MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-338N17
Chromosome	1 (Build37)
Map Location	18,249,488 - 18,250,324
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15, Crispld1, LOC665564, LOC100040126, Crisp4, EG574082, EG654460
Downstream gene	Defb17, LOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Rbm6-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108212 MGI:1889580
definition	note : RNA binding motif protein 6, pseudogene 1 pseudo : _no_value

name	Ppia-ps1_125.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606716
definition	note : peptidylprolyl isomerase A pseudogene 1_125.1 pseudo : _no_value

name	Pi15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94227 MGI:1934659
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crispld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Crisp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG574082 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	EG654460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Defb17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	EG435611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100040189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tcfap2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226896 MGI:2153466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040413 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins pseudo : _no_value

name	Tcfap2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pi15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716490 GeneID:94227 MGI:1934659
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidase inhibitor 15 transcript_id : NM_053191.1

name	Crispld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173745 GeneID:83691 MGI:1934666
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein LCCL domain containing 1 transcript_id : NM_031402.2

name	Crisp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88595370 GeneID:78081 MGI:1925331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 4 transcript_id : NM_030033.1

name	EG654460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84993771 GeneID:654460 MGI:3648148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG654460 transcript_id : NM_001039123.1

name	Defb17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:91064862 GeneID:654464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : defensin beta 17 transcript_id : NM_001040027.1

name	EG435611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233623 GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG435611 transcript_id : XM_487581.5

name	Tcfap2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346596 GeneID:226896 MGI:2153466
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2, delta transcript_id : NM_153154.1

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609880 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_009334.2

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609884 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_001025305.1

name	Pi15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716491 GeneID:94227 MGI:1934659
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : cysteine-rich secreted protein product : protease inhibitor 15 protein_id : NP_444421.1

name	Crispld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173746 GeneID:83691 MGI:1934666
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : LCCL domain containing cysteine-rich secretory protein 1 product : cysteine-rich secretory protein LCCL domain containing 1 protein_id : NP_113579.2

name	Crisp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88595371 CCDS:CCDS14835.1 GeneID:78081 MGI:1925331
definition	codon_start : 1 product : cysteine-rich secretory protein 4 protein_id : NP_084309.1

name	EG654460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993772 GeneID:654460 MGI:3648148
definition	codon_start : 1 product : defensin beta 18 protein_id : NP_001034212.1

name	Defb17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:91064863 GeneID:654464
definition	codon_start : 1 product : defensin beta 17 protein_id : NP_001035116.1

name	EG435611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233624 GeneID:435611 MGI:3649018
definition	codon_start : 1 product : similar to thioredoxin-like 4A protein_id : XP_487581.5

name	Tcfap2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346597 CCDS:CCDS14838.1 GeneID:226896 MGI:2153466
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 product : transcription factor AP-2, delta protein_id : NP_694794.1

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609881 CCDS:CCDS14839.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : transcription factor AP-2 beta isoform 1 protein_id : NP_033360.2

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609885 CCDS:CCDS14840.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : transcription factor AP-2 beta isoform 2 protein_id : NP_001020476.1

name	LOC665564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665564
definition	number : 1 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 5 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 4 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 3 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 2 pseudo : _no_value

name	LOC100040126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040126
definition	number : 1 pseudo : _no_value

name	LOC383499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383499
definition	number : 1 pseudo : _no_value

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 1 pseudo : _no_value

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:21341
definition	standard_name : WI-18724

name	(CDS detail)
type	STS
link
xref	UniSTS:207131
definition	standard_name : BE136390

name	(CDS detail)
type	STS
link
xref	UniSTS:163202
definition	standard_name : RH126494

name	(CDS detail)
type	STS
link
xref	UniSTS:125442
definition	standard_name : MHAa88h1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128575
definition	standard_name : D1Mit230

name	(CDS detail)
type	STS
link
xref	UniSTS:123296
definition	standard_name : 16.MMHAP17FF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128651
definition	standard_name : D1Mit298

name	(CDS detail)
type	STS
link
xref	UniSTS:164108
definition	standard_name : AI606113

name	LOC383495 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233627 GeneID:383495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : hypothetical LOC383495 pseudo : _no_value transcript_id : XR_031682.1

name	EG574082 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:124517712 GeneID:654454 MGI:3646526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG574082 pseudo : _no_value transcript_id : NR_002879.2

name	LOC100040413 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233631 GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031764.1

