MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-335C10
Chromosome	1 (Build37)
Map Location	30,654,747 - 30,655,062
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040665, LOC665944
Downstream gene	EG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins

name	LOC665944 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG624138 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624138 MGI:3645176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 71 Proteins pseudo : _no_value

name	LOC100040699 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Phf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213109 MGI:2446126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG638995 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638995 MGI:3643372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Ptp4a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19243 MGI:1277096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG435615 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435615 MGI:3649020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	LOC669402 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669402
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG435616 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435616 MGI:3648192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	4931428L18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70988 MGI:1918238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666020 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gluld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:266744 MGI:2672844
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930521A18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74708 MGI:1921958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG226957 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226957 MGI:3647946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	EG624262 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624262 MGI:3646684
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC624275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040665 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233776 GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins product : similar to Electron transferring flavoprotein, alpha polypeptide transcript_id : XM_001475043.1

name	Phf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487308 GeneID:213109 MGI:2446126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 3 transcript_id : NM_001081080.1

name	EG638995 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363264 GeneID:638995 MGI:3643372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, EG638995 transcript_id : XM_980826.1

name	Ptp4a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606373 GeneID:19243 MGI:1277096
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase 4a1 transcript_id : NM_011200.2

name	EG435615 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233795 GeneID:435615 MGI:3649020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG435615, transcript variant 1 transcript_id : XM_487585.3

name	EG435615 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233796 GeneID:435615 MGI:3649020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG435615 transcript_id : XM_001475582.1

name	EG435616 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82878785 GeneID:435616 MGI:3648192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG435616, transcript variant 2 transcript_id : XM_897758.1

name	EG435616 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51705099 GeneID:435616 MGI:3648192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG435616, transcript variant 1 transcript_id : XM_487586.1

name	4931428L18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351986 GeneID:70988 MGI:1918238
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931428L18 gene transcript_id : NM_027637.2

name	Gluld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956409 GeneID:266744 MGI:2672844
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate-ammonia ligase (glutamine synthetase) domain containing 1 transcript_id : NM_153601.1

name	4930521A18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461993 GeneID:74708 MGI:1921958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930521A18 gene transcript_id : NM_029062.2

name	EG226957 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363271 GeneID:226957 MGI:3647946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : predicted gene, EG226957 transcript_id : XM_129787.5

name	LOC100040665 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233777 GeneID:100040665
definition	codon_start : 1 product : similar to Electron transferring flavoprotein, alpha polypeptide protein_id : XP_001475093.1

name	Phf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487309 GeneID:213109 MGI:2446126
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : PHD finger protein 3 protein_id : NP_001074549.1

name	EG638995 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363265 GeneID:638995 MGI:3643372
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985920.1

name	Ptp4a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755226 CCDS:CCDS14858.1 GeneID:19243 MGI:1277096
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005768 - endosome [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004727 - prenylated protein tyrosine phosphatase activity [Evidence TAS]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030335 - positive regulation of cell migration [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : protein tyrosine phosphatase 4a1 protein_id : NP_035330.1

name	EG435615 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233797 GeneID:435615 MGI:3649020
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II protein_id : XP_001475632.1

name	EG435615 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51705096 GeneID:435615 MGI:3649020
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_487585.1

name	EG435616 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878786 GeneID:435616 MGI:3648192
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 2 protein_id : XP_902851.1

name	EG435616 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51705100 GeneID:435616 MGI:3648192
definition	codon_start : 1 product : similar to RNA and export factor binding protein 1-II isoform 1 protein_id : XP_487586.1

name	4931428L18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746163 GeneID:70988 MGI:1918238
definition	codon_start : 1 product : hypothetical protein LOC70988 protein_id : NP_081913.1

name	Gluld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956410 CCDS:CCDS14859.1 GeneID:266744 MGI:2672844
definition	GO_function : GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006542 - glutamine biosynthesis [Evidence IEA]; GO:0006807 - nitrogen compound metabolism [Evidence IEA] codon_start : 1 note : lengsin product : glutamate-ammonia ligase (glutamine synthase) domain containing 1 protein_id : NP_705829.1

name	4930521A18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78214323 GeneID:74708 MGI:1921958
definition	codon_start : 1 product : hypothetical protein LOC74708 protein_id : NP_083338.1

name	EG226957 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363272 GeneID:226957 MGI:3647946
definition	codon_start : 1 product : similar to Chain A, The Solution Structure Of The Ref2-I Mrna Export Factor (Residues 1-155). protein_id : XP_129787.3

name	LOC665944 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665944
definition	number : 1 pseudo : _no_value

name	LOC100040699 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040699
definition	number : 2 pseudo : _no_value

