BAC Information

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BAC

Clone NameB6Ng01-337D13
Chromosome1 (Build37)
Map Location 161,954,641 - 161,955,429
singlet/doubletsinglet
Overlap genenone
Upstream gene4930562F17Rik, EG240853, LOC664972, Rfwd2, EG620484, Tnr
Downstream gene4930523C07Rik, 4930562F07Rik, Tnn, Mrps14, Cacybp, Rabgap1l, Gpr52, EG620750, Rc3h1, Serpinc1, Zbtb37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337D13.bB6Ng01-337D13.g
ACCGA121912GA121913
length152797
definitionB6Ng01-337D13.b B6Ng01-337D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cctgcattcattggctggctagccagccaatcccagggctcctccggtct
ttgcctccccccccccccccccccaaagaagagttctgacaatataaaga
cgttaaactaaagcaaacattttttgtctccccactcacacattgttcgg
tc
gaattcagtacagtttcctttgctgggagatatcagtaagcaccatggag
cggctgcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtt
tgtgcacgcgcgcgcgtatatctatgtgtgtgtgtcatcaggcaaaaaac
acagctggaatgttctccactggagacccctagcttttgatgcaatcagt
gaagcactggcctaatattgtgagaatcaccctagagctgtggttttggt
aagaccccagatgtggtttaagccccagtggaacccatggggtagggagt
cagccagttggccacaggtgcaagaacacagtttcactgaaccaagcagc
agcacctagggaccaccttccccgagcagggacctcttgtgcatgtaagt
aaagggcaccccagggcagagtttaaaagctcctgtcagagagtaagaag
caggagtgagccttgcctttggcccactctcttgacttgaggtctccacg
cctcagcatcttcatccataaaaatcacactaacaatagactcaaataac
aagggttggcaagagggctattagataatacaaaacactgaggtgaaatg
cctggcgtacctccagcactgagcctcattggagcttgaatacaaaaagc
gaaaacctgcaataatgatccagtcttttctatacaggtcatcatttctt
ctgtggtgaatttttgtgccctgcttctgatcttttaaattgttgtatct
attttttatgcgtgtggatgtttgggctagtgagtctattcaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_161954641_161955429
seq2: B6Ng01-337D13.g_66_862

seq1  GAATTCAGTACAGTTTCCTTTGCTGGGAGATATCAGTAAGCACCATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACAGTTTCCTTTGCTGGGAGATATCAGTAAGCACCATGGAG  50

seq1  CGGCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT  100

seq1  TGTGCACGCGCGCGCGTATATCTATGTGTGTGTGTCATCAGGCAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACGCGCGCGCGTATATCTATGTGTGTGTGTCATCAGGCAAAAAAC  150

seq1  ACAGCTGGAATGTTCTCCACTGGAGACCCCTAGCTTTTGATGCAATCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGGAATGTTCTCCACTGGAGACCCCTAGCTTTTGATGCAATCAGT  200

seq1  GAAGCACTGGCCTAATATTGTGAGAATCACCCTAGAGCTGTGGTTTTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTGGCCTAATATTGTGAGAATCACCCTAGAGCTGTGGTTTTGGT  250

seq1  AAGACCCCAGATGTGGTTTAAGCCCCAGTGGAACCCATGGGGTAGGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCCAGATGTGGTTTAAGCCCCAGTGGAACCCATGGGGTAGGGAGT  300

seq1  CAGCCAGTTGGCCACAGGTGCAAGAACACAGTTTCACTGAACCAAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTTGGCCACAGGTGCAAGAACACAGTTTCACTGAACCAAGCAGC  350

seq1  AGCACCTAGGGACCACCTTCCCCGAGCAGGGACCTCTTGTGCATGTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTAGGGACCACCTTCCCCGAGCAGGGACCTCTTGTGCATGTAAGT  400

seq1  AAAGGGCACCCCAGGGCAGAGTTTAAAAGCTCCTGTCAGAGAGTAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCACCCCAGGGCAGAGTTTAAAAGCTCCTGTCAGAGAGTAAGAAG  450

seq1  CAGGAGTGAGCCTTGCCATTGGCCCACTCTCTTGACTTGAGGTCTCCACG  500
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAGGAGTGAGCCTTGCCTTTGGCCCACTCTCTTGACTTGAGGTCTCCACG  500

seq1  CCTCAGCATCTTCATCCATAAAAATCACACTAACAATAGACTCAAATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCATCTTCATCCATAAAAATCACACTAACAATAGACTCAAATAAC  550

seq1  AAGGGTTGGCAAGAGGGCTATTAGATAATACAAAACACTGAGGTGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGGCAAGAGGGCTATTAGATAATACAAAACACTGAGGTGAAATG  600

seq1  CCTGGCGTACCTCCAGCACCGAGCCTCACTGGAGCTTGAA-AC-AAAAGC  648
      ||||||||||||||||||| |||||||| ||||||||||| || ||||||
seq2  CCTGGCGTACCTCCAGCACTGAGCCTCATTGGAGCTTGAATACAAAAAGC  650

seq1  GAAAACCTGCAATAATGATCCAGTCTTTTCTTATACAGTTCATCATTTCT  698
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  GAAAACCTGCAATAATGATCCAGTCTTTTC-TATACAGGTCATCATTTCT  699

seq1  TCT-TTGTGAA-TTTTGTGCCCTGGTTCTGATCTTTTAAAT--GTGTATC  744
      ||| | ||||| |||||||||||| ||||||||||||||||   ||||||
seq2  TCTGTGGTGAATTTTTGTGCCCTGCTTCTGATCTTTTAAATTGTTGTATC  749

seq1  TA-TTTTTATGCGTGTGGATGTTT-GGCTTGTGAGTCTA-TCAATGCA  789
      || ||||||||||||||||||||| |||| ||||||||| ||||||||
seq2  TATTTTTTATGCGTGTGGATGTTTGGGCTAGTGAGTCTATTCAATGCA  797