BAC Information

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BAC

Clone NameB6Ng01-337D22
Chromosome1 (Build37)
Map Location 122,148,714 - 122,253,523
singlet/doubletdoublet
Overlap geneSteap3, C1ql2
Upstream geneLOC100041778, Inhbb, Ralb, Tmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik
Downstream geneMarco, En1, AI848258, Insig2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337D22.bB6Ng01-337D22.g
ACCGA121930GA121931
length363291
definitionB6Ng01-337D22.b B6Ng01-337D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,148,714 - 122,149,076)(122,253,238 - 122,253,523)
sequence
ttttcttcttgacagtatcagtaccgatactgtcaacttttggcaggacc
tagaatcatttaggagacaaacttctggatacgtggaagggagtttctag
attagactgaagtaggatgacctaccctaaatgtgaagggccaggcgcat
gggctaggcctggaatcaattaaaagaagaaaatggagtatgcaccagca
tctgtttcacactcctgctgccgtgacttcccccaccatgatgacctgca
ccctcagactgtgagccagcacaagccctccctccctgaagctgcttccc
ttaggggtttgagcaaggtcactgataatgattcatagcaggagtgagga
gaggggggtggag
cagccccagattgggggtgtgtggggggactcaagtgtaaactatacatt
gggtcacagggctaagcgcatggctcttagcctcgggtattagactatga
ctccctcctatcaagactgatactgtgtgtggtggtgctggcctgtctgg
agcacttggctatataacaagaggccagcctggaatacatgaaatcctgt
ctcgaaagcagtgtaagcattgatataattgatctttctgttccttgatg
tcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_122148714_122149076
seq2: B6Ng01-337D22.b_53_415

seq1  TTTTCTTCTTGACAGTATCAGTACCGATACTGTCAACTTTTGGCAGGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTGACAGTATCAGTACCGATACTGTCAACTTTTGGCAGGACC  50

seq1  TAGAATCATTTAGGAGACAAACTTCTGGATACGTGGAAGGGAGTTTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCATTTAGGAGACAAACTTCTGGATACGTGGAAGGGAGTTTCTAG  100

seq1  ATTAGACTGAAGTAGGATGACCTACCCTAAATGTGAAGGGCCAGGCGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTGAAGTAGGATGACCTACCCTAAATGTGAAGGGCCAGGCGCAT  150

seq1  GGGCTAGGCCTGGAATCAATTAAAAGAAGAAAATGGAGTATGCACCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGGCCTGGAATCAATTAAAAGAAGAAAATGGAGTATGCACCAGCA  200

seq1  TCTGTTTCACACTCCTGCTGCCGTGACTTCCCCCACCATGATGACCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCACACTCCTGCTGCCGTGACTTCCCCCACCATGATGACCTGCA  250

seq1  CCCTCAGACTGTGAGCCAGCACAAGCCCTCCCTCCCTGAAGCTGCTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGACTGTGAGCCAGCACAAGCCCTCCCTCCCTGAAGCTGCTTCCC  300

seq1  TTAGGGGTTTGAGCAAGGTCACTGATAATGATTCATAGCAGGAGTGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGGTTTGAGCAAGGTCACTGATAATGATTCATAGCAGGAGTGAGGA  350

seq1  GAGGGGGGTGGAG  363
      |||||||||||||
seq2  GAGGGGGGTGGAG  363

seq1: chr1_122253238_122253523
seq2: B6Ng01-337D22.g_70_355 (reverse)

seq1  ACACACACACACACACACACACACACACACACACGACATCAAGGAACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACGACATCAAGGAACAGA  50

seq1  AAGATCAATTATATCAATGCTTACACTGCTTTCGAGACAGGATTTCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAATTATATCAATGCTTACACTGCTTTCGAGACAGGATTTCATGT  100

seq1  ATTCCAGGCTGGCCTCTTGTTATATAGCCAAGTGCTCCAGACAGGCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGCTGGCCTCTTGTTATATAGCCAAGTGCTCCAGACAGGCCAGC  150

seq1  ACCACCACACACAGTATCAGTCTTGATAGGAGGGAGTCATAGTCTAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACACACAGTATCAGTCTTGATAGGAGGGAGTCATAGTCTAATAC  200

seq1  CCGAGGCTAAGAGCCATGCGCTTAGCCCTGTGACCCAATGTATAGTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGCTAAGAGCCATGCGCTTAGCCCTGTGACCCAATGTATAGTTTAC  250

seq1  ACTTGAGTCCCCCCACACACCCCCAATCTGGGGCTG  286
      ||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTCCCCCCACACACCCCCAATCTGGGGCTG  286