BAC Information

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BAC

Clone NameB6Ng01-337D17
Chromosome1 (Build37)
Map Location 10,243,530 - 10,244,637
singlet/doubletsinglet
Overlap genenone
Upstream geneSntg1, EG620853, LOC665138, Rrs1, Adhfe1, LOC620542, 3110035E14Rik, Mybl1, Vcpip1, LOC100039536, LOC665173, Sgk3, EG620986, LOC100039643, 6030422M02Rik, LOC100039596, 4930418G15Rik, Cops5, Cspp1, Arfgef1
Downstream geneCpa6, LOC433271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337D17.bB6Ng01-337D17.g
ACCGA121920GA121921
length1,1401,099
definitionB6Ng01-337D17.b B6Ng01-337D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacaggttccaggcacgagctcaagtccgtcaccaataggctg
acaggtccggatcacgaggaacagtccagcctggcaggcagcctcactgc
acatgctcgggcaaggcagtaaacatcttggcccatggggcctcacccac
ttcccgcactggacagatgttatacaggcactaggagaacacaaatgcca
gcccagtctactatacccagcaaaactttcaattaccatagacagagaaa
ccatagtattccataacaaaaccaaattcacacaataaatttccacgaat
ccaaaccagaaaaaaaaaacaatacaaggatagaaactacaccctagaga
aagcaagaaagtaatcctacaacaaacctaaaagaagaccacaagaacag
aatgccatctctaacaacagaaataataggaaacaacaactacttttcct
tattatctcttaatatcaatggactcaattccccaataaaaagacataga
ctaacagactggctaaacaaacaggacccaacattttgctgcttacagga
aacccatctcagggaaaaaagacagacactacctcagagtgaaaggctgg
aaaacaaatttccaagcaaatggtctgaagaaacaagctggagtagccat
tctaatatcgaataaaatcaacttccaacccaaagttatcaaaaaagaca
aggaggggcacttcatactcatcaaaggtaaaatcttccaagaggaactc
tcaattctgaatatttatgctccaaatgcaagggcagcaactttcattaa
agaaactttagtaaagctcaaagcacacattgcacctcacacaatagtag
tgggagacgtcaacaccccaatttcatcaatggacagattgtggaaacag
aaactaaacagggacacagtgaactaacagaagttatgagacaaatgaat
ttaacacatatctatagacattttatcctaaacaaaggatataccatctt
ctcagcacacatgtaccttctcaaatgaacatatatggtcacaaaccagg
cctcaccgaatacaaaatgtgatgtcccatgcatcttatccgaatcacat
gtactagctgatcttcactaccacttaatatggaaagtca
gaattccaattgaagtactttggaggatgaagcaggagagtcttgagttt
aaagccagtggtcaacaatgagttcaaggccagggaagaaaacacagtga
aatccaacaacagaacagcacacacagcagaagtcaataagactctgtgg
ggggttgaatgagactggcccctcaaggctcatttgtttgaatgcttggt
tcctagttgggcggactctttggtaaggcttaggaagtgtgatattgttg
gaagaggtgtgtcactcgaggtggactctctctctctctctcttgtgctt
atagataagaatgtcagtgttcctttcctgacatgtcatgactgtcatgg
tctcaccctctaaaactataagcaagcccccaattgaatgctttattttg
taggttgccttggtcatggtgtctctctctgcacagaaatagaacagtga
caagacagacccacttgcttttccagtaatcaaataccttcagtgaaatt
tccttaactttcacatacatcagtgcctctttgaactctcctgggaagtc
ttcagaactgcctgtaaagcttcaactatgacgtgaatcaccattgcctc
atctgacaatgaccaacaggccaaaccagtctttcttctacctttctccc
catcccaaaacatgttttataaggaaagagcaaaggtgagttcgattgga
aggggaagaggtggtctctttttgcttggaagttaattatttccttctcc
ttcctctccagccatattatcagccaaccacatcttgaaatcctagagcc
atttcttccaggttcattactctgttccattaagcaacaggtgctattag
taaaaagcttaaaaaaaaataagggaaagtaatcaaaagcgtttcctagc
tcctgtcagagacacacctatgaactttccacattttatggcaaggtgga
aaattctaacctttttaaacctgtgatataataataataataaagcatgg
tagagaaaaaagctgagaagagctcactgctagtcacttctgtgtgcatg
ttcatttgacagctagccagtgatcgcttgtctttatagagcactgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_10243530_10244637
seq2: B6Ng01-337D17.g_67_1165

seq1  GAATTCCAATTGAAGTACTTTGGAGGATGAAGCAGGAGAGTCTTGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTGAAGTACTTTGGAGGATGAAGCAGGAGAGTCTTGAGTTT  50

seq1  AAAGCCAGTGGTCAACAATGAGTTCAAGGCCAGGGAAGAAAACACAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGTGGTCAACAATGAGTTCAAGGCCAGGGAAGAAAACACAGTGA  100

