BAC Information

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BAC

Clone NameB6Ng01-334D17
Chromosome1 (Build37)
Map Location 47,458,559 - 47,459,520
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666855, Slc39a10, EG227061
Downstream geneLOC666869, LOC546734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334D17.bB6Ng01-334D17.g
ACCGA119788GA119789
length564958
definitionB6Ng01-334D17.b B6Ng01-334D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttctttctgagccccattttttactggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcgattctcgatcttacagcaccaccccttgctgttc
tgttcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagattcagtgtctctggttttatgagaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccgctggatggttttagctcccttgtcgaagatcaagtg
accatacgtgtgtggattcatttctggatcttcaattctattccattggt
ctacttgtctgtct

gaattctttgaaaggattagaacatgtagacttgtttgagtagatgtagc
cttgttgaagcaggtatgtactggagggtgaaccttgatgtttcagaaga
tcaaggtagaccctctctttgcctgctgcctgcagatccagatgtaaaac
tctctggattcttctccatcaccatctcttcctgtgtgcaaccatactta
cctaccatgacaatagtaaacctctgaactgtaacccggaaaatgcaatg
cttcccttcgtaagagttgttgtggtcatggtgtctcttcacagaaataa
aacccaaactaaggcaaatataatatgaaaactatgcatcttattttaag
gtttcctgaactccacatttattttaaaatctaactactcagtaacatga
caatttttagtaaattttgggaccttcattatactgataacttgactttt
tactacatatgtatgtttgtattggagtacatataggaaagagatatctt
attaatgtgttgtccacatttgttcttgtacatgaaattctccatatatt
cttatcccaaggcaaaaaaaaaaaaaaaatcaactcagtgtgtaaagaga
acttgcactaaattcatttcatccagcctattttgagtctacatattctc
tcttatagtctttggtccattacttttatgtttgttacctaatttttcca
cacatttgtgtgacccagtgaatgcgtatggctatcatcttttctttaaa
gactattggagagaagtaatattatatcgcgaactcagaaatattgaaag
aatgcttcattaccttactgtctttggaatatgcattgtttctttactgt
ttcaacacctgcctcccatctaccctagaatctaacttccacacgaatat
acacagcacttttgtgaaggacactactgactttatcctccctgcagcac
acctgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47458559_47459520
seq2: B6Ng01-334D17.g_69_1026 (reverse)

seq1  TATCAGGTCTGCTCTCGAGAGGATATAAGTCAGTAGTGTTACTATCACAA  50
      |||||||| ||||   | ||||||| |||||||||||||  |  ||||||
seq2  TATCAGGTGTGCTGCAGGGAGGATA-AAGTCAGTAGTGT--CCTTCACAA  47

seq1  AAAGGCTGTTGAATATTTGGGTGGAAGTTAGATTCTTGGGTAGATGGCTG  100
      ||  |||| || ||||| | |||||||||||||||| ||||||||||  |
seq2  AAGTGCTG-TGTATATTCGTGTGGAAGTTAGATTCTAGGGTAGATGGGAG  96

seq1  GCAGGTGCTGAAACAGTAAAGAAACAAAGCATTCTCCAAAGACAGTTATG  150
      ||||||| ||||||||||||||||||| ||||  |||||||||||| | |
seq2  GCAGGTGTTGAAACAGTAAAGAAACAATGCATATTCCAAAGACAGTAAGG  146

seq1  TTATAGAAGCCTTCCTTCCTTCCTTCTGAACTC-CGATCTCCTATTACTT  199
      | || ||||| ||| |||  |  ||||||  || |||| |  ||||||||
seq2  TAAT-GAAGCATTCTTTCAATATTTCTGAGTTCGCGATATAATATTACTT  195

seq1  CTCTCCAAGGGTCTTTAAAG-AAAGATTATAGCCATATGCCTTCACTGGG  248
      ||||||||  |||||||||| |||||| ||||||||| || |||||||||
seq2  CTCTCCAATAGTCTTTAAAGAAAAGATGATAGCCATACGCATTCACTGGG  245

