BAC Information

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BAC

Clone NameB6Ng01-334L18
Chromosome1 (Build37)
Map Location 149,516,999 - 149,518,070
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334L18.bB6Ng01-334L18.g
ACCGA120166GA120167
length1,0611,201
definitionB6Ng01-334L18.b B6Ng01-334L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagttca
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ataggagtggatgagaatgaagattttctcttacaatctaaatgtcatat
caatttgataagaattatgttataattatgtctatttttgtactatattt
ttgagacttgatatttaaaatatagtcacttgtatatagctatctttttc
atttttaagaattattttattattctgtgatattttcaaatattgcttta
gttttcattaaaactactgaatatcaccaaaaaactatttttaaatatga
aatgaatacatgacccaactgtgaagtaaaaacatggaaaatatattggg
atattgaacaggaatttattcagtctttatgacagggcattctttttttc
tcttgatttttttttaaaattaggtatttatttcctttacatttccaatg
ctatcccagaagtcccccacatgctcccccacacactcgcccacccacgc
actcccacttcgtggccctggtgttcccctggactgaggcatataaaatt
tgctagaccactgggcctctctatccactgatggacgactaagccatttt
ctgaggcacaagcatctaaacacgtgaactcccggaggtgtgccctaaat
tagatgcaatgcaaaaaatgaagagaatgcatgatgtaatctttcttttg
ctgaatatctcgagatctagtatctcttacacacatatttttcacttaga
taaattatctgttgagaatgtatcatacaaaaaagaataacggtagactt
agttgattagtcagtgtatcacaatacattatattaaactggcgaattat
ggcaataatcttgattcaatgagtctttctatgttcaaattcaactgaca
tatcaaattgt
gaattctcagctgaggaatattgaatggccaagaagcaccgacataacaa
cagattctgaagaaatccaaaacaccatcagattcttctacaaaaggcta
tactcaacaaaactgaaaaacctggacgaaatggacaaatttctggacag
ataacaggtaccaaagttaaattaggatgaagttaacgatctaaacagtg
ccatatcccctaaagaaatagaagcagttattaatagtctcccagccaaa
agaagcccaggaccagacaggtttagtgcagagttctatcagaccttcaa
agaagatctaattccagttctgcataaactatttcacaaaataacagtag
aaggtactctacccaactcattttatgaagccacaattactctgatacct
aaaccacagaaagatccaacaaagatagagaacttcagaccaatttctct
tatgaatatcaatgaaaaaatactcaaaaaattctcgctaacccaatcca
agaacacattaaagcaatcatccatcctgaacaagtaggttttattccag
gaatgcagggatggtttaatatacgaaaatccatcaatgtaatccattat
ataaacaaactcaaagacaaaatttacatgatcatctcgttagatgcaga
aaaagcatttgagaatatccaacacccattcatgataaaagtcttggaaa
gatcaggaattcaaggacaatacctaaacatgataaaagcaatctacagc
aagccagtagccaacatcaaagtaaatggagagaagctggaagcaatccc
actaaattcagggactagacaaggctgcccacttttctccctaccttttc
aacatagtacttgaagtattagccagagcaattcgacaacaaaaggagat
caaggggatacaaattggaaaagaggaagtcaaaatatcactttttgcag
atgatatgatagtatatataagtgaccttaaaattccactagagaactcc
taaacctgataaacagcttccggtgaagtagctggaatataaatactcaa
agaagtcaatggccctttctctaccagattagcgactgagaaaggaatta
gggaacgacaccttctcaattagtccaacagtatatgacatctgccttga
actctaacctaggaggtgaaagaagaatcctgctagtgaatataaaaacc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149516999_149518070
seq2: B6Ng01-334L18.b_42_1102

