BAC Information

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BAC

Clone NameB6Ng01-331F16
Chromosome1 (Build37)
Map Location 144,584,348 - 144,585,440
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331F16.bB6Ng01-331F16.g
ACCGA117742GA117743
length1,1011,175
definitionB6Ng01-331F16.b B6Ng01-331F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcctctgtcctgttttaccatatgttgtacataatcgttat
tgtatgtgtagaaatcacttatcttatgtagtgttgtgctaagtatttat
aataccttattataacaatttctacaggtaaaattgaacatgaaaataag
tggcattggggcttatgagattgctaaaagtactttctctacaaacatgg
ggacctgagtttaaattctcagcatcacataaaaagagggacctgaccac
atcactgtaatcatagggaggtggtgcaatgacagatggttccagagagc
ttgctatatacctgttctagagaaagggtaggtttccagctcaatgagtt
cccgagagattccataaagcaataaggcctattcataaaacatacacaca
taccttaattcttgtgcatttaccatgcactgaaacacataaattttctc
tctcttgtctctctctctctctgtatccctctctgtctctgtctgtctgt
ctgtctgtctgcctgtctctctctctctctctctctctctctctctctgt
gtgtctgtctgtctctctctctccccccctggtgccccacacaaacacta
agctacattaaagtatagtcatcaatattaaaaattagaaaaagatgatg
ttgttaaagagaatgttcttgaattgcgcaggacctgactcatgctggga
aaacaaaaccaccataatatgggttataaacttcatgacctaaatggaaa
tttaattgattcaagttatttagaatgccagaaggaagaaatctgaagta
tacataaagaggagaatttttattctactaatttagttaattagtttgtt
ttggaaagagacataaaaaaataaatgcaggaaagggattagtgagccag
aggtgtactagagatggccacattgcttaatgatggatttctagtgttgc
aaagatacagagttaaagttgggtgaggaaaaaaaaaagttaaattcaaa
agaagttctgtttccattcaattctagtgcatcaatagtagcagaatctt
taaggtgtttcttatgttttctgatgacttcacatgaaattgaaactgaa
t

gaattctcacctgaggaataccgaatgacagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacatcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggctggaacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactcctggaggatccagcaatacctgtcctgagc
atatatccagaagatgtcccaaccggttagaaggacatgctccactatgt
tcatagcagccttatttataatagcccgaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaat
ggatgaacctggagggtatcatcctgagtgaggtaacacattcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccaaaacgta
gaatacccaagatataagatacaatttgctaaacacatgaaactcaagaa
gaatgaagactgaagtgtggacactatgcccctccttagaattgggaaca
aaacacccatggaaggagttacagagacaatttttggagctgagacgaaa
ggatggaccatctagagactgccatatccagggatccaccccacaatcag
ctttcaaacgctgacaccattgcatacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgccggggccctagcaaaca
cagaagtggatgctcacagtcagctattggatgggatcacagggctccca
atggaggagctagagaaagtaccaaagagcttaagggatctgcaacctat
aagtgaacaacctatgaaactaaccagtaccccgagctcttgacctctag
ctgcatattgtatcaaagatgctagtcgccattccactgaaagagaggct
atttgaaccacgcactgtattgacctagttacatggcattgtctatgtcc
taatataggcagagtgatgaggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144584348_144585440
seq2: B6Ng01-331F16.b_50_1150 (reverse)

seq1  ATTCAGTTTTAATTTCATGTGAATGTCATCAG-AAACAT---AGACACCT  46
      ||||||||| ||||||||||||| |||||||| ||||||   | ||||||
seq2  ATTCAGTTTCAATTTCATGTGAA-GTCATCAGAAAACATAAGAAACACCT  49

seq1  TAAAGA-TCTGCTACTA-TGATGCACTAGAATGGAATGGAAACAGAACTT  94
      |||||| |||||||||| |||||||||||||| |||||||||||||||||
seq2  TAAAGATTCTGCTACTATTGATGCACTAGAATTGAATGGAAACAGAACTT  99

seq1  CTTT--GATTTAAC-TTTTTTTTTCCTCACCCAACTTTAACTCTGTATCT  141
      ||||   ||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTTTGAATTTAACTTTTTTTTTTCCTCACCCAACTTTAACTCTGTATCT  149

