BAC Information

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BAC

Clone NameB6Ng01-336B06
Chromosome1 (Build37)
Map Location 125,591,147 - 125,592,340
singlet/doubletsinglet
Overlap geneDpp10
Upstream geneLOC666983
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336B06.bB6Ng01-336B06.g
ACCGA121117GA121118
length1,2031,188
definitionB6Ng01-336B06.b B6Ng01-336B06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggctggtctatgagtatgtttgtgattgaaattatttgatag
taccatccataccagaataggctaaatgacaatgaagatagcctcctcca
gacattttcacaagtcaatctgatctagacaattcctcaattaagaatcc
tttctcaggtgtttctaagttctgtcaacttgacagttcaagttaactaa
gacagtgggtgatagccaaatagaaaattttactgtaggggataaagata
ttgactgatgatattcttatcgcttatgttagtggcgtgcttacgtttac
actttccaaagctattttgttattgctgttttctttggaatctttctctg
atagtggaaaacataggttttcctaacataggttagacatagaaatgaac
aatgagtgaatattaaggagactaaagatagtgcaagatagggtaactca
ggatctacaacatgccaattctatcggatctcaaagttctaatcagactt
gaaattttttctaccctgagaactacaatggaaacataattaattctttg
aaagcagaaataagatgattgatgaagttttctgttaattgtttcctcac
agaagcaccatgttgaagttgctaatgtacaatcaaatgtgataaaacat
taaaactcaaggtcaaaacacctactcttggtatatcaaaaataaacaag
atattgaagaaaacaagaagaaaagagttggctacatcatccatttctct
gcttcaagctgccaagcttggagagaaatgccttttggttggagaaggaa
gaaataatttagttcaactattacacttgcaacccagtacagtgtaagct
gagcacctaaaattataagggtcaatttccacccacatcattcagcaagg
cctcatgttctaaagattctgcaaaccttttcaaacagtgctactaactg
gagacaatgtgggcaagcacactagtatgtacaggaaatttcacattctg
atcacgacatgtgcatatgaaatttggagacatggatagagctgagtagc
cacagattcaaagcatttgttgtccattttattgagtttaatatatacag
ttgttttgtaaatctcctcagagtcattcagcatggttgttcagtacaat
ggatcactcagagaagaagttaggtaaggtacattgatgcaagagctgag
ctt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccaggagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagctagagaaagtaccccagagctaatgggatcttcaaccctat
agtgacaacatatgactaccagtacccctgagctctgactctagctgcat
atgtatcaaagatgcctagtcgccatcactgcaagagaagcccaatgacc
gcctaacttgtgtgcccggtacaggatgcagccatggggaattggaagct
cgagaacatgtcccatgcgtttaactggtagactcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125591147_125592340
seq2: B6Ng01-336B06.b_51_1253 (reverse)

seq1  AAGCTCAGCTCTTGCCTTCATTTTCC-TACCTA--CTCTTCTCTGAGTGA  47
      ||||||||||||||| |  || | || ||||||   ||||||||||||||
seq2  AAGCTCAGCTCTTGCATCAATGTACCTTACCTAACTTCTTCTCTGAGTGA  50

seq1  T-CATTGTACTGA--CACCATGCTGATTGACTCTGGAGGAGATTTAC-AA  93
      | |||||||||||   |||||||||| ||||||| |||||||||||| ||
seq2  TCCATTGTACTGAACAACCATGCTGAATGACTCT-GAGGAGATTTACAAA  99

seq1  ACAACTG--TATATTAAACTCAATAGATTGGAC-ACAAATGCTTTGAATC  140
      |||||||  |||||||||||||||| | ||||| ||||||||||||||||
seq2  ACAACTGTATATATTAAACTCAATAAAATGGACAACAAATGCTTTGAATC  149

seq1  TGTGGCTACTTCAGCTCTATCCATGTCTCCAAATTTCATATGCACATGTC  190
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTAC-TCAGCTCTATCCATGTCTCCAAATTTCATATGCACATGTC  198

seq1  GTGATCAGAATGTGAAATTTCCTGTACATACTAGTGTGCTTGCCCACATT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGAATGTGAAATTTCCTGTACATACTAGTGTGCTTGCCCACATT  248