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTTCA  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  ATAGGAGTGGATGAGAATGAAGATTTTCTCTTACAATCTAAATGTCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTGGATGAGAATGAAGATTTTCTCTTACAATCTAAATGTCATAT  250

seq1  CAATTTGATAAGAATTATGTTATAATTATGTCTATTTTTGTACTATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGATAAGAATTATGTTATAATTATGTCTATTTTTGTACTATATTT  300

seq1  TTGAGACTTGATATTTAAAATATAGTCACTTGTATATAGCTATCTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTTGATATTTAAAATATAGTCACTTGTATATAGCTATCTTTTTC  350

seq1  ATTTTTAAGAATTATTTTATTATTCTGTGATATTTTCAAATATTGCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGAATTATTTTATTATTCTGTGATATTTTCAAATATTGCTTTA  400

seq1  GTTTTCATTAAAACTACTGAATATCACCAAAAAACTATTTTTAAATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTAAAACTACTGAATATCACCAAAAAACTATTTTTAAATATGA  450

seq1  AATGAATACATGACCCAACTGTGAAGTAAAAACATGGAAAATATATTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATACATGACCCAACTGTGAAGTAAAAACATGGAAAATATATTGGG  500

seq1  ATATTGAACAGGAATTTATTCAGTCTTTATGACAGGGCATTCTTTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAACAGGAATTTATTCAGTCTTTATGACAGGGCATTCTTTTTTTC  550

seq1  TCTTGATTTTTTTTTAAAATTAGGTATTTATTTCCTTTACATTTCCAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTTTTTTTTAAAATTAGGTATTTATTTCCTTTACATTTCCAATG  600

seq1  CTATCCCAAAAGTCCCCCACATGCTCCCCCACACACTCCCCCACCCACGC  650
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  CTATCCCAGAAGTCCCCCACATGCTCCCCCACACACTCGCCCACCCACGC  650

seq1  ACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTACTGAGGCATATAAAATT  700
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  ACTCCCACTTCGTGGCCCTGGTGTTCCCCTGGACTGAGGCATATAAAATT  700

seq1  TGCAAGACCACTGGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATTTT  750
      ||| |||||||||||||||||| ||||||||||| |||||| ||||||||
seq2  TGCTAGACCACTGGGCCTCTCTATCCACTGATGGACGACTAAGCCATTTT  750

seq1  CTGATTCACATGCAGCTAAAGACATGAGCTCCGGGAGGTGTGCCCTAAAT  800
      ||||  |||| ||| ||||| || ||| |||| |||||||||||||||| 
seq2  CTGAGGCACAAGCATCTAAACACGTGAACTCCCGGAGGTGTGCCCTAAA-  799

seq1  TTTGATGCAGTTTTAAAAAATGAAGAGAAGGCATGATGTAATTTTTCTTT  850
      || ||||||  |  ||||||||||||||| |||||||||||| |||||||
seq2  TTAGATGCA-ATGCAAAAAATGAAGAGAATGCATGATGTAATCTTTCTTT  848

seq1  TGCTGAAATATTAAGAGATATAGTACATTTTATAAAC-TATTATTCACAT  899
      ||||| |||||   ||||| |||||  | ||| | || |||| ||||| |
seq2  TGCTG-AATATCTCGAGATCTAGTATCTCTTACACACATATTTTTCACTT  897

seq1  AGATTAATTAAATTGTATGTT--ATATATAACATAGAAAAAAGAATACCT  947
      |||     |||||| | ||||    || || |||| ||||||||||| | 
seq2  AGA-----TAAATTATCTGTTGAGAATGTATCATACAAAAAAGAATAACG  942

seq1  ATTGATTTTGGTTGAATTTTTCTGTTTATCATAGTATATTATATTATAAC  997
       | ||  || |||| |||  || || ||||| | || ||||||||| |||
seq2  GTAGA-CTTAGTTG-ATTAGTCAGTGTATCACAATACATTATATTA-AAC  989

seq1  TGGCAAATTATGTCATTAATTCATGCATTCAATGTGTATTTCTATGTTCT  1047
      |||| ||||||| || ||| || || |||||||| || ||||||||||| 
seq2  TGGCGAATTATGGCAATAA-TCTTG-ATTCAATGAGTCTTTCTATGTTC-  1036

seq1  AAATTTAACGGACATATTAAATTGT  1072
      ||||| ||| ||||||| |||||||
seq2  AAATTCAACTGACATATCAAATTGT  1061