BAC Information

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BAC

Clone NameB6Ng01-334F19
Chromosome1 (Build37)
Map Location 66,205,353 - 66,206,516
singlet/doubletsinglet
Overlap genenone
Upstream geneIdh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786
Downstream geneMtap2, C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334F19.bB6Ng01-334F19.g
ACCGA119883GA119884
length1,1531,151
definitionB6Ng01-334F19.b B6Ng01-334F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtgggtgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccggaagatgccccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccataagctggaaagaacctagat
gcccctcaacagaagaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttataaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattccaaag
aaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgccccttcttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaggagctaaagggatctgcaccctata
gtggaacacattatgaactaaccagtacccgagctctgactctagctgca
tatatatcaaagatgctagtcgcatcactggaaagagaggcccatgactg
cactttatatgcccagtacaggaacccaaggcaaaaaggggggattgggt
gtg
gaattcaggcaggttggatccagtacctattctgtgaactaacgttaccc
attgagagaccacacccagcctcgaagactaaggcactacgtggttcttg
aaatctatggtgtggtttaaattctcttggttctgttcctcaggggaatc
ctcactaaaacaatgtatattattaagttttaaaattatgtgcacatgag
tacagatgctctgaggccaaagatttccctggaactggaattaggtggtt
gtcccctcgtaatagcgccaccgaagtttgttccctacaagaatagaaag
tactcaactgtttggctatttctccagccccttatgtgtacatcttgtca
ttgagatgctgtttctatcaaagttacacagtagagcattcaaataatga
gttttagaattgggaaaaagtcctgaaattgaacctgtgttatcttttta
ctagtcattgatgtttttcataaatttacttatgtttgaatgtaaagtcc
ttcttgaagtgcttagaactgtttgaaatcatgtaaatagctaagaggct
ttaactgaactagttctcctagacatgttagaaaagttgtttcctctatt
ttgagtacttttatctcacctttttacatttgatttctcaacttcatttt
atagcattttataggaaaaaaaatcaatattccatccttctctcttttga
ctcaataagccctaaattgtttatttttccctttccctttttggacttta
aatgtttcatttaggtaaaggcaaagtagggggctatgaagtaggggcta
cgtacaacttctgaaatgggatgttgacataaatacttcatacacagatt
ttttttattagttaacccttggtctttttgtttgttttttttttctttgc
acttaaaattttgtatattttacccaactatacaagcaaaggaatcatgt
attacatctgaagctactcaaagaccattttattccctgctatctttctg
aatgggaggagagagacgaagacgagagggtagttgtagtttctgtcttg
atgacatttttcgatgcaacatgacttactgttatgcattgagaactcct
agcaaggagaaatggtgtgtcattcaggaccaaaatggtatctcttggct
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_66205353_66206516
seq2: B6Ng01-334F19.g_67_1217 (reverse)

seq1  AAGCAAAGAGATTTAACATATTTGGTCCCTTGGAATGACACA-CATTTCT  49
      |||| ||||||  || ||| ||||||||    |||||||||| |||||||
seq2  AAGCCAAGAGA--TACCAT-TTTGGTCC---TGAATGACACACCATTTCT  44

seq1  CCTTGCTAGGATGTCTCCATTGCATAACAGTAAAGTCATGTTGCCATCG-  98
      |||||||||||  ||| || ||||||||||| ||||||||||| ||||| 
seq2  CCTTGCTAGGAGTTCT-CAATGCATAACAGT-AAGTCATGTTG-CATCGA  91

seq1  AAAATGTCATCCAAGACAGGAAACTACAACTACCCTCTCTGTCTTCCTTT  148
      |||||||||| ||||||| |||||||||||||||||||| |||||| | |
seq2  AAAATGTCAT-CAAGACA-GAAACTACAACTACCCTCTC-GTCTTCGTCT  138

seq1  CTTCTCTTCCTCCCATTCAGAAAGATAGCAGGGAATAAAATGGTCTTTGA  198
      ||     |||||||||||||||||||||||||||||||||||||||||||
seq2  CT----CTCCTCCCATTCAGAAAGATAGCAGGGAATAAAATGGTCTTTGA  184