seq1  GTCTCCAGTTAGTAGCACTGTTTG-AAAGGTTTGCAGAATCTTTAGAACA  289
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTCCAGTTAGTAGCACTGTTTGAAAAGGTTTGCAGAATCTTTAGAACA  298

seq1  TGAGGCCTTGCTGAATGATGTGGGTGGAAATTGACCCTTATAATTTTAGG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTTGCTGAATGATGTGGGTGGAAATTGACCCTTATAATTTTAGG  348

seq1  TGCTCAGCTTACACTGTACTGGGTTGCAAGTGTAATAGTTGAACTAAATT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGCTTACACTGTACTGGGTTGCAAGTGTAATAGTTGAACTAAATT  398

seq1  ATTTCTTCCTTCTCCAACCAAAAGGCATTTCTCTCCAAGCTTGGCAGCTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCCTTCTCCAACCAAAAGGCATTTCTCTCCAAGCTTGGCAGCTT  448

seq1  GAAGCAGAGAAATGGATGATGTAGCCAACTCTTTTCTTCTTGTTTTCTTC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGAGAAATGGATGATGTAGCCAACTCTTTTCTTCTTGTTTTCTTC  498

seq1  AATATCTTGTTTATTTTTGATATACCAAGAGTAGGTGTTTTGACCTTGAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTGTTTATTTTTGATATACCAAGAGTAGGTGTTTTGACCTTGAG  548

seq1  TTTTAATGTTTTATCACATTTGATTGTACATTAGCAACTTCAACATGGTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGTTTTATCACATTTGATTGTACATTAGCAACTTCAACATGGTG  598

seq1  CTTCTGTGAGGAAACAATTAACAGAAAACTTCATCAATCATCTTATTTCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGAGGAAACAATTAACAGAAAACTTCATCAATCATCTTATTTCT  648

seq1  GCTTTCAAAGAATTAATTATGTTTCCATTGTAGTTCTCAGGGTAGAAAAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAAAGAATTAATTATGTTTCCATTGTAGTTCTCAGGGTAGAAAAA  698

seq1  ATTTCAAGTCTGATTAGAACTTTGAGATCCGATAGAATTGGCATGTTGTA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGTCTGATTAGAACTTTGAGATCCGATAGAATTGGCATGTTGTA  748

seq1  GATCCTGAGTTACCCTATCTTGCACTATCTTTAGTCTCCTTAATATTCAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGAGTTACCCTATCTTGCACTATCTTTAGTCTCCTTAATATTCAC  798

seq1  TCATTGTTCATTTCTATGTCTAACCTATGTTAGGAAAACCTATGTTTTCC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTCATTTCTATGTCTAACCTATGTTAGGAAAACCTATGTTTTCC  848

seq1  ACTATCAGAGAAAGATTCCAAAGAAAACAGCAATAACAAAATAGCTTTGG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGAGAAAGATTCCAAAGAAAACAGCAATAACAAAATAGCTTTGG  898

seq1  AAAGTGTAAACGTAAGCACGCCACTAACATAAGCGATAAGAATATCATCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTAAACGTAAGCACGCCACTAACATAAGCGATAAGAATATCATCA  948

seq1  GTCAATATCTTTATCCCCTACAGTAAAATTTTCTATTTGGCTATCACCCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATCTTTATCCCCTACAGTAAAATTTTCTATTTGGCTATCACCCA  998

seq1  CTGTCTTAGTTAACTTGAACTGTCAAGTTGACAGAACTTAGAAACACCTG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGTTAACTTGAACTGTCAAGTTGACAGAACTTAGAAACACCTG  1048

seq1  AGAAAGGATTCTTAATTGAGGAATTGTCTAGATCAGATTGACTTGTGAAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGATTCTTAATTGAGGAATTGTCTAGATCAGATTGACTTGTGAAA  1098

seq1  ATGTCTGGAGGAGGCTATCTTCATTGTCATTTAGCCTATTCTGGTATGGA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGAGGAGGCTATCTTCATTGTCATTTAGCCTATTCTGGTATGGA  1148

seq1  TGGTACTATCAAATAATTTCAATCACAAACATACTCATAGACCAGCCTTG  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTATCAAATAATTTCAATCACAAACATACTCATAGACCAGCCTTG  1198

seq1  AATTC  1194
      |||||
seq2  AATTC  1203


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