MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-338A06
Chromosome	1 (Build37)
Map Location	17,080,983 - 17,179,132
singlet/doublet	doublet
Overlap gene	Jph1, Gdap1
Upstream gene	4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306
Downstream gene	LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15, Crispld1, LOC665564, LOC100040126, Crisp4
Link	Open Mouse BAC browser

Click to get alignment info.

name	4930444P10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75799 MGI:1923049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Rpl7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19989 MGI:98073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rdh10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98711 MGI:1924238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665282 MGI:3649156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Stau2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29819 MGI:1352508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2w (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66799 MGI:1914049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tceb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67923 MGI:1915173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665480 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Tmem70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ly96 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17087 MGI:1341909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC665496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG545306 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins

name	Jph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57339 MGI:1891495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14545 MGI:1338002
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Rbm6-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108212 MGI:1889580
definition	note : RNA binding motif protein 6, pseudogene 1 pseudo : _no_value

name	Ppia-ps1_125.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606716
definition	note : peptidylprolyl isomerase A pseudogene 1_125.1 pseudo : _no_value

name	Pi15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94227 MGI:1934659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crispld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Crisp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930444P10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362781 GeneID:75799 MGI:1923049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : RIKEN cDNA 4930444P10 gene transcript_id : XM_976954.1

name	Rpl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360411 GeneID:19989 MGI:98073
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L7 transcript_id : NM_011291.3

name	Rdh10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893004 GeneID:98711 MGI:1924238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinol dehydrogenase 10 (all-trans) transcript_id : NM_133832.3

name	EG665282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94362732 GeneID:665282 MGI:3649156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665282 transcript_id : XM_977441.1

name	Stau2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379809 GeneID:29819 MGI:1352508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : staufen (RNA binding protein) homolog 2 (Drosophila) transcript_id : NM_025303.2

name	Ube2w (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802798 GeneID:66799 MGI:1914049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2W (putative) transcript_id : NM_025773.2

name	Tceb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364329 GeneID:67923 MGI:1915173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription elongation factor B (SIII), polypeptide 1 transcript_id : NM_026456.3

name	Tmem70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647264 GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 70 transcript_id : NM_026392.1

name	Tmem70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647262 GeneID:70397 MGI:1915068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 70 transcript_id : NM_027415.2

name	Ly96 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393736 GeneID:17087 MGI:1341909
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphocyte antigen 96 transcript_id : NM_016923.1

name	EG545306 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233619 GeneID:545306 MGI:3644176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 108 ESTs, 14 Proteins product : predicted gene, EG545306 transcript_id : XM_619609.4

name	Jph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10181139 GeneID:57339 MGI:1891495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junctophilin 1 transcript_id : NM_020604.1

name	Gdap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981767 GeneID:14545 MGI:1338002
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ganglioside-induced differentiation-associated-protein 1 transcript_id : NM_010267.2

name	Pi15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716490 GeneID:94227 MGI:1934659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidase inhibitor 15 transcript_id : NM_053191.1

name	Crispld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173745 GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein LCCL domain containing 1 transcript_id : NM_031402.2

name	Crisp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88595370 GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 4 transcript_id : NM_030033.1

name	4930444P10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362782 GeneID:75799 MGI:1923049
definition	codon_start : 1 product : hypothetical protein LOC75799 protein_id : XP_982048.1

name	Rpl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981515 CCDS:CCDS14829.1 GeneID:19989 MGI:98073
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0015934 - large ribosomal subunit [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L7 protein_id : NP_035421.2

name	Rdh10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25141231 CCDS:CCDS14830.1 GeneID:98711 MGI:1924238
definition	GO_component : GO:0005792 - microsome [Evidence ISS] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004745 - retinol dehydrogenase activity [Evidence ISS] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0007601 - visual perception [Evidence ISS] codon_start : 1 product : retinol dehydrogenase 10 protein_id : NP_598593.1

name	EG665282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94362733 GeneID:665282 MGI:3649156
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982535.1

name	Stau2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384662 CCDS:CCDS14831.1 GeneID:29819 MGI:1352508
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : staufen (RNA binding protein) homolog 2 protein_id : NP_079579.1