name	LOC100040699 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040699
definition	number : 1 pseudo : _no_value

name	LOC669402 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669402
definition	number : 2 pseudo : _no_value

name	LOC669402 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669402
definition	number : 1 pseudo : _no_value

name	LOC666020 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666020
definition	number : 1 pseudo : _no_value

name	EG624262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624262
definition	number : 1 pseudo : _no_value

name	EG624262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624262
definition	number : 2 pseudo : _no_value

name	EG624262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624262
definition	number : 3 pseudo : _no_value

name	EG624262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624262
definition	number : 4 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128892
definition	standard_name : D1Mit526

name	(CDS detail)
type	STS
link
xref	UniSTS:158782
definition	standard_name : AI315311

name	(CDS detail)
type	STS
link
xref	UniSTS:210209
definition	standard_name : RH136214

name	(CDS detail)
type	STS
link
xref	UniSTS:178367
definition	standard_name : AU020177

name	(CDS detail)
type	STS
link
xref	UniSTS:162992
definition	standard_name : RH126284

name	(CDS detail)
type	STS
link
xref	UniSTS:167289
definition	standard_name : AU015919

name	(CDS detail)
type	STS
link
xref	UniSTS:190517
definition	standard_name : fb37c12.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:128567
definition	standard_name : D1Mit225

name	(CDS detail)
type	STS
link
xref	UniSTS:488911
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207142
definition	standard_name : BB015332

name	(CDS detail)
type	STS
link
xref	UniSTS:225143
definition

name	EG624138 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363263 GeneID:624138 MGI:3645176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 71 Proteins product : predicted gene, EG624138 pseudo : _no_value transcript_id : XR_001811.1

name	LOC624275 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233779 GeneID:624275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 9 Proteins product : similar to peroxisomal N1-acetyl-spermine/spermidine oxidase pseudo : _no_value transcript_id : XR_035669.1

