BAC Information

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BAC

Clone NameB6Ng01-336D10
Chromosome1 (Build37)
Map Location 50,830,018 - 50,830,506
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666962, EG666970, LOC100041993
Downstream geneTmeff2, Sdpr, LOC383504, Obfc2a, Myo1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336D10.bB6Ng01-336D10.g
ACCGA121205GA121206
length1,0041,184
definitionB6Ng01-336D10.b B6Ng01-336D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctctaagtttaattatttcctgctttctactcctcttgggtg
aatttgcttccttttattatagagcttttaggtgtgctgtcaaggtgcta
gtatatgctctctctagtatccttttgaaagtactcagagctatgagttt
tcctctcacaaattctttcattgtttcccataagtttgggtatattgtgg
cttcattttcattaagctctaaaaagtctttaatctttttctttatttct
tccttgaccaagttaatgagcagactgttgttcagcttccttgggaatgt
tggctttctattatttatgttgttattgaagatcagctttagtccgaggt
catctactatgatgcatgggataatttcagtaattttgtatctgttgagg
ccttttttctgaccaattatatggccaattttggagaagattatcatgaa
aggctgagaagaaggtatatcatttttttaggataaaatgttctgtagat
atctgttaaattcatttatttcatatcttctgttagtttcaatgtgcatc
tgtttggtttctatttccaggatctatttattcatgagaatggggtgttg
aaatctcccatgttattgtgtgaggtacaatgtgtgctttgagctttatt
agagattccttaatgaatgttgaagcccttgcctttggagcagagatatt
cagaattgagagttcatcttggaagatttttatctttgatgggtatgaac
tgtacctccttgtcttttctgataactttgggttagatgacgattttagt
ttatagtagaatggctactccagcttgtttcttcagactgtttgcttgga
aaaattttttccagccttttactctgaggtaagaaacataagttatgttt
cttttgctgtaattaaaacaccatgaaaagcaatttctatagagctcata
tagggttatagtccaaaggaatgaaaattcagcatggctgaagggatatc
agca

gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagataaaaaaattcaggtggca
gcagatgctggcgaggatgtggagaaagaggaacattcctccattgttgg
tgggattgaaagcttgtacaaccactctggaaatcagtctggtggttcct
cagaaaattggacatagtactaccggaggaacctgcaatacctctcctgg
gcatatatccagaagatgttccaacgggtaagaaggacacaagctccact
acattcatagcagccttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtaaatttacacaa
tgcagtactacacaactattaaaaagaatgaatttatgaaattcttagtc
aaatggatggacgtggaggcatcataatgagtgagataacccaatcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatcaattagctaaacgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagctacagagacaaagtttggagctgtgatg
aaaggatggaccatctagagactgccatatctggggatccatcccataat
cagcttccaaatgctgacaccattgcacacactagcaagattttgctgaa
aggaccctgatataggtgtctcttgtgagactatgccggggcctagcaag
cacagaagtggatgctcacagtcagctattggatggatcacaggccccca
atggaagagcagagaaagtacccaaggagctaaagggatctgcaacccta
tagtggacacatatgagtaccagtaccccagagcttcttgactctagctg
catatgtatcaaaagatggcctagtcgcatcatgaaagacagggtcatgg
atttgcaacttattatatccaggtacaggaatgcctagccacacgaattg
ggtgggctatgacgcattctttgctcttttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50830018_50830506
seq2: B6Ng01-336D10.b_67_552 (reverse)

seq1  TAACAGATATCTACAGAACATTTTATCGTAAAAAAA-AAAATAACTTCTT  49
      ||||||||||||||||||||||||||| ||||||||  | ||| ||||||
seq2  TAACAGATATCTACAGAACATTTTATCCTAAAAAAATGATATACCTTCTT  50

seq1  CTCAGCACCTCATGGT-ACCTTCTCCAAAATTGACCATATAATTGATCAC  98
      ||||||   ||||| | | |||||||||||||| ||||||||||| ||| 
seq2  CTCAGCCTTTCATGATAATCTTCTCCAAAATTGGCCATATAATTGGTCAG  100

seq1  AAAACAGGCCTCAAAAGATAAAAAAAAATATTGAAACTCTTCCATGCATC  148
      |||| ||||||||| ||||  | |||| || ||||| | | |||||||||
seq2  AAAAAAGGCCTCAACAGAT--ACAAAATTACTGAAATTATCCCATGCATC  148

seq1  CTATCAGGTCACCATGGACTAAGGCTGATCTTCAATAACAACATAAATAA  198
       ||  || | |||  ||||||| |||||||||||||||||||||||||||
seq2  ATAGTAGATGACCTCGGACTAAAGCTGATCTTCAATAACAACATAAATAA  198

seq1  TAGAAAGCCAACACTCATGTGGAAACTGAAAAACGTTCTTCTCAATAATA  248
      ||||||||||||| ||    |||| ||||| |||  ||| |||| |||  
seq2  TAGAAAGCCAACATTCCCAAGGAAGCTGAACAACAGTCTGCTCATTAA--  246

seq1  CATTGGTCAAGGAAGGAATAAATAATGAAATTAAAGACTTTTTAGAGTTT  298
        ||||||||||||| |||||| ||  | |||||||||||||||||| ||
seq2  -CTTGGTCAAGGAAGAAATAAAGAAAAAGATTAAAGACTTTTTAGAGCTT  295

seq1  AATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACAATGAAAGC  348
      ||||||||||||||||||| |||||||||||||||||| |||||||||| 
seq2  AATGAAAATGAAGCCACAATATACCCAAACTTATGGGAAACAATGAAAGA  345

seq1  ATTTTTAAGAGGAAAACTCATAGCTCTGAGTGCCTCCAAAAAGAAACTAG  398
      |||| | |||||||||||||||||||||||| | | ||||| || |||||
seq2  ATTTGTGAGAGGAAAACTCATAGCTCTGAGTACTTTCAAAAGGATACTAG  395

seq1  AGAGAGCACACACTAGCAGCTTGACAACACACCTAAAAGCTCTAGAACAA  448
      |||||||| | ||||||| ||||||| ||||||||||||||||| || ||
seq2  AGAGAGCATATACTAGCACCTTGACAGCACACCTAAAAGCTCTATAATAA  445

seq1  AAGGAAGCAAATTCACCCAAGAGGAGTAAATGGCAGGAAAT  489
      |||||||||||||||||||||||||||| |  |||||||||
seq2  AAGGAAGCAAATTCACCCAAGAGGAGTAGAAAGCAGGAAAT  486


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