seq1  GTAGCTTCAGATGTAATACATGATTCCTTTGCTTGTATAGTTGGGTAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTCAGATGTAATACATGATTCCTTTGCTTGTATAGTTGGGTAAAA  234

seq1  TATACAAAATTTTAAGTGC-AAGAAAAAAAAAACAAACAAAAAGACCAAG  297
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATACAAAATTTTAAGTGCAAAGAAAAAAAAAACAAACAAAAAGACCAAG  284

seq1  GGTTAACTAATAAAAAAAATCTGTGTATGAAGTATTTATGTCAACATCCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACTAATAAAAAAAATCTGTGTATGAAGTATTTATGTCAACATCCC  334

seq1  ATTTCAGAAGTTGTACGTAGCCCCTACTTCATAGCCCCCTACTTTGCCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAGTTGTACGTAGCCCCTACTTCATAGCCCCCTACTTTGCCTT  384

seq1  TACCTAAATGAAACATTTAAAGTCCAAAAAGGGAAAGGGAAAAATAAACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAATGAAACATTTAAAGTCCAAAAAGGGAAAGGGAAAAATAAACA  434

seq1  ATTTAGGGCTTATTGAGTCAAAAGAGAGAAGGATGGAATATTGATTTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGCTTATTGAGTCAAAAGAGAGAAGGATGGAATATTGATTTTTT  484

seq1  TTCCTATAAAATGCTATAAAATGAAGTTGAGAAATCAAATGTAAAAAGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATAAAATGCTATAAAATGAAGTTGAGAAATCAAATGTAAAAAGGT  534

seq1  GAGATAAAAGTACTCAAAATAGAGGAAACAACTTTTCTAACATGTCTAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAAGTACTCAAAATAGAGGAAACAACTTTTCTAACATGTCTAGG  584

seq1  AGAACTAGTTCAGTTAAAGCCTCTTAGCTATTTACATGATTTCAAACAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAGTTCAGTTAAAGCCTCTTAGCTATTTACATGATTTCAAACAGT  634

seq1  TCTAAGCACTTCAAGAAGGACTTTACATTCAAACATAAGTAAATTTATGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCACTTCAAGAAGGACTTTACATTCAAACATAAGTAAATTTATGA  684

seq1  AAAACATCAATGACTAGTAAAAAGATAACACAGGTTCAATTTCAGGACTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCAATGACTAGTAAAAAGATAACACAGGTTCAATTTCAGGACTT  734

seq1  TTTCCCAATTCTAAAACTCATTATTTGAATGCTCTACTGTGTAACTTTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATTCTAAAACTCATTATTTGAATGCTCTACTGTGTAACTTTGA  784

seq1  TAGAAACAGCATCTCAATGACAAGATGTACACATAAGGGGCTGGAGAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGCATCTCAATGACAAGATGTACACATAAGGGGCTGGAGAAAT  834

seq1  AGCCAAACAGTTGAGTACTTTCTATTCTTGTAGGGAACAAACTTCGGTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACAGTTGAGTACTTTCTATTCTTGTAGGGAACAAACTTCGGTGG  884

seq1  CGCTATTACGAGGGGACAACCACCTAATTCCAGTTCCAGGGAAATCTTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTATTACGAGGGGACAACCACCTAATTCCAGTTCCAGGGAAATCTTTG  934

seq1  GCCTCAGAGCATCTGTACTCATGTGCACATAATTTTAAAACTTAATAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAGCATCTGTACTCATGTGCACATAATTTTAAAACTTAATAATA  984

seq1  TACATTGTTTTAGTGAGGATTCCCCTGAGGAACAGAACCAAGAGAATTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTTTAGTGAGGATTCCCCTGAGGAACAGAACCAAGAGAATTTA  1034

seq1  AACCACACCATAGATTTCAAGAACCACGTAGTGCCTTAGTCTTCGAGGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACACCATAGATTTCAAGAACCACGTAGTGCCTTAGTCTTCGAGGCT  1084

seq1  GGGTGTGGTCTCTCAATGGGTAACGTTAGTTCACAGAATAGGTACTGGAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGTCTCTCAATGGGTAACGTTAGTTCACAGAATAGGTACTGGAT  1134

seq1  CCAACCTGCCTGAATTC  1164
      |||||||||||||||||
seq2  CCAACCTGCCTGAATTC  1151