seq1  ACACTAAAATGTAGGGAAAAATTAGGTAACAAACATAAAAGTAATGGACC  298
       |||  ||||||  ||||||||||||||||||||||||||||||||||||
seq2  TCACACAAATGTGTGGAAAAATTAGGTAACAAACATAAAAGTAATGGACC  295

seq1  AAAGACCTTTAGAGAGAATATTAAAACTCAAAATAGGCTGGATGAAATGA  348
      ||||||  | |||||||||||  | |||||||||||||||||||||||||
seq2  AAAGACTATAAGAGAGAATATGTAGACTCAAAATAGGCTGGATGAAATGA  345

seq1  ATTTACTGCAAGTTCTCTTTACACACTGAGTTGATTTTTTTTTTTTTTTT  398
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTGCAAGTTCTCTTTACACACTGAGTTGATTTTTTTTTTTTTTTT  395

seq1  GCCTTTGGATACGAATATATGGAGAATTACATGTACAAGAACAAATGTGG  448
      ||||| ||||| |||||||||||||||| |||||||||||||||||||||
seq2  GCCTTGGGATAAGAATATATGGAGAATTTCATGTACAAGAACAAATGTGG  445

seq1  ACAACACATTAATAAGATATCACTTTCCTATATGTACTCAAATACAAACA  498
      ||||||||||||||||||||| ||||||||||||||||| ||||||||||
seq2  ACAACACATTAATAAGATATCTCTTTCCTATATGTACTCCAATACAAACA  495

seq1  CACATATGTAGTAAAAAGTCAACTTATCAGTATAATGAAGGTCCCAAAAT  548
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TACATATGTAGTAAAAAGTCAAGTTATCAGTATAATGAAGGTCCCAAAAT  545

seq1  TTACTAAAAATTGTCATGTTATTGAGTAGTTAGATTTTAAAATAAATCTG  598
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TTACTAAAAATTGTCATGTTACTGAGTAGTTAGATTTTAAAATAAATGTG  595

seq1  GAGTTCAGGAAACCTTAAAATAAGCTGCATAGTTTTCATATTATATTTGC  648
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGTTCAGGAAACCTTAAAATAAGATGCATAGTTTTCATATTATATTTGC  645

seq1  CTTAGTTTGGGTTTTATTTCTGTGAAGAGACACCATGACCACAACAACTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTGGGTTTTATTTCTGTGAAGAGACACCATGACCACAACAACTC  695

seq1  TTATGAAGGGAAGCATTGAATTTTCCGGCTTACAGTTCAGAGGTTTACTA  748
      ||| |||||||||||||| ||||||||| |||||||||||||||||||||
seq2  TTACGAAGGGAAGCATTGCATTTTCCGGGTTACAGTTCAGAGGTTTACTA  745

seq1  TTGTCATGGTAGGTAAGTATGGTTGCACACAGGAAGAGATGGTGATGGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATGGTAGGTAAGTATGGTTGCACACAGGAAGAGATGGTGATGGAG  795

seq1  AAGAATCCAGAGAGTTTTACATCTGGATCTGCAGGCAGCAGGCAAAGAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCAGAGAGTTTTACATCTGGATCTGCAGGCAGCAGGCAAAGAGA  845

seq1  GGGTCTACCTTGATCTTCTGAAACATCAAGGTTCACCCTCCAGTGACATA  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGTCTACCTTGATCTTCTGAAACATCAAGGTTCACCCTCCAGT-ACATA  894

seq1  CCTGCTTCAACAAGGCTACATCTACTCTAACAAGTCTACATGTTCTAATC  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTGCTTCAACAAGGCTACATCTACTCAAACAAGTCTACATGTTCTAATC  944

seq1  CTTTCAAAGAATTC  962
      ||||||||||||||
seq2  CTTTCAAAGAATTC  958


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