name	Ube2w (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625675 GeneID:66799 MGI:1914049
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] codon_start : 1 product : ubiquitin-conjugating enzyme E2W (putative) protein_id : NP_080049.1

name	Tceb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312712 GeneID:67923 MGI:1915173
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : elongin C product : transcription elongation factor B (SIII), polypeptide 1 protein_id : NP_080732.1

name	Tmem70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647265 GeneID:70397 MGI:1915068
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC70397 isoform 2 protein_id : NP_080668.1

name	Tmem70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647263 GeneID:70397 MGI:1915068
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC70397 isoform 1 protein_id : NP_081691.2

name	Ly96 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393737 CCDS:CCDS14832.1 GeneID:17087 MGI:1341909
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 product : lymphocyte antigen 96 protein_id : NP_058619.1

name	EG545306 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233620 GeneID:545306 MGI:3644176
definition	codon_start : 1 product : similar to mKIAA0737 protein protein_id : XP_619609.4

name	Jph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181140 CCDS:CCDS14833.1 GeneID:57339 MGI:1891495
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0016529 - sarcoplasmic reticulum [Evidence TAS]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0008307 - structural constituent of muscle [Evidence IMP] GO_process : GO:0007517 - muscle development [Evidence IMP] codon_start : 1 note : junctophilin type 1; mitsugumin72 product : junctophilin 1 protein_id : NP_065629.1

name	Gdap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753964 CCDS:CCDS14834.1 GeneID:14545 MGI:1338002
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : ganglioside-induced differentiation-associated-protein 1 protein_id : NP_034397.1

name	Pi15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716491 GeneID:94227 MGI:1934659
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : cysteine-rich secreted protein product : protease inhibitor 15 protein_id : NP_444421.1

name	Crispld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173746 GeneID:83691 MGI:1934666
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : LCCL domain containing cysteine-rich secretory protein 1 product : cysteine-rich secretory protein LCCL domain containing 1 protein_id : NP_113579.2

name	Crisp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88595371 CCDS:CCDS14835.1 GeneID:78081 MGI:1925331
definition	codon_start : 1 product : cysteine-rich secretory protein 4 protein_id : NP_084309.1

name	LOC665480 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665480
definition	number : 1 pseudo : _no_value

name	LOC100040056 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040056
definition	number : 1 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 2 pseudo : _no_value

name	LOC665496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665496
definition	number : 1 pseudo : _no_value

name	LOC665564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665564
definition	number : 1 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 5 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 4 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 3 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 2 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:165066
definition	standard_name : AI875664

name	(CDS detail)
type	STS
link
xref	UniSTS:210311
definition	standard_name : RH136320

name	(CDS detail)
type	STS
link
xref	UniSTS:167295
definition	standard_name : D1Ertd762e

name	(CDS detail)
type	STS
link
xref	UniSTS:128452
definition	standard_name : D1Mit119

name	(CDS detail)
type	STS
link
xref	UniSTS:207129
definition	standard_name : BB541252

name	(CDS detail)
type	STS
link
xref	UniSTS:165067
definition	standard_name : AI987979

name	(CDS detail)
type	STS
link
xref	UniSTS:161398
definition	standard_name : RH124576

name	(CDS detail)
type	STS
link
xref	UniSTS:207130
definition	standard_name : RH126878

name	(CDS detail)
type	STS
link
xref	UniSTS:128505
definition	standard_name : D1Mit168

name	(CDS detail)
type	STS
link
xref	UniSTS:21341
definition	standard_name : WI-18724

name	(CDS detail)
type	STS
link
xref	UniSTS:207131
definition	standard_name : BE136390

name	LOC383495 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233627 GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : hypothetical LOC383495 pseudo : _no_value transcript_id : XR_031682.1