clone name	MSMg01-071N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-308H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046H17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-338N17.b	B6Ng01-338N17.g
ACC	GA123020	GA123021
length	1,226	837
definition	B6Ng01-338N17.b	B6Ng01-338N17.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcactaaccaaatccaagaacacatcaaagcaatcatccatcat gacgaagtaggcttcatttcaggaattcagggatggtttaatatatggaa atccatcaacgtaacccattatataaacaaactcaaaaacaaaaaccaca tgattacctcgttatatgctgagaaagcatttaacaaaatccaaaaacca ttcatgataaaagtcttggaaagatcaggaattcaaggcccatacctaaa cataatataagcaatatatagcaaaccagtaaccaacatcaaagtaaatg gagagaagctggaagcaatccctctaaaatcagggactagacaaggctgc ccactttctccctacctattcaatatagaacttaaagtcctagctagagt aaatagacaacaaaaggaggtcaaggggatagaaattggaaaggaagaag tcaaaataccactttttgcagatgatatgatagcatatattagtgaccct aaaaattccaccagagaactcctaaacctgataaacagcttcagtgcagt agatggatttacaattaactcaaacaaatcaatggcctttctctacacaa aggataaacaggctgagaaagaaatttgggaaacaacaccctttacaata gtcacaaataatataaaataccttggtgtaactgtaactaaggaagtgaa agatctatatgataagaacttcaagtctctgaagaaagaaatttaagaag atcttagaagatggaaagatctctcatgctcatggattagcaggatcaat atagtaaaaaaatggttatattgcagaaagcaatctacagattcaatgca atcaccatcaaaattccaactcaattcttcagtgaattagaaagggcaat ttgaaaattcatctggaataacaaaaaacctaggatagcataaactattc tcaaccataaagcacctctgagggaatcaccatgcctgatctcaagctgt actaacagagcaattgtaataaaaactgcatggtaccggtatagcgacag aacaggtagatcaatggaatagaatgagactcaaaatgatcccaccacac ctctggtcactatctttgaacaggagctaagccatcagttgaaaaaagaa caagccatttgacaatgtactgccaacctggggtttatcaatgtagaaga aatgtccaaaccagaatactccatct	gaattcccttgaggtacagtcttccagtacatatatacactgtcagctta ttacccccacgaaaatgtataaactactagactttgagatcagatgttga taacatggatcattttcatgagagacaaagcacttaagagagatcaatca agatacgagatctaaaatagggagaaaattcacatcaccattagtgtcta gttgtgtttattatttagcagaggaaaatatgaatcccaaatgatgaaga gcgtttttagaaagaagaatgcagacatagttattttgtatcaaaatata aactatgcccagtaatttagttctgctctctacttctaagggctggtatc acatgaggagatacacacaagagagcaacacacatttccaagtcttgtga ggattctggtttgcctctgtttagcctcacattattttctgcctctgagt acatcagtattcttccctgtaagtctacacaataaatccatataatatcc atccaaaattcctaatttttattatttgcatagcagtacaattcagaagt ttctatcaatataaaaaaagcttgtgaaacagtcactcacccaataaaat agaataggtttgggaaaattaattaaggagaatggaaattttaaagacat acatatttactagactataaatcagaaatttagaaaataaataacttatt ttattgtggcctttctgtagttctggattcaaatgcagacaaaaggcgtg aggaaatttatagtaaacattgtttacaacattgtgatacacatggtagc aatatattttcaccacaaaaattgtgtgtgtgtgtat
quality values	Open. Hide. 58 31 35 35 62 62 62 41 31 47 47 62 62 62 41 29 62 62 62 62 47 32 49 62 62 62 59 43 51 43 43 29 34 28 38 50 46 59 62 62 59 62 62 62 59 59 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 59 62 62 59 62 62 62 62 59 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 62 62 62 62 58 58 58 58 49 49 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 54 54 46 58 58 58 47 58 58 54 58 54 58 58 54 54 58 58 58 58 54 58 58 58 52 58 58 58 58 54 54 58 58 45 54 58 58 58 58 53 58 53 51 50 58 47 58 49 58 58 