seq1  AATCCAACAACAGAACAGCACACACAGCAGAAGTCAATAAGACTCTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACAACAGAACAGCACACACAGCAGAAGTCAATAAGACTCTGTGG  150

seq1  GGGGTTGAATGAGACTGGCCCCTCAAGGCTCATTTGTTTGAATGCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGAATGAGACTGGCCCCTCAAGGCTCATTTGTTTGAATGCTTGGT  200

seq1  TCCTAGTTGGGCGGACTCTTTGGTAAGGCTTAGGAAGTGTGATATTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTGGGCGGACTCTTTGGTAAGGCTTAGGAAGTGTGATATTGTTG  250

seq1  GAAGAGGTGTGTCACTCGAGGTGGACTCTCTCTCTCTCTCTCTTGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTGTGTCACTCGAGGTGGACTCTCTCTCTCTCTCTCTTGTGCTT  300

seq1  ATAGATAAGAATGTCAGTGTTCCTTTCCTGACATGTCATGACTGTCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAAGAATGTCAGTGTTCCTTTCCTGACATGTCATGACTGTCATGG  350

seq1  TCTCACCCTCTAAAACTATAAGCAAGCCCCCAATTGAATGCTTTATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCCTCTAAAACTATAAGCAAGCCCCCAATTGAATGCTTTATTTTG  400

seq1  TAGGTTGCCTTGGTCATGGTGTCTCTCTCTGCACAGAAATAGAACAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGCCTTGGTCATGGTGTCTCTCTCTGCACAGAAATAGAACAGTGA  450

seq1  CAAGACAGACCCACTTGCTTTTCCAGTAATCAAATACCTTCAGTGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGACCCACTTGCTTTTCCAGTAATCAAATACCTTCAGTGAAATT  500

seq1  TCCTTAACTTTCACATACATCAGTGCCTCTTTGAACTCTCCTGGGAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAACTTTCACATACATCAGTGCCTCTTTGAACTCTCCTGGGAAGTC  550

seq1  TTCAGAACTGCCTGTAAAGCTTCAACTATGACGTGAATCACCATTGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACTGCCTGTAAAGCTTCAACTATGACGTGAATCACCATTGCCTC  600

seq1  ATCTGACAATGACCAACAGGCCAAACCAGTCTTTCTTCTACCTTTCTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACAATGACCAACAGGCCAAACCAGTCTTTCTTCTACCTTTCTCCC  650

seq1  CATCCCAAAACATGTTTTATAAGGAAAGAGCAAAGGTGAGTTCGATTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAAAACATGTTTTATAAGGAAAGAGCAAAGGTGAGTTCGATTGGA  700

seq1  AGGGGAAGAGGTGGTCTCTTTTTGCTTGGAAGTTAATTATTTCCTTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGGTGGTCTCTTTTTGCTTGGAAGTTAATTATTTCCTTCTCC  750

seq1  TTCCTCTCCAGCCATATTATCAGCCAACCACATCTTGAAATCCTAGAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCAGCCATATTATCAGCCAACCACATCTTGAAATCCTAGAGCC  800

seq1  ATTTCTTCCAGGTTCATTACTCTGTTCCATTAAGCAACAGGTGCTATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCCAGGTTCATTACTCTGTTCCATTAAGCAACAGGTGCTATTAG  850

seq1  TAAAAAGCTT-AAAAAAAATAAGGG-AAGTAATCAAAAGCG-TTCCTAGC  897
      |||||||||| |||||||||||||| ||||||||||||||| ||||||||
seq2  TAAAAAGCTTAAAAAAAAATAAGGGAAAGTAATCAAAAGCGTTTCCTAGC  900

seq1  TCCTGTCAGAGACACACCTATGAACTTTCCACATTTTATGGCAAGGTGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAGAGACACACCTATGAACTTTCCACATTTTATGGCAAGGTGGA  950

seq1  AAATTCTAACCTTTTTAAAACCTGTGATAATAATAATAATAATAAAAGCC  997
      |||||||||||||||| ||||||||||| |||||||||||||||||   |
seq2  AAATTCTAACCTTTTT-AAACCTGTGAT-ATAATAATAATAATAAA--GC  996

seq1  ATGGGTAGGAGAAAAAAAGCTGGAGAAGAGCTCACTGCTTAGTCACTTCC  1047
      || |||| ||| ||||||||| |||||||||||||||| ||||||||| |
seq2  AT-GGTA-GAG-AAAAAAGCT-GAGAAGAGCTCACTGC-TAGTCACTT-C  1040

seq1  TGTGTGCATGTTTCATTTGACAAGCTAG-CAGTGATCGC-TGTCTTTTAT  1095
      |||||||||| |||||||||| |||||| |||||||||| |||| |||||
seq2  TGTGTGCATG-TTCATTTGAC-AGCTAGCCAGTGATCGCTTGTC-TTTAT  1087

seq1  AGAGCACTTGTAC  1108
      ||||||| |||||
seq2  AGAGCAC-TGTAC  1099