clone name	MSMg01-060G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271O19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-337E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-308H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-338A06.b	B6Ng01-338A06.g
ACC	GA122453	GA122454
length	1,099	970
definition	B6Ng01-338A06.b	B6Ng01-338A06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(17,080,983 - 17,082,088)	(17,178,271 - 17,179,132)
sequence	gaattcttatttcataaattagaataatcttattggacagttgtaaatat gttcaacttaatatcgttataaagatatatcatttgtattgtagatatgt ttgtacataaagggatattttctttttatacacacagagcagtgagtatt tcagaggccccttttaaaataggttgttaaatattagggacataatttag aagaagaaaggtgccccatgtgccttaagcagtttttgaaaatggtttct cttggagtcttcttcccctctacccccaagtgtactgggaacctactcgg tgatgccatcagacaaaaactgcagtgttttgttttgtttaaaaaaaaaa attcatccctactttatgtcaaactaccagctctatatttacataccttg agtttgctatttccactttggttctggccatggctgccgccctttgtgca ccttcaattgctctatccaccttctctctagtttttgtatttcttattgg tataagctgcttccttatcccacggaccaggatattatttttgtattttc cctcttctttggagccatcaggaaacacagtgcagccgtacccatgcctc ttgttattggcccactcgccttcgtacttcatgccattggagcgttcgct gatgccgaagccattgcgcttatcgttcttccactcgcccatgtaggttt ccgtggtagtggcatccacgtgatcttccacggggcaaaaatcacagtcg acgtcaccaaagctgatggtggagttggcatcgctagaactgattctgct catggctgcatcactgcggaccgagctgcgcttgctggagatggaagact tggattcggacttgcggagtttcatgctgccgagaagggaaccccgacgg aagaggccgcccttcttcttgcccagttccgtgtccgcatggaagttgag cacgaagccacctcttgttccagccgggctgtctgcagctgcgctgcagc ttcatgcagcacgctgccgttgctctgctcactgcgcagcgaggcaggaa gtgcgcagcggggacgatcactgtggccatgcatagggacactctggcg	gaattccctatgcatgcagcttacctggagttctggcaactggcatgacc tctggtcctgtctccactcaagctggggagttacgggctgggacacagca actggatggggaaggaagaaagatcaatgggggtaggattgagtctatga ggactgaaccaaggaaatggaagagttctacaggcatacctgttcttctg actgttcttcttcttctgacaggaatcccccacttggttcttaatgcacg caaagtgtttggacctcacacatagtcgagaacttttgtttgtttgatgt ttatttaaaagaattctaaattatatacttaagagaatccaccagatgta actcagtttttgaaagatagttgttttaaagtcattgtttccaaattgtg aatggaaacacttatgtttataactcaaggaaaaatattagaattcctag aaatgttcaagatttctcaaaattatatgatattcttaaaatatctctgg catctttctatccttattcattacatgtaaatgcttaatcaacagtatat atcaatgtgttggtggtttataaaatatagcaaatgtttaaatgctagaa attctgtcaaatatcattgaatattattctaatactatccaatattgcct ggcaagactaaaagcactacacagaattatcagtaaaaattgccaatttg aggactggttttactttcaagccatggtatttgttagaaccatagtcata ggacttgtatgaaggataatatgttctgctttgttttggccttttggtgc agtaatggttaattagtgataataacccccccccatttccaatagaaagc cacacagacatcttcaagatgagaccaaaagacctgcctccctgactcct aagctcagagctgcccttatgcatgtgatccgatctagcatccccaaact gtcctgaacatatatcagtg
quality values	Open. Hide. 46 35 27 37 62 62 62 62 56 47 62 62 37 24 62 62 62 62 62 62 59 59 62 59 62 62 62 43 41 29 25 27 34 36 43 28 49 59 54 62 62 62 62 62 62 62 62 54 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 54 54 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 42 49 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 58 58 54 58 49 48 58 54 58 58 58 49 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 54 52 58 58 58 54 58 58 58 58 52 58 54 58 58 54 58 58 58 54 58 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 