clone name	MSMg01-433H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-070B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-150H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-335C10.b	B6Ng01-335C10.g
ACC	GA120469	GA120470
length	316	1,167
definition	B6Ng01-335C10.b	B6Ng01-335C10.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	tttctcaagcttcagagtgttttacaagtcctctcattaattcttctgtg caataaaaattgaaaggtggcattgatgctttagctaaaggttaataatt tcacaggcagtggcggtgcatgtctttaattccagcacttgggaggcaga ggtaggcagatttctgagttcaaggccagcctcatctacagaatgagttc caggacagccagggctatacagacaaaccttgtctcaaaaaagaaagaga gagagagagagagagagagagagagagagagagagagagagagagagaga gaggaagggagagaga	gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaagttcaggtgacagc agaagctggcgaggatgtggagaaagaggaacactccttcattgctggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc atatatccagaagatgttccaaccggtaagaagggacacatgctccacta tgttcatagcagccttacttataatagctagaagctggaaagatcccaga tggccctcaacagaggaatggatacagaaaatgtggtacatttatacaat ggagcactactcagctattaaaaagaatgaatttatgaaattcctaggca aatggatgaatctggagggcattaccctgagtgaggtaacccaatcacaa aacagctcccattatatgtactcactgttatgtggatattagcccagaaa cttagaatacccaagatataagttacaatttgcaaaacacataaaactca agaagaacgaagaccaaagtgtggacactttgccccgtcttagaattggg aacaaaacacccatggaaggggttacagagacaaagtttggagctgagac aaaaggatggaccatctagagactgccatatccagggatctgtcccataa tcagcctccaaacgctgacaccattgcacacactagcaagattttgctga aaggatccctgatatagctgtctcttgtgagactatgccgggtcctagca aacacagaagtggatgctcacagtcagctattggatggatcacagggccc caatggaggagctaacgaaaatacccagggagctaaaggacctgcaaccc tatagtggaacacattatgactacctgtaccccggagcctcttgactcta gctgcatatgtatgaaaagatgcctagtgtcattcactggaagagaggcc cattgacttgctaattatattgccagtacaggatcccaggctaaatggga atgggtgtggtatacgt
quality values	Open. Hide. 43 62 62 43 62 44 26 47 62 62 62 62 59 36 62 62 62 62 62 62 62 49 59 62 59 49 49 56 54 56 62 62 62 62 59 59 62 59 62 62 62 62 62 62 49 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 49 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 43 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 38 38 38 38 44 58 43 34 22 38 43 38 38 40 40 40 43 49 40 49 49 49 40 40 43 41 39 52 44 58 39 38 44 58 54 26 12 6	Open. Hide. 62 47 56 44 62 62 62 59 59 59 59 59 49 33 29 38 43 59 49 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 54 62 62 59 62 62 62 62 62 54 49 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 54 54 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 46 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 43 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 47 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 49 58 58 39 42 58 58 58 58 58 58 58 58 58 46 58 58 47 54 54 58 54 54 58 58 58 58 58 54 58 58 54 54 54 46 58 48 58 47 58 52 58 58 58 52 58 42 54 58 43 47 58 58 58 58 58 58 51 51 58 58 53 51 52 58 58 54 50 58 58 58 50 58 58 58 58 58 50 51 54 54 58 58 46 53 53 51 51 54 50 58 58 54 52 50 58 58 52 51 58 58 53 50 58 39 37 52 50 58 54 52 58 51 51 41 39 51 51 58 40 51 51 50 47 20 50 58 58 58 51 53 36 58 58 53 50 50 44 29 49 52 58 58 51 52 58 50 51 46 37 58 49 32 58 40 33 37 58 51 37 46 27 51 32 58 53 53 53 54 42 58 40 46 40 40 50 51 58 33 43 50 31 31 28 50 52 53 45 49 52 32 54 42 45 54 53 52 50 46 42 42 38 54 54 29 39 39 49 42 30 29 42 50 54 47 44 16 54 54 40 28 35 31 45 39 52 54 37 33 38 29 54 44 33 39 54 36 35 37 51 24 37 41 39 51 13 33 35 31 54 54 33 27 52 31 24 44 32 14 10 42 30 52 53 42 37 25 51 32 32 33 31 53 33 47 31 42 30 45 32 32 26 44 47 32 20 26 32 31 52 31 32 52 40 30 53 43 34 32 40 32 31 52 45 40 31 53 31 51 30 33 30 31 31 30 31 22 21 27 28 21 31 31 39 31 26 28 24 30 23 31 36 36 32 43 29 32 19 31 13 51 51 33 33 31 32 26 31 46 25 11 38 23 16 6 46 29 30 30 31 23 23 31 26 28 32 31 31 24 30 31 31 31 28 43 26 24 34 17 34 17 31 28 22 30 31 28 22 46 33 32 37 30 31 31 11 36 32 48 32 26 18 31 31 24 31 33 21 23 32 22 14 12 22 21 34 32 27 26 18 34 35 30 21 22 32 38 20 24 38 18 29 17 18 31 24 27 33 22 23 24 16 29 44 15 23 43 41 31 8 20 23 25 29 22 12 6 29 10 19 42 23 21 22 22 33 48 48 21 32 21 21 39 24 18 26 48 22 15 7 25 33 11 31 4 4 4 6 11 18 19 31 32 15 19 22 39 20 7 13 25 8 16 4 13 25 10 21 11 21 9 15 32 17 20 26 10 24 6 10 31 4 13 13 20 11 16 28 34 34 23 12 9 27 13 27 6 6 8 9 28 27 7 11 14 23 24 19 19 19 11 23 27 11 7 7 17 16 9 19 28 13 15 21 34 14 17 28 11 4 3 6 10 12 3 4 3 3 3 9 8 13 20 9 7 11 8 2 5 3 7 6 4 7 5 17 7 28 11 5 16 13 6 5 10 7 21 16 10 5 18 12 3 10 4 5 8 5 15 6 9 3 4 6 15 5 8 4 12 3 3 3 12 12 7 5 20 7 3 5 25 30 5 1 3 30 14 2 6 4 6 21 15 8 6 7 22 14 3 3 4 7 8 14 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_30654747_30655062
seq2: B6Ng01-335C10.b_55_370

seq1  TTTCTCAAGCTTCAGAGTGTTTTACAAGTCCTCTCATTAATTCTTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAGCTTCAGAGTGTTTTACAAGTCCTCTCATTAATTCTTCTGTG  50

seq1  CAATAAAAATTGAAAGGTGGCATTGATGCTTTAGCTAAAGGTTAATAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAATTGAAAGGTGGCATTGATGCTTTAGCTAAAGGTTAATAATT  100

seq1  TCACAGGCAGTGGCGGTGCATGTCTTTAATTCCAGCACTTGGGAGGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGCAGTGGCGGTGCATGTCTTTAATTCCAGCACTTGGGAGGCAGA  150

seq1  GGTAGGCAGATTTCTGAGTTCAAGGCCAGCCTCATCTACAGAATGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCAGATTTCTGAGTTCAAGGCCAGCCTCATCTACAGAATGAGTTC  200

seq1  CAGGACAGCCAGGGCTATACAGACAAACCTTGTCTCAAAAAAGAAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTATACAGACAAACCTTGTCTCAAAAAAGAAAGAGA  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  300

seq1  GAGGAAGGGAGAGAGA  316
      ||||||||||||||||
seq2  GAGGAAGGGAGAGAGA  316

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information