BAC Information

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BAC

Clone NameB6Ng01-337A23
Chromosome1 (Build37)
Map Location 148,422,382 - 148,423,445
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337A23.bB6Ng01-337A23.g
ACCGA121798GA121799
length1,0581,160
definitionB6Ng01-337A23.b B6Ng01-337A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctggatatctggatcttataatttttccagctctcttcctcag
taatgccacagacagcagtgcaggacttgtgctgtgtatagttgcttatc
tgtcatttgtgacttgctcctgatcactttttacactagaaattaggagc
cactgaagaaggtaactgtttatcatcaattagggtgtaagtttttaact
gaataaagggagaaaatgattcataaagaatgactacttcatcctactaa
tatgcatgtcctgttttacatatcagttactatcaggtcaatgatataaa
cctcatgtacataatgaaattaaaatgaatacaaacataacattgtgctt
aggatatcatagaagctcaaaaatgtgagttattttaaatttgtatctat
catattttatgagacaatagaagtacatttcgttttgcatacagtttttc
tgttaaggcatatcccttggaatcactgttgatttctagagattcttgag
gcacataagggggccacagggagcagcaaggccaagaagtggcttgacgg
aagtttggttgagaaggtagccaaaattagtataaaccctaagtccaggg
ggaaaagacaatgatagtgttactcagtgagaagtcacagaccacataca
ttagtctactagagtgacacatagcagccttctggcttctcctttgcctc
cttggcttcctctttgccctctacttccaagtgaaatgtagtctctgatg
gaaaaaaattaatggaaataaaaaactgtgaaatttttgtatttatatgt
tgaaattatgacattctaagtactcgactaaaaaaaaaaatccccctgaa
agtgcaattctttaatgattccgttcctttctggaaccaattccttttat
tgtacacaaagtccgtgtgctctccaggaaatcacagaaaatcattattc
aagtgatatttgtaagcatatttttgtaagtacaagatatgaactaatac
aaatattagatggttaaatttacttcaaaataaaagtatgagcttggaaa
catatatt
gaattcttattatggttatgtatggcagactacatttcttaatagaagaa
agtccccccctccccataaaatcacttagagtaactgccaagtcactccc
atatacaggtatttaaaatggtttaggaagaagatcaatcaggctgtggt
ttaagaagaaactagagtattgcaatattcatgagaaggttagcaagagc
agaatgtcctaattagaactatggtttgggcatgaaagcccttgcctggg
agcataatgacctcacacctggcttctaagaatatatataggtgacgtta
gttagagctggctttgtctcaattgttccattgccaatttcctgctagcc
tttgtgtatgcattcttctgttttgagtagagtcattaagcctctggtaa
ccccaatgtaccttggctgatatgtcacctaatttctctgttttcttctc
taatataagtctgatgcttgctttgagaatttacattcaaatcaatgctc
ccttgtgttcctgtctgtttgtgaccaccccaccaactccttgcatacct
gggtaccggtaccctgattctcccatgggttgaggggccaactgaggcca
gtccatggcaaaggatcccagaaatagagacagacaattctgagatgcat
agcagcagtgtctatgagtataaagaacataccgatcatagtgtaaaata
ttattttttgaggaaatatcatttgacttttgcactgtgaacacccctag
aagaaaaatagatgttttagatacaaaaatatgacaattctttcaaatat
gtgatacatcattatgaaattcttaactatcagatggttggaatacttaa
agtcctaacatttgagggaaaaaaaattcacctaactgagatatctgtaa
ataataaccatagagaaacagtctaacagagcagctacttaaatgtcatg
caaagaaagagggtccagctaaaactatgtacacagagtaaaggacatta
ctttgagcaaatgatttcataaagtaataaataaaaataaaaataaaaac
atacaacatccatatagagaggttattaactagaatataaccaaatgtgt
cgagaatatagtagtgccattgatagtagattatttaaacacacacaggt
gagtctcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148422382_148423445
seq2: B6Ng01-337A23.b_45_1102

seq1  GAATTCCCTGGATATCTGGATCTTATAATTTTTCCAGCTCTCTTCCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGATATCTGGATCTTATAATTTTTCCAGCTCTCTTCCTCAG  50

seq1  TAATGCCACAGACAGCAGTGCAGGACTTGTGCTGTGTATAGTTGCTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCACAGACAGCAGTGCAGGACTTGTGCTGTGTATAGTTGCTTATC  100