58 58 53 58 52 47 58 58 58 50 58 58 52 58 58 58 53 58 58 58 54 51 49 51 51 50 58 58 53 52 58 58 51 42 32 58 58 58 58 58 52 58 51 50 46 44 50 51 58 58 54 36 51 46 58 52 58 58 32 53 58 39 51 54 58 52 53 58 58 58 50 51 50 51 46 49 53 52 49 46 37 29 54 58 53 53 47 58 49 50 52 58 52 50 50 51 40 58 50 50 58 47 42 58 54 32 53 39 52 58 37 41 42 53 49 33 34 41 51 47 51 39 35 50 51 51 39 52 30 44 50 49 49 46 27 35 54 54 54 49 39 53 40 49 42 42 42 52 37 39 24 42 40 39 31 49 52 38 54 42 29 52 45 43 53 30 54 51 28 54 38 53 23 52 37 47 39 24 31 45 37 33 45 47 33 29 53 52 32 45 45 37 30 40 39 42 37 25 32 40 35 30 51 51 32 45 36 34 31 52 35 32 32 32 34 39 33 32 31 13 40 31 42 23 34 45 30 32 32 33 21 24 35 33 43 31 40 32 17 33 20 31 31 38 36 18 36 12 28 31 34 31 19 13 31 23 6 31 22 19 31 31 31 31 31 31 31 18 32 47 31 33 24 31 31 32 42 38 28 37 26 33 10 42 33 15 47 21 25 30 16 40 40 40 21 32 16 22 23 30 35 32 41 22 36 22 16 20 24 26 15 13 19 31 30 31 31 21 32 31 18 31 22 21 23 33 25 16 31 27 23 31 32 25 33 16 30 24 33 33 38 23 34 18 26 27 21 42 19 31 27 31 19 38 32 27 33 16 24 22 25 14 17 19 13 38 11 23 23 25 34 21 21 18 25 44 24 20 32 32 23 31 27 28 21 23 24 32 31 22 6 4 7 20 31 23 18 17 31 25 23 20 21 25 25 24 26 27 27 31 17 21 31 34 17 19 21 13 25 18 22 27 15 18 18 20 24 28 20 18 8 13 13 16 20 24 27 12 13 8 9 10 18 27 6 7 13 10 20 20 24 26 16 16 20 15 5 4 8 34 40 8 3 6 11 5 11 7 7 6 11 20 7 5 16 6 10 20 15 7 22 6 12 7 17 24 7 2 3 10 9 20 10 10 15 22 6 5	Open. Hide. 49 44 51 47 62 62 59 43 43 28 28 32 23 27 24 34 43 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 54 42 42 49 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 54 54 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 54 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 54 58 54 42 58 51 54 52 54 58 58 58 53 58 53 58 54 54 58 58 58 48 58 41 49 47 51 58 58 58 58 50 54 58 50 58 58 51 41 58 58 58 51 51 51 50 58 58 53 51 51 48 50 51 58 58 58 52 53 52 47 49 54 37 58 58 53 50 58 53 53 53 51 51 51 58 28 39 58 53 53 40 58 58 50 49 51 58 54 50 51 47 52 58 34 51 39 58 58 58 53 53 42 47 54 52 53 42 53 53 41 58 50 32 53 52 40 49 37 41 50 54 58 58 49 23 40 58 51 29 31 40 50 35 54 51 50 46 30 38 41 19 52 54 53 31 54 54 42 37 34 50 49 40 37 29 39 41 38 44 35 52 51 54 33 38 25 36 33 49 32 32 37 31 54 40 25 42 36 52 40 43 53 45 39 45 45 28 51 46 23 35 41 47 33 29 33 33 37 33 21 37 40 23 30 35 37 31 32 42 31 31 52 45 53 37 53 49 36 41 25 49 49 46 47 27 22 53 40 52 49 32 33 53 31 34 29 40 33 34 40 45 32 42 47 31 24 23 41 18 32 32 34 31 31 31 28 26 41 31 29 22 26 46 46 46 46 41 51 41 32 28 31 47 31 34 31 26 36 31 30 23 42 47 30 31 30 30 31 38 30 27 31 31 32 30 20 37 36 31 22 24 6 31 28 37 18 29 42 22 32 17 34 30 46 46 37 28 37 18 26 31 32 30 30 31 20 46 16 23 32 42 24 30 19 29 28 26 32 23 25 31 25 31 16 39 10 24 30 28 25 46 29 19 22 20 24 36 31 28 32 36 27 29 29 27 20 25 23 19 21 29 30 32 24 31 22 31 32 44 41 28 21 48 26 21 32 31 24 20 20 20 32 35 36 26 18 19 24 34 21 32 24 32 19 32 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_17080983_17082088
seq2: B6Ng01-338A06.b_44_1142

