAGCTTGAGAGATAACCCAGTGGTT  98
      || |||| ||||||||  ||||| ||||| ||| |||||| ||||||| |
seq2  AT-GGAAAGGAGAGGAACCTCTAAGGAGC-TGAAAGATAAACCAGTGG-T  94

seq1  AAGGGCACTGGCTGTTCTTACAGAGGATCTAGGTTCAGGTCTCAGCACCC  148
      |||||||||||||||||||||||| |||||||||||  ||||||||||||
seq2  AAGGGCACTGGCTGTTCTTACAGA-GATCTAGGTTCCAGTCTCAGCACCC  143

seq1  ACGTGGCGGCTCAC-AACTGTCTGTATCTCCAATT-CCAGGGGATTGGGT  196
      |||| ||||||||| |||||||||||||||||||| ||||||||||||||
seq2  ACGT-GCGGCTCACAAACTGTCTGTATCTCCAATTCCCAGGGGATTGGGT  192

seq1  ACCCT-CCCCATCTAGTCCCCACAGGTACCAGGTGTGCATATGGTACAGA  245
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCCCATCTAGTCCCCACAGGTACCAGGTGTGCATATGGTACAGA  242

seq1  CATACATTCAGACAAAACACCCCTACACATTAGAGGAAATAAAAATCAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATTCAGACAAAACACCCCTACACATTAGAGGAAATAAAAATCAAG  292

seq1  AAACAGAAGACTTCAGTAAGGACTAATGGCTTTGTGAGATGTGCATTAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAGACTTCAGTAAGGACTAATGGCTTTGTGAGATGTGCATTAGA  342

seq1  TAGGGGCATCTTCAGAAGTGACCTGGTGCTTCTGGAAACTGGCCCATGGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCATCTTCAGAAGTGACCTGGTGCTTCTGGAAACTGGCCCATGGC  392

seq1  TGTTTACCTGCAGAGAAGTAACAGACATTGCCTTTCTAGCAGCAGGAGGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTGCAGAGAAGTAACAGACATTGCCTTTCTAGCAGCAGGAGGG  442

seq1  AGTGGCTGTTGTCCTGAGTCTCCATGTGAATATAAATCCAGTTTTGCATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGTTGTCCTGAGTCTCCATGTGAATATAAATCCAGTTTTGCATG  492

seq1  AAAATAGCACAATGCAAAAAGGGCCAATGACAATTATAATATTAAACTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGCACAATGCAAAAAGGGCCAATGACAATTATAATATTAAACTGT  542

seq1  TTCATAAAAATGCATATCTCGTTTGCATATTCAAAACTAGGGCCCTACTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAAATGCATATCTCGTTTGCATATTCAAAACTAGGGCCCTACTA  592

seq1  CATATAAATTAAAAAGCCCAAACAAACAAAGAAGAAGAAAAAAACTCCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATTAAAAAGCCCAAACAAACAAAGAAGAAGAAAAAAACTCCAA  642

seq1  AAAAAATTGTTTTGCTTAAGCTTTGGACAGCAGACCAGTTGCTGCCTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGTTTTGCTTAAGCTTTGGACAGCAGACCAGTTGCTGCCTCTC  692

seq1  AGTCGTCCTGTGGCTTGCAGTATCTGACTATCTTGCAGGTACTGGTATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTCCTGTGGCTTGCAGTATCTGACTATCTTGCAGGTACTGGTATGT  742

seq1  GACAACCCAGGGAAATGTTCAGTGCCTGCCTCAGAGTTGTTGGCATGGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCCAGGGAAATGTTCAGTGCCTGCCTCAGAGTTGTTGGCATGGCT  792

seq1  AAGAATATGCTCCAGAAAGGCTCGAAGCCAGGTTGAGCTTTATAAGGAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATGCTCCAGAAAGGCTCGAAGCCAGGTTGAGCTTTATAAGGAAG  842

seq1  TGCCTGGGACCTACTGAGCATCCCACAGTATCTGTTGTGTGACTGGAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGACCTACTGAGCATCCCACAGTATCTGTTGTGTGACTGGAAAA  892

seq1  AAAGCAACCACACCATCTGTTGGTCTCCATGGGAAGTTACTTCTTCAGCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACCACACCATCTGTTGGTCTCCATGGGAAGTTACTTCTTCAGCT  942

seq1  ATATAAGAAGTGGCCTTTGGGGAGCATGAACTCATTACAGGGCGTGCTCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAAGTGGCCTTTGGGGAGCATGAACTCATTACAGGGCGTGCTCA  992

seq1  CATCATTGCACTTGTTTTTGAGCTCTCAGCAGAACAGATTCCCAAATAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGCACTTGTTTTTGAGCTCTCAGCAGAACAGATTCCCAAATAGC  1042

seq1  TCTTCCCTCCACACAGCCCCAAGTTGGTGTCTGCCTATGAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTCCACACAGCCCCAAGTTGGTGTCTGCCTATGAGAATTC  1088