BAC Information

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BAC

Clone NameB6Ng01-336B10
Chromosome1 (Build37)
Map Location 130,803,039 - 130,803,737
singlet/doubletsinglet
Overlap genenone
Upstream geneRab3gap1, Zranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336B10.bB6Ng01-336B10.g
ACCGA121125GA121126
length1,2171,205
definitionB6Ng01-336B10.b B6Ng01-336B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgcaatttgcatgccatgttattacaagagtttgttacaagta
aaagaaaaattaatattcaaaaaatcagggtctttaaaaagtaacatgta
tgtggttcttgtcattagttggctctttcctcaaaatctgttccacactt
tacccttgcacattctgtaggcagtacaaattgtagctttgaggttttgt
ggctggattggtatcccagctcctccactggaagtcttgtggatgtggga
catggctgactcatgccctataaaccccattgtaagatccctgaaagttt
ccattgtcctaggtttttagcttgttccaaagatgctctcccaatccagt
tgtatctttcagtactctcttgctcaagtcattcccacccacctcatcct
tcatgttcccaccctacttcctctcttaaccagtctctacattcggttcc
ccacgtctgatttccacttctctgtgcactgtgcccttcaagtgtcccac
cttgggctctccttgtagcttagcttctgtgtctgtggttggcagtatgg
ttatcctgtattttatgacttatatccacttataagtaagtacataacac
atttgtctttctaggtctgaacctcactcaggactatcttttcgagttcc
aaccatttgcctgcacatttcatgtcattacttttaatggctaagtaata
atccattgtataatgtacacttgctttatccattctttggttgagggaca
cctaggttgttcccagtttctgactcttatgaattaagctgctacgaaca
tagctgaacaagtgtgcttgtcgtatggtggagcatcttttgggtatatg
ctcaagagcggtatagctgggtattcaggtaaaacttccaattttctgaa
aaactgccaaattgatttccagagtctttgtacaagtttgcactcccact
agcaatggaagtgtccccttgctctacatcctccctagcataacttgtca
cttgagttttggttttggttttttgtttgttgtttgttccttttaaatct
tagccatctgatgatcacagagttcttttagcttgacttttctgaatgac
agatcctggaccatttcttagtgcttctcagacaatttagaagttctctg
tgggaatgctgttagcttgaacacaatttatatttggagttaattgagtt
aattgagtgtccatgat
gaattcattgctggtatatatgaagggtagtgtttggtttgtttgttagt
attgattttgtatcttgtaactctactgtgtatattagatctaagaattt
tcatatagactctacaggctcttttaattatggaatcgtgtcatctgcga
ataaaaataatttaactccttcctttcctactttcatcccattgctgtct
ttcttttctttaattgcttttatacttcaagaactatttttaaaaagcgt
ttcctctaaaatcagaaacaagatgggaaacaccattagtttgtttctgt
ctagtaaaatgttggcatagctttgttatatatcgcctttattatcttga
atcgcctttataatcctgagatatgctccatctgtccctaatgcctcaag
gatttttatcatgagagcactttgaactttgttgaatgctttccagcacc
aaccaagatgatgatatgatttctgcctttttatttgtagagtatatagc
atttattgatttacatatatgtagaaccatacttgcatttctgggatgaa
gctcacttgatcatgatgcatgatcatattggtatgtttctgaatttagt
ttgaaagtattttgtcgataatttttgcatttatgtttatcagagaaatt
gatttgtggtttcctttttgttgggtctttaccttattttgttaccagga
taatcctgactccacagatggaatttggtagtgtttcatctctttctgtt
ttgtggaacaaattaagaaggatcaacattagagttttcttgaaagtttg
atagaattcatgagtgaataaccctggtctcaggcttatttttctgacta
gactttcaattatagctttttatctcattgtttgtatgatttatctatat
ctcctagatttaattttagcagatcattatgcatttagaaattcatccat
tttcccccctacattttccagcctttttagagaattgttgaaaacatact
ctgaaatgtttagtcttttgtttcctggactgtggggagtcatgtacctt
cacccttcttgccattgttacttcttcccccacccacattgaaactgcaa
cctcctcaaacttctggagccagaataagcacctttgttccttgattgtt
tttgatagtggctttgttatatccaatgagagaaagtcccactgaatggt
tatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_130803039_130803737
seq2: B6Ng01-336B10.g_556_1273