seq1  GAATTCTTATTTCATAAATTAGAATAATCTTATTGGACAGTTGTAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTCATAAATTAGAATAATCTTATTGGACAGTTGTAAATAT  50

seq1  GTTCAACTTAATATCGTTATAAAGATATATCATTTGTATTGTAGATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACTTAATATCGTTATAAAGATATATCATTTGTATTGTAGATATGT  100

seq1  TTGTACATAAAGGGATATTTTCTTTTTATACACACAGAGCAGTGAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACATAAAGGGATATTTTCTTTTTATACACACAGAGCAGTGAGTATT  150

seq1  TCAGAGGCCCCTTTTAAAATAGGTTGTTAAATATTAGGGACATAATTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCCCCTTTTAAAATAGGTTGTTAAATATTAGGGACATAATTTAG  200

seq1  AAGAAGAAAGGTGCCCCATGTGCCTTAAGCAGTTTTTGAAAATGGTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAGGTGCCCCATGTGCCTTAAGCAGTTTTTGAAAATGGTTTCT  250

seq1  CTTGGAGTCTTCTTCCCCTCTACCCCCAAGTGTACTGGGAACCTACTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTCTTCTTCCCCTCTACCCCCAAGTGTACTGGGAACCTACTCGG  300

seq1  TGATGCCATCAGACAAAAACTGCAGTGTTTTGTTTTGTTTAAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCATCAGACAAAAACTGCAGTGTTTTGTTTTGTTTAAAAAAAAAA  350

seq1  ATTCATCCCTACTTTATGTCAAACTACCAGCTCTATATTTACATACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCCTACTTTATGTCAAACTACCAGCTCTATATTTACATACCTTG  400

seq1  AGTTTGCTATTTCCACTTTGGTTCTGGCCATGGCTGCCGCCCTTTGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCTATTTCCACTTTGGTTCTGGCCATGGCTGCCGCCCTTTGTGCA  450

seq1  CCTTCAATTGCTCTATCCACCTTCTCTCTAGTTTTTGTATTTCTTATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATTGCTCTATCCACCTTCTCTCTAGTTTTTGTATTTCTTATTGG  500

seq1  TATAAGCTGCTTCCTTATCCCACGGACCAGGATATTATTTTTGTATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTGCTTCCTTATCCCACGGACCAGGATATTATTTTTGTATTTTC  550

seq1  CCTCTTCTTTGGAGCCATCAGGAAACACAGTGCAGCCGTACCCATGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTTGGAGCCATCAGGAAACACAGTGCAGCCGTACCCATGCCTC  600

seq1  TTGTTATTGGCCCACTCGCCTTCGTACTTCATGCCATTGGAGCGTTCGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTGGCCCACTCGCCTTCGTACTTCATGCCATTGGAGCGTTCGCT  650

seq1  GATGCCGAAGCCATTGCGCTTATCGTTCTTCCACTCGCCCATGTAGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCGAAGCCATTGCGCTTATCGTTCTTCCACTCGCCCATGTAGGTTT  700

seq1  CCGTGGTAGTGGCATCCACGTGATCTTCCACGGGGCAAAAATCACAGTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGTAGTGGCATCCACGTGATCTTCCACGGGGCAAAAATCACAGTCG  750

seq1  ACGTCACCAAAGCTGATGGTGGAGTTGGCATCGCTAGAACTGATTCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCACCAAAGCTGATGGTGGAGTTGGCATCGCTAGAACTGATTCTGCT  800

seq1  CATGGCTGCATCACTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGCATCACTGCGGACCGAGCTGCGCTTGCTGGAGATGGAAGACT  850

seq1  TGGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAAGGGAACCCCGACGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCGGACTTGCGGAGTTTCATGCTGCCGAGAAGGGAACCCCGACGG  900

seq1  AAGAGGCCGCCCTTCTTCTTGCCCAGTTCCGTGTCCGCATGGAAGTTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCCGCCCTTCTTCTTGCCCAGTTCCGTGTCCGCATGGAAGTTGAG  950

seq1  CACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCTGCGGCTGCAG  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACGAAGCCACCTCTTGTTCCAGCCGGGCTGTCTGCAGCTGC-GCTGCAG  999

seq1  CTTCATGCAGCACGCTGCCGTTGCTCTGCTCACTGCGCAGCGAGGCCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  CTTCATGCAGCACGCTGCCGTTGCTCTGCTCACTGCGCAGCGAGGC--AG  1047