seq1  TGTCATTTGTGACTTGCTCCTGATCACTTTTTACACTAGAAATTAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGTGACTTGCTCCTGATCACTTTTTACACTAGAAATTAGGAGC  150

seq1  CACTGAAGAAGGTAACTGTTTATCATCAATTAGGGTGTAAGTTTTTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGAAGGTAACTGTTTATCATCAATTAGGGTGTAAGTTTTTAACT  200

seq1  GAATAAAGGGAGAAAATGATTCATAAAGAATGACTACTTCATCCTACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAGGGAGAAAATGATTCATAAAGAATGACTACTTCATCCTACTAA  250

seq1  TATGCATGTCCTGTTTTACATATCAGTTACTATCAGGTCAATGATATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGTCCTGTTTTACATATCAGTTACTATCAGGTCAATGATATAAA  300

seq1  CCTCATGTACATAATGAAATTAAAATGAATACAAACATAACATTGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGTACATAATGAAATTAAAATGAATACAAACATAACATTGTGCTT  350

seq1  AGGATATCATAGAAGCTCAAAAATGTGAGTTATTTTAAATTTGTATCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATCATAGAAGCTCAAAAATGTGAGTTATTTTAAATTTGTATCTAT  400

seq1  CATATTTTATGAGACAATAGAAGTACATTTCGTTTTGCATACAGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTATGAGACAATAGAAGTACATTTCGTTTTGCATACAGTTTTTC  450

seq1  TGTTAAGGCATATCCCTTGGAATCACTGTTGATTTCTAGAGATTCTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGCATATCCCTTGGAATCACTGTTGATTTCTAGAGATTCTTGAG  500

seq1  GCACATAAGGGGGCCACAGGGAGCAGCAAGGCCAAGAAGTGGCTTGACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAGGGGGCCACAGGGAGCAGCAAGGCCAAGAAGTGGCTTGACGG  550

seq1  AAGTTTGGTTGAGAAGGTAGCCAAAATTAGTATAAACCCTAAGTCCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGTTGAGAAGGTAGCCAAAATTAGTATAAACCCTAAGTCCAGGG  600

seq1  GGAAAAGACAATGATAGTGTTACTCAGTGAGAAGTCACAGACCACATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGACAATGATAGTGTTACTCAGTGAGAAGTCACAGACCACATACA  650

seq1  TTAGTCTACTAGAGTGACACATAGCAGCCTTCTGGCTTCTCCTTTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTACTAGAGTGACACATAGCAGCCTTCTGGCTTCTCCTTTGCCTC  700

seq1  CTTGGCTTCCTCTTTGCCCTCTACTTCCAAGTGAAATGTAGTCTCTGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTCCTCTTTGCCCTCTACTTCCAAGTGAAATGTAGTCTCTGATG  750

seq1  GAAAAAAATTAATGGAAATAAAAAACTGTGAAATTTTTGTATTTATATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTAATGGAAATAAAAAACTGTGAAATTTTTGTATTTATATGT  800

seq1  TGAAATTATGACATTCTAAGTACTCGACT-AAAAAAAAAATCCCCCTGAA  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGAAATTATGACATTCTAAGTACTCGACTAAAAAAAAAAATCCCCCTGAA  850

seq1  AGTGCAATTCTTTAATGATTCCGTTCCTTTCTGGAACCAATTCCTTTTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAATTCTTTAATGATTCCGTTCCTTTCTGGAACCAATTCCTTTTAT  900

seq1  TGTACACAAAGTCCGTGTGCTCTCCAGGAAATCACAGAAAATCATTATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAAAGTCCGTGTGCTCTCCAGGAAATCACAGAAAATCATTATTC  950

seq1  AAGTGAATATTTGTAAGGCATA-TTTTGTAAGTACAAGAATATGAAACTA  998
      ||||| |||||||||| ||||| ||||||||||||||| ||||| |||||
seq2  AAGTG-ATATTTGTAA-GCATATTTTTGTAAGTACAAG-ATATG-AACTA  996

seq1  ATACAAATATTAGATGGTTATAATTTACTTCAAAATAAAAGTTAATGAGC  1048
      |||||||||||||||||||| |||||||||||||||||||||  ||||||
seq2  ATACAAATATTAGATGGTTA-AATTTACTTCAAAATAAAAGT--ATGAGC  1043

seq1  TTGGAAACATAATATT  1064
      |||||||||| |||||
seq2  TTGGAAACAT-ATATT  1058