BAC Information

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BAC

Clone NameB6Ng01-332K14
Chromosome1 (Build37)
Map Location 177,409,124 - 177,556,684
singlet/doubletdoublet
Overlap geneRgs7, Fh1
Upstream geneFmn2, Grem2
Downstream geneKmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332K14.bB6Ng01-332K14.g
ACCGA118701GA118702
length3331,116
definitionB6Ng01-332K14.b B6Ng01-332K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(177,409,124 - 177,409,456)(177,555,565 - 177,556,684)
sequence
ctttctctctgggtttaactgaaactacaaataattcatttttcctttat
tacacattatgtaattttctcctaattcaagggagtgattttacctagaa
ccaggcctttggatgtgagatttcataaataattatatgtgtgaaaatac
ttttaaaattaaaaacacatttcgtcatatgtttgcacaacctgaaatgt
tccatgtgatagctaaattaagttttatatgcagggtttgggtttggttt
ttgttttgccttgtctttggatttagttttgattttttggtttatttttg
ttttttggtttgttgtttgtttgtttggatttt

gaattcaactcctccctaccgtggcatctagagtgctgaggctataaatt
gaagcctctcatttcctgaagaacttcctctttaactgtcttctgattct
gcattagaaaattaaaagaagagacacaattttttttatcagttactctt
tttccattggcatcatttaagcaatgttttccctagcctgtaaccacaaa
gaaaatcagagatgaaaaatcccaaggaatgtggacacattataaatgtt
atcagaggacatgttaaaagacagaggaaaaggctggagagatgacccag
tggtaaagagcagtgactgctctcccaggtgtcctgagttcaattctcag
caaccacagggtggctcacaaccatcacaataagagggatctgatgccct
cttctggtgagtctgaagtctgctacaatgtactcatagacataaaataa
atcttttaaaaaaatgacaggaaaattgactccaaaatgacaactaggag
cattgtgggataattgattactacttccttgtttaaaatttgaggcactt
tctaggaagataagtatttgagacacggattcatacagctgcacgtcatg
ggtggttgcaggataaatattaacttgataacatgttctttctaggctgt
ctcacggacctagtactacaggcatcttcagccagtttcctgcctcctag
cagccacatttgaagtattgtcggaagatctgacctcccgcctcttgtct
tttcccatgattccttccgcactagtttcccgtgaacccgaggacttcaa
acagccatactacaggcccagggaaggcaacccgccccattagttattat
tggccagtcatgggttagtcccgtcctacatgctcaggaagaggcgtttg
attggttacgagcgttgcccggaatctgacgtattagggggcgtggctca
gctcagcttttccacccccgtacagcagcacatgttaccgcgcactccgt
ctcctcgcgcgctcgcgtcgctctgcgggttcgtcggcgtgctgcagtgt
ctggggagcgaccaccccttccgcggtgttgcttcgaccgtccgcgatgg
gtgagcggcatctcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_177409124_177409456
seq2: B6Ng01-332K14.b_49_381

seq1  CTTTCTCTCTGGGTTTAACTGAAACTACAAATAATTCATTTTTCCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTGGGTTTAACTGAAACTACAAATAATTCATTTTTCCTTTAT  50

seq1  TACACATTATGTAATTTTCTCCTAATTCAAGGGAGTGATTTTACCTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTATGTAATTTTCTCCTAATTCAAGGGAGTGATTTTACCTAGAA  100

seq1  CCAGGCCTTTGGATGTGAGATTTCATAAATAATTATATGTGTGAAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTTTGGATGTGAGATTTCATAAATAATTATATGTGTGAAAATAC  150

seq1  TTTTAAAATTAAAAACACATTTCGTCATATGTTTGCACAACCTGAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTAAAAACACATTTCGTCATATGTTTGCACAACCTGAAATGT  200

seq1  TCCATGTGATAGCTAAATTAAGTTTTATATGCAGGGTTTGGGTTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGATAGCTAAATTAAGTTTTATATGCAGGGTTTGGGTTTGGTTT  250

seq1  TTGTTTTGCCTTGTCTTTGGATTTAGTTTTGATTTTTTGGTTTATTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGCCTTGTCTTTGGATTTAGTTTTGATTTTTTGGTTTATTTTTG  300

seq1  TTTTTTGGTTTGTTGTTTGTTTGTTTGGATTTT  333
      |||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTTTGTTGTTTGTTTGTTTGGATTTT  333


seq1: chr1_177555565_177556684
seq2: B6Ng01-332K14.g_70_1185 (reverse)

seq1  CCGAGATGCCCGCTCACCATTCGCGCGACGTTCGGAGC-ACACCGCGGGA  49
      |||||||| |||||||||  ||||| |||| ||| ||| ||||||||| |
seq2  CCGAGATG-CCGCTCACCCATCGCG-GACGGTCGAAGCAACACCGCGGAA  48

seq1  -GGGTGGTCGCTTCCCCAGACACTGCAGCACCGGCGGACGGAACCCGCAG  98
       |||||||||| |||||||||||||||||||  || ||| ||||||||||
seq2  GGGGTGGTCGC-TCCCCAGACACTGCAGCAC--GCCGAC-GAACCCGCAG  94