seq1  GAAGTGCGCAGCGGGGAACGGATCACTGTGGCCATGCCATAGGGCACACT  1100
      |||||||||||||||||   |||||||||||||||| ||||||| |||||
seq2  GAAGTGCGCAGCGGGGA--CGATCACTGTGGCCATG-CATAGGG-ACACT  1093

seq1  CTGGCG  1106
      ||||||
seq2  CTGGCG  1099

seq1: chr1_17178271_17179132
seq2: B6Ng01-338A06.g_68_929 (reverse)

seq1  GATGTCTGTGTGGCTTTCTATTGGAAATGGGGGGGGGTTATTATCACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGTGTGGCTTTCTATTGGAAATGGGGGGGGGTTATTATCACTAA  50

seq1  TTAACCATTACTGCACCAAAAGGCCAAAACAAAGCAGAACATATTATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCATTACTGCACCAAAAGGCCAAAACAAAGCAGAACATATTATCCT  100

seq1  TCATACAAGTCCTATGACTATGGTTCTAACAAATACCATGGCTTGAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAAGTCCTATGACTATGGTTCTAACAAATACCATGGCTTGAAAGT  150

seq1  AAAACCAGTCCTCAAATTGGCAATTTTTACTGATAATTCTGTGTAGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGTCCTCAAATTGGCAATTTTTACTGATAATTCTGTGTAGTGCT  200

seq1  TTTAGTCTTGCCAGGCAATATTGGATAGTATTAGAATAATATTCAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTTGCCAGGCAATATTGGATAGTATTAGAATAATATTCAATGAT  250

seq1  ATTTGACAGAATTTCTAGCATTTAAACATTTGCTATATTTTATAAACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAGAATTTCTAGCATTTAAACATTTGCTATATTTTATAAACCAC  300

seq1  CAACACATTGATATATACTGTTGATTAAGCATTTACATGTAATGAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATTGATATATACTGTTGATTAAGCATTTACATGTAATGAATAAG  350

seq1  GATAGAAAGATGCCAGAGATATTTTAAGAATATCATATAATTTTGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAAGATGCCAGAGATATTTTAAGAATATCATATAATTTTGAGAAA  400

seq1  TCTTGAACATTTCTAGGAATTCTAATATTTTTCCTTGAGTTATAAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAACATTTCTAGGAATTCTAATATTTTTCCTTGAGTTATAAACATA  450

seq1  AGTGTTTCCATTCACAATTTGGAAACAATGACTTTAAAACAACTATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCCATTCACAATTTGGAAACAATGACTTTAAAACAACTATCTTT  500

seq1  CAAAAACTGAGTTACATCTGGTGGATTCTCTTAAGTATATAATTTAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTGAGTTACATCTGGTGGATTCTCTTAAGTATATAATTTAGAAT  550

seq1  TCTTTTAAATAAACATCAAACAAACAAAAGTTCTCGACTATGTGTGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAATAAACATCAAACAAACAAAAGTTCTCGACTATGTGTGAGGT  600

seq1  CCAAACACTTTGCGTGCATTAAGAACCAAGTGGGGGATTCCTGTCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACTTTGCGTGCATTAAGAACCAAGTGGGGGATTCCTGTCAGAAG  650

seq1  AAGAAGAACAGTCAGAAGAACAGGTATGCCTGTAGAACTCTTCCATTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACAGTCAGAAGAACAGGTATGCCTGTAGAACTCTTCCATTTCC  700

seq1  TTGGTTCAGTCCTCATAGACTCAATCCTACCCCCATTGATCTTTCTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCAGTCCTCATAGACTCAATCCTACCCCCATTGATCTTTCTTCCT  750

seq1  TCCCCATCCAGTTGCTGTGTCCCAGCCCGTAACTCCCCAGCTTGAGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCCAGTTGCTGTGTCCCAGCCCGTAACTCCCCAGCTTGAGTGGA  800

seq1  GACAGGACCAGAGGTCATGCCAGTTGCCAGAACTCCAGGTAAGCTGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACCAGAGGTCATGCCAGTTGCCAGAACTCCAGGTAAGCTGCATG  850

seq1  CATAGGGAATTC  862
      ||||||||||||
seq2  CATAGGGAATTC  862

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Alignment Information