seq1  TTGCAACACTAGAAATCCATCATTAAGCAATGTGGCCATCTCTAGTACAC  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACACTAGAAATCCATCATTAAGCAATGTGGCCATCTCTAGTACAC  199

seq1  CTCTGGCTCACTAATCCCTTTCCTGCATTTATTTTTTTATGTCTCTTTCC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTCACTAATCCCTTTCCTGCATTTATTTTTTTATGTCTCTTTCC  249

seq1  AAAACAAACTAATTAACTAAATTAGTAGAATAAAAATTCTCCTCTTTATG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACTAATTAACTAAATTAGTAGAATAAAAATTCTCCTCTTTATG  299

seq1  TATACTTCAGATTTCTTCCTTCTGGCATTCTAAATAACTTGAATCAATTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCAGATTTCTTCCTTCTGGCATTCTAAATAACTTGAATCAATTA  349

seq1  AATTTCCATTTAGGTCATGAAGTTTATAACCCATATTATGGTGGTTTTGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCATTTAGGTCATGAAGTTTATAACCCATATTATGGTGGTTTTGT  399

seq1  TTTCCCAGCATGAGTCAGGTCCTGCGCAATTCAAGAACATTCTCTTTAAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGCATGAGTCAGGTCCTGCGCAATTCAAGAACATTCTCTTTAAC  449

seq1  AACATCATCTTTTTCTAATTTTTAATATTGATGACTATACTTTAATGTAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATCTTTTTCTAATTTTTAATATTGATGACTATACTTTAATGTAG  499

seq1  CTTAGTGTTTGTGTGGGGCACCAGGGGGGGAGAGAGAGAGACAGACAGAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGTTTGTGTGGGGCACCAGGGGGGGAGAGAGAGAGACAGACAGAC  549

seq1  ACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGCAGACAGAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGCAGACAGAC  599

seq1  AGACAGACAGACAGAGACAGAGAGGGATACAGAGAGAGAGAGAGACAAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACAGACAGAGACAGAGAGGGATACAGAGAGAGAGAGAGACAAGA  649

seq1  GAGAGAAAATTTATGTGTTTCAGTGCATGGTAAATGCACAAGAATTAAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAATTTATGTGTTTCAGTGCATGGTAAATGCACAAGAATTAAGG  699

seq1  TATGTGTGTATGTTTTATGAATAGGCCTTATTGCTTTATGGAATCTCTCG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTATGTTTTATGAATAGGCCTTATTGCTTTATGGAATCTCTCG  749

seq1  GGAACTCATTGAGCTGGAAACCTACCCTTTCTCTAGAACAGGTATATAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCATTGAGCTGGAAACCTACCCTTTCTCTAGAACAGGTATATAGC  799

seq1  AAGCTCTCTGGAACCATCTGTCATTGCACCACCTCCCTATGATTACAGTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCTGGAACCATCTGTCATTGCACCACCTCCCTATGATTACAGTG  849

seq1  ATGTGGTCAGGTCCCTCTTTTTATGTGATGCTGAGAATTTAAACTCAGGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCAGGTCCCTCTTTTTATGTGATGCTGAGAATTTAAACTCAGGT  899

seq1  CCCCATGTTTGTAGAGAAAGTACTTTTAGCAATCTCATAAGCCCCAATGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGTTTGTAGAGAAAGTACTTTTAGCAATCTCATAAGCCCCAATGC  949

seq1  CACTTATTTTCATGTTCAATTTTACCTGTAGAAATTGTTATAATAAGGTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTTTCATGTTCAATTTTACCTGTAGAAATTGTTATAATAAGGTA  999

seq1  TTATAAATACTTAGCACAACACTACATAAGATAAGTGATTTCTACACATA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATACTTAGCACAACACTACATAAGATAAGTGATTTCTACACATA  1049

seq1  CAATAACGATTATGTACAACATATGGTAAAACAGGACAGAGGCAAAGAAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACGATTATGTACAACATATGGTAAAACAGGACAGAGGCAAAGAAT  1099

seq1  TC  1093
      ||
seq2  TC  1101


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