BAC Information

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BAC

Clone NameB6Ng01-334F04
Chromosome1 (Build37)
Map Location 30,972,377 - 30,973,379
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665944, EG624138, LOC100040699, Phf3, EG638995
Downstream genePtp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334F04.bB6Ng01-334F04.g
ACCGA119853GA119854
length1,0031,160
definitionB6Ng01-334F04.b B6Ng01-334F04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttactattgtgtagtgaaaagttgcttaattgtgatcagtgt
ttatatagacgtacaaaaacattttctattaacactcttgatattgacaa
attgatactgctcttatttctctggatattattttatttttttaaaagat
ttatttatttattatatgtaagtacactgtagctgtcttcagacattcca
ggagagggtgtcagatcttgttacagatggttgtgagccaccatgtggtt
gctggggtttgaattcaggacctttggaagagcaggcagtgcttttaact
gctgagccacctctccagccctcttgctgtatttaaatggcaacaattta
tagttaattcatatatcaatgtgtgtacatcttgccattttgtgatctta
gtaactgttttgatcatattgctcttattatctgaatgcagatattgaag
cattccttttgtaaaattcaaaatgttgtcttcaaatctgattattttaa
actaataaattttactaaatgctctctgcgggtctagaaaataatcagat
gttttcttccaaatgctttgctcacatgatgaatgacatagaattctttt
attacaggaaaacagcttttactatttaaataaatttttactgctcatgc
ctactagtcccagacccaggactttgagttagcccaccccaacatcaacc
ccatttattatcttctgaagcatgtaaaagggccacaggtccaaagctgc
aggatttccacaacacaggtcagtaacaggatatacagaaaagtcccagt
gaagatccagtatagatagtgtcctggaagctaaagaccttgaaacagac
caattaactcattgcaatgagcatcggcaggtaaagaaatgtggacaaag
ggtgtactgggtgacatactgtgacacactacagcttccacaacaagatt
ttctttctatcttattttatttggggaagaggttgcaagggtggagggtg
gat
gaattctcacctgaggaataccgaatggcagagaagcatatgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaacacaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aacgatggaccatttagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagttgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaccctat
aggcggaacacatatgactacagtacccggagcttctgactctagctgca
tttgtatccaagatgctagtcgcaatcactggaaagaagccatgaccgcg
acttatatgccagtacaggacgccaggtcaaaaggggcagtggtggtggg
ataggcgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30972377_30973379
seq2: B6Ng01-334F04.b_48_1050 (reverse)

seq1  ATCCACCCTCCACCCTTGCAACCTCTTCCCCAAATAAAATAAGATAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCCACCCTCCACCCTTGCAACCTCTTCCCCAAATAAAATAAGATAG-AA  49

seq1  AGAAAATCTTGTTGTGGAAGCTGTAGTGTGTCACAGTATGTCACCCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCTTGTTGTGGAAGCTGTAGTGTGTCACAGTATGTCACCCAGTA  99

seq1  CACCCTTTGTCCACATTTCTTTACCTGCCGATGCTCATTGCAATGAGTT-  149
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CACCCTTTGTCCACATTTCTTTACCTGCCGATGCTCATTGCAATGAGTTA  149

seq1  ATTGGTCTGTTTCAAGGTCTTTAGCTTCCAGGACACTATCTATACTGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTGTTTCAAGGTCTTTAGCTTCCAGGACACTATCTATACTGGAT  199

seq1  CTTCACTGGGACTTTTCTGTATATCCTGTTACTGACCTGTGTTGTGGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGGGACTTTTCTGTATATCCTGTTACTGACCTGTGTTGTGGAAA  249

seq1  TCCTGCAGCTTTGGACCTGTGGCCCTTTTACATGCTTCAGAAGATAATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGCTTTGGACCTGTGGCCCTTTTACATGCTTCAGAAGATAATAA  299

seq1  ATGGGGTTGATGTTGGGGTGGGCTAACTCAAAGTCCTGGGTCTGGGACTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTGATGTTGGGGTGGGCTAACTCAAAGTCCTGGGTCTGGGACTA  349

seq1  GTAGGCATGAGCAGTAAAAATTTATTTAAATAGTAAAAGCTGTTTTCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCATGAGCAGTAAAAATTTATTTAAATAGTAAAAGCTGTTTTCCTG  399

seq1  TAATAAAAGAATTCTATGTCATTCATCATGTGAGCAAAGCATTTGGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAGAATTCTATGTCATTCATCATGTGAGCAAAGCATTTGGAAGA  449

seq1  AAACATCTGATTATTTTCTAGACCCGCAGAGAGCATTTAGTAAAATTTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTGATTATTTTCTAGACCCGCAGAGAGCATTTAGTAAAATTTAT  499

seq1  TAGTTTAAAATAATCAGATTTGAAGACAACATTTTGAATTTTACAAAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAAATAATCAGATTTGAAGACAACATTTTGAATTTTACAAAAGG  549

seq1  AATGCTTCAATATCTGCATTCAGATAATAAGAGCAATATGATCAAAACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCAATATCTGCATTCAGATAATAAGAGCAATATGATCAAAACAG  599

seq1  TTACTAAGATCACAAAATGGCAAGATGTACACACATTGATATATGAATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGATCACAAAATGGCAAGATGTACACACATTGATATATGAATTA  649

seq1  ACTATAAATTGTTGCCATTTAAATACAGCAAGAGGGCTGGAGAGGTGGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAATTGTTGCCATTTAAATACAGCAAGAGGGCTGGAGAGGTGGCT  699

seq1  CAGCAGTTAAAAGCACTGCCTGCTCTTCCAAAGGTCCTGAATTCAAACCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTAAAAGCACTGCCTGCTCTTCCAAAGGTCCTGAATTCAAACCC  749

seq1  CAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACACCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACACCCT  799

seq1  CTCCTGGAATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGAATGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA  849

seq1  ATAAATCTTTTAAAAAAATAAAATAATATCCAGAGAAATAAGAGCAGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTTTAAAAAAATAAAATAATATCCAGAGAAATAAGAGCAGTAT  899

seq1  CAATTTGTCAATATCAAGAGTGTTAATAGAAAATGTTTTTGTACGTCTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTCAATATCAAGAGTGTTAATAGAAAATGTTTTTGTACGTCTAT  949

seq1  ATAAACACTGATCACAATTAAGCAACTTTTCACTACACAATAGTAACAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACTGATCACAATTAAGCAACTTTTCACTACACAATAGTAACAGA  999

seq1  ATTC  1003
      ||||
seq2  ATTC  1003