BAC Information

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BAC

Clone NameB6Ng01-337E06
Chromosome1 (Build37)
Map Location 29,196,981 - 29,198,158
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665903, Gm597, LOC435614, EG623924
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337E06.bB6Ng01-337E06.g
ACCGA121944GA121945
length8691,191
definitionB6Ng01-337E06.b B6Ng01-337E06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagtacctctatataccattttttaaattgggttatttgatt
tttttgagtctcccagatgtcattcccctggagaatggatatagaaagta
tggttcatttaaacaatggaatacatttcaggtattaaaaacaaggacat
catgaattttgcaagcaaattgatggaactagaaaaatatcatcctgagt
gaataacttagaccccaaagaacatgggtaatatgaactcactgataagt
tcatattagccaaaaagtaaagaatacacatgatacaccccacagaccaa
aagaaggcaaataagaaggaagacccaagtgaggatgcttgaaccccact
tacaaaggggaaaaaatagtcatgggaagcagaaaaaaggagggacctgg
gtgggaaaggggtcagagagaggaataggaggattagatgatgtatggga
agagatagaagagaggccaggcaaatgaatggaaatatgcagctcccaga
gatggggtgtgggggtaatctctagatactccctgagtcctgggatgggg
gaggcttccaggagtcaatatggctgaccatagccaaaatgtccaataat
tgatatagaacccgaagagatcacctccagtagccaaacagcacccccag
tggaaagaagggggaaaaccaggccacctacaaaactttcaacctaaaaa
ttggctccatgttaaacaaatgtagggacaaaatgggagcgagcctgaag
gaatatcagaccagagactggtctaaattgaagatccatcccatgggcta
ggcaccaaatctgactctattaataatgctatgttgtgcttgaacatagc
aagctctagcatggctgta

gaattcatatgggcttatttttgtcatgaagaaagtgtggagaagagaag
acaatctgttagaatcaattctcttcttccaacatttttttaaccttctt
ccctattatttaatctttaagattggaaagcattttattcttaaggtaga
tcacattacttatatattgcttgaataaccttatacatcgctttaatgta
gcatatgtatatatatatatatatatatatatatacacatatgtgtgtgt
acatttatatatatatatacatatatatatataagttaatatatacttaa
tttttatttttatgtttcatttaatacaatacgaatgttttaatgatttg
tcgaagttttcaattgtcatgtagcagtttcttttagaaagtcttggtga
ctaatttagtgttttcttattctattattttttcatcaatagagtaaccc
ttgaatttagatttgtgtgttcataattattacttttgtctcaaatcatg
catgtgcatatagaatgttaacttactatagtttttctctaaattacatc
tgagcctctacagactacaaggtgagttaatatccattcttcctggacag
atgatgggaagctagacacttacttggtagaactctgtagtatcaaggtg
aatctgtctcttctctgggtatttactataacatgaaagcaaggaagaaa
acacatcactctcatattgtctaactattctgccatttttaggcctccca
ttactacacatgtgagcatttctctaatctccaaaatgcaactcaaagag
aagggtcatacttgattttactactctgattgctgaagaatttcctttct
aaacaaatatgcttaaatgaagcattattccttgatgctgcatgtgacat
gccttgctattaatttacttcttcttagaagtaattatagagtagaagag
tacatgtaaagtatcttgctcctttatttaattaatcgaattctaaaatc
tctaacaatcctattattatcaattgttaggcaaataatattctcattca
agaatttattttaagaagtattttgccttaaaactctatggagtaattca
aaaccttcattgataatatgtaagaaaaaaatattcggaagtcttaacca
atccattcctattcttttaatgatattttcctttaattaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29196981_29198158
seq2: B6Ng01-337E06.g_65_1255

seq1  GAATTCATATGGGCTTATTTTTGTCATGAAGAAAGTGTGGAGAAGAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGGCTTATTTTTGTCATGAAGAAAGTGTGGAGAAGAGAAG  50

seq1  ACAATCTGTTAGAATCAATTCTCTTCTTCCAACATTTTTTTAACCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGTTAGAATCAATTCTCTTCTTCCAACATTTTTTTAACCTTCTT  100

seq1  CCCTATTATTTAATCTTTAAGATTGGAAAGCATTTTATTCTTAAGGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTATTTAATCTTTAAGATTGGAAAGCATTTTATTCTTAAGGTAGA  150

seq1  TCACATTACTTATATATTGCTTGAATAACCTTATACATCGCTTTAATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTACTTATATATTGCTTGAATAACCTTATACATCGCTTTAATGTA  200