seq1  TAGAGTATATAGCATTTATTGATTTACATATATGTAGAACCATACTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTATATAGCATTTATTGATTTACATATATGTAGAACCATACTTGCA  50

seq1  TTTCTGGGATGAAGCTCACTTGATCATGATGCATGATCATATTGGTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGATGAAGCTCACTTGATCATGATGCATGATCATATTGGTATGT  100

seq1  TTCTGAATTTAGTTTGAAAGTATTTTGTCGATAATTTTTGCATTTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATTTAGTTTGAAAGTATTTTGTCGATAATTTTTGCATTTATGTT  150

seq1  TATCAGAGAAATTGATTTGTGGTTTCCTTTTTGTTGGGTCTTTACCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGAAATTGATTTGTGGTTTCCTTTTTGTTGGGTCTTTACCTTAT  200

seq1  TTTGTTACCAGGATAATCCTGACTCCACAGATGGAATTTGGTAGTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTACCAGGATAATCCTGACTCCACAGATGGAATTTGGTAGTGTTTC  250

seq1  ATCTCTTTCTGTTTTGTGGAACAAATTAAGAAGGATCAACATTAGAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTCTGTTTTGTGGAACAAATTAAGAAGGATCAACATTAGAGTTT  300

seq1  TCTTGAAAGTTTGATAGAATTCATGAGTGAATAACCCTGGTCTCAGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAGTTTGATAGAATTCATGAGTGAATAACCCTGGTCTCAGGCTT  350

seq1  ATTTTTCTGACTAGACTTTCAATTATAGCTTTTTATCTCATTGTTTGTAA  400
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTTTCTGACTAGACTTTCAATTATAGCTTTTTATCTCATTGTTTGT-A  399

seq1  TGATTTATCTATATCTCCTAGATTTAATTTTAGCAGATCA-TATGCATTT  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGATTTATCTATATCTCCTAGATTTAATTTTAGCAGATCATTATGCATTT  449

seq1  AGAAATTCATCCA-TTTCCCCCCTACATTTTCCAGCC-TTTTAGAGAA-T  496
      ||||||||||||| ||||||||||||||||||||||| |||||||||| |
seq2  AGAAATTCATCCATTTTCCCCCCTACATTTTCCAGCCTTTTTAGAGAATT  499

seq1  GTTGAAAACATACTCTGAAAATGTTTAGTC-TTTGTTT-CTGGACTGT-G  543
      ||||||||||||||||| |||||||||||| ||||||| ||||||||| |
seq2  GTTGAAAACATACTCTG-AAATGTTTAGTCTTTTGTTTCCTGGACTGTGG  548

seq1  GGAGTCATGTACC-TCACCC-TCCTGCCATTGTTAC-TCTTCCCC--ACC  588
      ||||||||||||| |||||| || |||||||||||| ||||||||   ||
seq2  GGAGTCATGTACCTTCACCCTTCTTGCCATTGTTACTTCTTCCCCCACCC  598

seq1  ACAATG-AACTGCAA-CTCCTCAAAC-TCT-GAGCCAGAATAAGCACC-T  633
      ||| || |||||||| |||||||||| ||| ||||||||||||||||| |
seq2  ACATTGAAACTGCAACCTCCTCAAACTTCTGGAGCCAGAATAAGCACCTT  648

seq1  TGTTCCTTGAATTGTTTTGATAGGTGTTTTGTTATAT-CAATGAGAGAA-  681
      |||||||||| |  |||||||||  | |||||||||| ||||||||||| 
seq2  TGTTCCTTGATTGTTTTTGATAGTGGCTTTGTTATATCCAATGAGAGAAA  698

seq1  --GCCACTGATATGG-TATGG  699
         ||||||| |||| |||||
seq2  GTCCCACTGA-ATGGTTATGG  718