seq1  GAGGCGACGCGAGCGCGCGAGGAGACGGAGTGCGCGGT-ACATGGTGCTG  147
         ||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  --AGCGACGCGAGCGCGCGAGGAGACGGAGTGCGCGGTAACAT-GTGCTG  141

seq1  CTGTACGGGGGTGG-AAAGCTGAGCCTGAGCCACGCCCCCTAATACGTCA  196
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  CTGTACGGGGGTGGAAAAGCTGAG-CTGAGCCACGCCCCCTAATACGTCA  190

seq1  GATTCC-GGCCACGCTCGTAACCAATCAAACGCCTCTTCCTGAGCATGTA  245
      |||||| ||| |||||||||||||||||||||||||||||||||||||||
seq2  GATTCCGGGCAACGCTCGTAACCAATCAAACGCCTCTTCCTGAGCATGTA  240

seq1  GGACGGGACTAA-CCATGACTGGCCAATAATAACTAATGGGGCGGGTTGC  294
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGACGGGACTAACCCATGACTGGCCAATAATAACTAATGGGGCGGGTTGC  290

seq1  CTTCCCTGGGCCTGTAGTATGGCTGTTTGAAGTCCTCGGGTTCACGGGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGGGCCTGTAGTATGGCTGTTTGAAGTCCTCGGGTTCACGGGAA  340

seq1  ACTAGTGCGGAAGGAATCATGGGAAAAGACAAGAGGCGGGAGGTCAGATC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGCGGAAGGAATCATGGGAAAAGACAAGAGGCGGGAGGTCAGATC  390

seq1  TTCCGACAATACTTCAAATGTGGCTGCTAGGAGGCAGGAAACTGGCTGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGACAATACTTCAAATGTGGCTGCTAGGAGGCAGGAAACTGGCTGAA  440

seq1  GATGCCTGTAGTACTAGGTCCGTGAGACAGCCTAGAAAGAACATGTTATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGTAGTACTAGGTCCGTGAGACAGCCTAGAAAGAACATGTTATC  490

seq1  AAGTTAATATTTATCCTGCAACCACCCATGACGTGCAGCTGTATGAATCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATATTTATCCTGCAACCACCCATGACGTGCAGCTGTATGAATCC  540

seq1  GTGTCTCAAATACTTATCTTCCTAGAAAGTGCCTCAAATTTTAAACAAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCAAATACTTATCTTCCTAGAAAGTGCCTCAAATTTTAAACAAGG  590

seq1  AAGTAGTAATCAATTATCCCACAATGCTCCTAGTTGTCATTTTGGAGTCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTAATCAATTATCCCACAATGCTCCTAGTTGTCATTTTGGAGTCA  640

seq1  ATTTTCCTGTCATTTTTTTAAAAGATTTATTTTATGTCTATGAGTACATT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGTCATTTTTTTAAAAGATTTATTTTATGTCTATGAGTACATT  690

seq1  GTAGCAGACTTCAGACTCACCAGAAGAGGGCATCAGATCCCTCTTATTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGACTTCAGACTCACCAGAAGAGGGCATCAGATCCCTCTTATTGT  740

seq1  GATGGTTGTGAGCCACCCTGTGGTTGCTGAGAATTGAACTCAGGACACCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTGAGCCACCCTGTGGTTGCTGAGAATTGAACTCAGGACACCT  790

seq1  GGGAGAGCAGTCACTGCTCTTTACCACTGGGTCATCTCTCCAGCCTTTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCAGTCACTGCTCTTTACCACTGGGTCATCTCTCCAGCCTTTTC  840

seq1  CTCTGTCTTTTAACATGTCCTCTGATAACATTTATAATGTGTCCACATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTTTAACATGTCCTCTGATAACATTTATAATGTGTCCACATTC  890

seq1  CTTGGGATTTTTCATCTCTGATTTTCTTTGTGGTTACAGGCTAGGGAAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGATTTTTCATCTCTGATTTTCTTTGTGGTTACAGGCTAGGGAAAA  940

seq1  CATTGCTTAAATGATGCCAATGGAAAAAGAGTAACTGATAAAAAAAATTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTAAATGATGCCAATGGAAAAAGAGTAACTGATAAAAAAAATTG  990

seq1  TGTCTCTTCTTTTAATTTTCTAATGCAGAATCAGAAGACAGTTAAAGAGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCTTTTAATTTTCTAATGCAGAATCAGAAGACAGTTAAAGAGG  1040

seq1  AAGTTCTTCAGGAAATGAGAGGCTTCAATTTATAGCCTCAGCACTCTAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTCAGGAAATGAGAGGCTTCAATTTATAGCCTCAGCACTCTAGA  1090

seq1  TGCCACGGTAGGGAGGAGTTGAATTC  1120
      ||||||||||||||||||||||||||
seq2  TGCCACGGTAGGGAGGAGTTGAATTC  1116


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