seq1  GCATATGTATATATATATATATATATATATATATACACATATGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTATATATATATATATATATATATATATACACATATGTGTGTGT  250

seq1  ACATTTATATATATATATACATATATATATATAAGTTAATATATACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATATATATATATACATATATATATATAAGTTAATATATACTTAA  300

seq1  TTTTTATTTTTATGTTTCATTTAATACAATACGAATGTTTTAATGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTTTATGTTTCATTTAATACAATACGAATGTTTTAATGATTTG  350

seq1  TCGAAGTTTTCAATTGTCATGTAGCAGTTTCTTTTAGAAAGTCTTGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGTTTTCAATTGTCATGTAGCAGTTTCTTTTAGAAAGTCTTGGTGA  400

seq1  CTAATTTAGTGTTTTCTTATTCTATTATTTTTTCATCAATAGAGTAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAGTGTTTTCTTATTCTATTATTTTTTCATCAATAGAGTAACCC  450

seq1  TTGAATTTAGATTTGTGTGTTCATAATTATTACTTTTGTCTCAAATCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTAGATTTGTGTGTTCATAATTATTACTTTTGTCTCAAATCATG  500

seq1  CATGTGCATATAGAATGTTAACTTACTATAGTTTTTCTCTAAATTACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATATAGAATGTTAACTTACTATAGTTTTTCTCTAAATTACATC  550

seq1  TGAGCCTCTACAGACTACAAGGTGAGTTAATATCCATTCTTCCTGGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTCTACAGACTACAAGGTGAGTTAATATCCATTCTTCCTGGACAG  600

seq1  ATGATGGGAAGCTAGACACTTACTTGGTAGAACTCTGTAGTATCAAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGAAGCTAGACACTTACTTGGTAGAACTCTGTAGTATCAAGGTG  650

seq1  AATCTGTCTCTTCTCTGGGTATTTACTATAACATGAAAGCAAGGAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTCTCTTCTCTGGGTATTTACTATAACATGAAAGCAAGGAAGAAA  700

seq1  ACACATCACTCTCATATTGTCTAACTATTCTGCCATTTTTAGGCCTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCACTCTCATATTGTCTAACTATTCTGCCATTTTTAGGCCTCCCA  750

seq1  TTACTACACATGTGAGCATTTCTCTAATCTCCAAAATGCAACTCAAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACACATGTGAGCATTTCTCTAATCTCCAAAATGCAACTCAAAGAG  800

seq1  AAGGGTCATACTTGATTTTACTACTCTGATTGCTGAAGAATTTCCTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCATACTTGATTTTACTACTCTGATTGCTGAAGAATTTCCTTTCT  850

seq1  AAACAAATATGCTTAAATGAAGCATTATTCCTTGATGCTGCATGTGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATATGCTTAAATGAAGCATTATTCCTTGATGCTGCATGTGACAT  900

seq1  GCCTTGCTATTAATTTACTTCTTCTTAGAAGTAATTATAGAGTAGAAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTATTAATTTACTTCTTCTTAGAAGTAATTATAGAGTAGAAGAG  950

seq1  TACATGTAAAGTATCTTTGCTCCTTTATTTAATTAATCGAATTCTAAAAT  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TACATGTAAAGTATC-TTGCTCCTTTATTTAATTAATCGAATTCTAAAAT  999

seq1  CTCTAACAATCCTA-TATTATCAATTGTTAGGCAAATAATATTCTCATTC  1049
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCTAACAATCCTATTATTATCAATTGTTAGGCAAATAATATTCTCATTC  1049

seq1  -AGA--TTA-TTTAAG-AGTA-TTTGCCTAAAACTTCTATGGAGTATTTC  1093
       |||  ||| |||||| |||| ||||||| |||  ||||||||||| |||
seq2  AAGAATTTATTTTAAGAAGTATTTTGCCTTAAAACTCTATGGAGTAATTC  1099

seq1  -AAACCCTCATTGAT-ATATGTTAGAAAAATAT----CGAAGTC-TACAC  1136
       ||||| |||||||| |||||| ||||||| ||     |||||| ||  |
seq2  AAAACCTTCATTGATAATATGTAAGAAAAAAATATTCGGAAGTCTTAACC  1149

seq1  AATCTATTCTTATTTTTTTATTGGATATTTT-CTTTATTTACA  1178
      |||| |||| |||| ||||| | |||||||| ||||| |||||
seq2  AATCCATTCCTATTCTTTTAAT-GATATTTTCCTTTAATTACA  1191


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