BAC Information

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BAC

Clone NameB6Ng01-332J19
Chromosome1 (Build37)
Map Location 19,433,527 - 19,434,411
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Downstream genePkhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332J19.bB6Ng01-332J19.g
ACCGA118663GA118664
length9101,188
definitionB6Ng01-332J19.b B6Ng01-332J19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgattacatacactaacagacacttataccattgtagcta
ggtatgtgctagacttaaatggtttgccatttttttatttattaggtagc
tctaattttgaacaaactgtggtccactgactacattttagtaaataatt
ttatagaaaaacacagtggcactcatcatttaagtttctttgctttttat
ccctccccatactactcatgcatttataacctcagatctccatggctgac
acattgacctgacatgctcttgaagctgaagatatggtctatttggccta
ccacaacacacacacacacacacacactacacatggcacagtctactttg
attagctaaatgtttgttcttttttttttttcttttttttttctttccat
tttttattaggtatttagctcatttacatttccaatgctataccaaaagt
cccccatacccacccacccccactcccctacccgcccactcccccttttt
ggccctggcgttcccctattctggggcataggaagtttgtgtgtccaatg
ggcctctctttccagtgatggccgactaggccatcttttgatacatatgc
agctagagtaaagagctccggggtactggttagttcataatgttgatcca
actatagggttgaagatccctttagctccttgggtactttctctagctcc
tccattgggagccctgtgatccatccattagctgactgtggggcattcac
ttctgtgtttgctaggccccggcatagtctcacaagagacagctacatct
gggtcctttcaataaatcttgctagtgtatgaaatggtgtcagcgtttgg
atgctgattatggggtggatccctggatatggcagacacaacatggtcca
ttcgtttcat

gaattctttggtttctccatctatggtaattgagaattttgctggcattt
gtgttctcttagggtctgtataacatctgtacaggatcttctgtctttca
tagtctctggtgagaactctggtgtaattctaataggtctgcctttatgt
tacttgacctttttcccttactgcttttaatattatatctttatttagta
catttgttgttctgattattatgtgtcaggaggaatttcttttctggttt
aatctatttggagttctgtaggcttcttgtacgttcatgggcaattcttt
ctctaggtatgtgaagttttcttctataattttgtcgaagatatttactg
gccttttaagttgaatatcttcattctcatctatacctattatctgtagg
tttggtcttctcattgtgtcctgaatttcctggatgttttgagttaggat
ctttttgctttttgcattttctttgattgttgtgtccatgttttctatgg
aatcttctgtacctgagtttctctcttccatctcttgtattttgttgctg
atgctcacatcttggttcctgatttcttttctatggtttctatctccaga
gttgtctatctttgtgttttcttaattgtttctccttccattttttgatc
ttggaaggttttgttcaattccatcatctatttggttgtgttttcctgta
attccttaagggattttttttttttttggtgtgtatgtgtttctctcatt
aatgtcttctacctgtttaacagtgttttcttgtaattccttgagggatt
tttgtacttcctctttaatggtttctacctgtttagcagtgttctactgt
atttctttaagtgtgttattaatgcccttcttaaaatcttctaccaccat
cataagatatgattttagatatgcatcttgcttttcaggtgtgttggggt
atctagaacttgctgtggtggggagtactgggtctgatgatgctgaatgg
tcttggtttctgctagtcaagattcttatggtttgccctttcacaatggg
taattcttggggtagatgttctagctgttctcggctggaaccttgttctc
ctgtgaatctgggtatgctatctgtcaacttcaattgattccaaaccctc
ctctgagtccaatggtccaggtcacctctatgagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19433527_19434411
seq2: B6Ng01-332J19.b_44_928

seq1  GAATTCTCTCTGATTACATACACTAACAGACACTTATACCATTGTAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGATTACATACACTAACAGACACTTATACCATTGTAGCTA  50

seq1  GGTATGTGCTAGACTTAAATGGTTTGCCATTTTTTTATTTATTAGGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTGCTAGACTTAAATGGTTTGCCATTTTTTTATTTATTAGGTAGC  100

seq1  TCTAATTTTGAACAAACTGTGGTCCACTGACTACATTTTAGTAAATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTGAACAAACTGTGGTCCACTGACTACATTTTAGTAAATAATT  150

seq1  TTATAGAAAAACACAGTGGCACTCATCATTTAAGTTTCTTTGCTTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAAAAACACAGTGGCACTCATCATTTAAGTTTCTTTGCTTTTTAT  200

seq1  CCCTCCCCATACTACTCATGCATTTATAACCTCAGATCTCCATGGCTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCATACTACTCATGCATTTATAACCTCAGATCTCCATGGCTGAC  250

seq1  ACATTGACCTGACATGCTCTTGAAGCTGAAGATATGGTCTATTTGGCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACCTGACATGCTCTTGAAGCTGAAGATATGGTCTATTTGGCCTA  300

seq1  CCACAACACACACACACACACACACACTACACATGGCACAGTCTACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACACACACACACACACACACACTACACATGGCACAGTCTACTTTG  350

seq1  ATTAGCTAAATGTTTGTTCTTTTTTTTTTTTCTTTTTTTTTTCTTTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTAAATGTTTGTTCTTTTTTTTTTTTCTTTTTTTTTTCTTTCCAT  400

seq1  TTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGT  450

seq1  CCCCCATACCCACCCACCCCCACTCCCCTACCCGCCCACTCCCCCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATACCCACCCACCCCCACTCCCCTACCCGCCCACTCCCCCTTTTT  500

seq1  GGCCCTGGCGTTCCCCTATTCTGGGGCATAGGAAGTTTGTGTGTCCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGCGTTCCCCTATTCTGGGGCATAGGAAGTTTGTGTGTCCAATG  550

seq1  GGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGC  600

seq1  AGCTAGAGTAAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGTAAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCA  650

seq1  ACTATAGGGTTGAAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGGGTTGAAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCC  700

seq1  TCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGT-GGGCATTCAC  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGGGGCATTCAC  750

seq1  TTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCT  800

seq1  GGGTCCTTTCGATAAAATCTTGCTAGTGTATGAAATGGTGTCAGCGTTTG  849
      |||||||||| || ||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTTTCAAT-AAATCTTGCTAGTGTATGAAATGGTGTCAGCGTTTG  849

seq1  GATGCTGATTATGGGGTGGATCCCTGGATATGGCAG  885
      ||||||||||||||||||||||||||||||||||||
seq2  GATGCTGATTATGGGGTGGATCCCTGGATATGGCAG  885


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