53 58 45 41 58 58 58 54 58 58 58 58 58 58 58 39 58 58 58 53 58 58 40 37 58 58 58 58 58 58 58 49 53 40 58 51 52 51 58 58 44 58 58 50 48 22 58 50 54 50 54 51 52 51 40 58 41 50 50 54 51 53 53 46 49 58 58 53 53 54 43 58 49 58 51 50 58 53 50 40 49 51 58 41 39 50 41 46 40 44 35 58 44 58 40 50 51 32 49 49 52 39 31 42 53 53 47 53 53 53 54 32 41 49 31 49 40 41 52 54 38 16 51 47 46 50 51 53 53 52 50 53 42 54 54 52 40 52 54 28 52 54 38 31 53 34 54 42 41 34 26 42 54 45 45 23 36 40 33 35 22 53 54 53 54 51 45 26 27 40 51 53 53 33 33 32 52 31 45 40 35 33 52 36 42 33 34 32 25 34 20 15 15 32 32 34 31 33 34 32 32 32 40 34 53 51 49 51 52 51 32 32 53 45 31 46 32 32 27 41 41 41 19 31 24 51 51 31 31 30 31 27 31 42 38 39 38 31 31 29 31 31 32 17 31 30 42 31 26 22 32 31 24 27 22 25 31 30 17 51 46 31 36 41 22 31 24 30 27 37 34 24 29 41 31 31 26 43 36 32 34 42 42 22 32 27 31 32 31 43 46 28 31 48 32 21 30 26 23 48 41 36 32 46 46 31 34 41 33 28 35 32 31 31 26 21 32 31 22 22 31 30 44 46 46 41 18 16 15 32 25 21 31 26 21 26 19 27 23 41 34 48 32 26 32 31 31 32 32 24 19 25 16 31 19 16 18 13 32 25 20 31 18 17 31 34 29 22 19 31 18 47 14 22 25 28 21 19 13 31 21 21 27 23 29 21 29 20 19 25 23 26 18 19 22 21 32 34 31 21 21 15 10 9 17 15 8 18 10 19 17 11 23 16 32 27 30 18 21 29 48 47 47 29 28 32 34 27 21 21 18 19 4 18 21 13 11 9 7 18 27 24 14 28 26 10 5 6 20 27 6 3 3 9 21 24 21 15 27 19 20 15 21 15 23 18 13 9 21 21 9 16 13 3 5 11 7 28 8 6 21 6 30 38 18 6 11 20 27 14 38 25 5 5 5 4 4 4 15 7 9 10 7 16 17 3 7 6 8 15 3 2 8 9 30 23 16 9 10 6 9 3 6 4 5 9 10 12 5 2 2 6 12 21 27 6 6 4 7 10 9 25 28 17 22 6 4 12 12 5 6 4 4 5 15 8 22 28 10 13 7 4 5 15 4 2 1 5 17 11 2 2 2 6 7 12 7 5 8 16 14 7 4 19 21 5 9 8 5 7 9 7 5 5 4 19 21 5 17 8 7 9 9 4 7 5 11 6 5 4 5 6 7 7 7 6 4 7 5 12 5 6 13 3 2	Open. Hide. 62 47 56 47 62 62 51 51 32 32 29 20 23 38 45 51 59 59 62 62 62 62 62 62 59 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 59 54 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 56 62 54 49 42 49 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 49 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 45 49 58 45 54 58 58 58 58 58 54 58 54 58 58 58 54 58 54 58 43 54 58 58 58 54 52 58 58 52 58 58 58 54 58 58 58 47 39 58 54 54 58 58 58 58 49 39 58 58 54 54 58 58 58 54 58 58 58 54 52 40 54 52 54 40 44 54 58 50 48 47 34 28 58 51 53 58 58 41 49 53 50 58 51 51 54 49 45 47 58 50 58 58 49 58 49 58 48 34 49 40 52 51 41 58 48 41 58 43 40 58 39 22 58 39 49 58 48 39 58 58 47 40 58 58 49 53 46 36 51 46 49 39 51 50 58 58 51 50 54 53 53 52 49 40 50 50 53 42 58 49 49 49 35 32 58 24 24 39 58 39 41 39 54 58 58 49 49 58 58 50 49 44 54 37 51 50 37 54 54 51 49 40 38 51 53 37 54 24 16 54 52 54 44 40 52 54 37 34 26 49 51 41 40 54 54 19 9 23 52 32 54 40 37 34 29 40 33 38 30 24 54 54 37 38 54 33 45 52 53 33 24 46 38 54 26 15 54 37 37 37 42 52 37 45 51 51 32 25 34 33 38 32 49 16 23 29 26 31 33 26 34 48 51 32 31 45 26 32 32 32 32 31 32 53 49 31 53 30 45 45 28 33 31 32 31 45 46 46 45 31 32 26 27 31 43 32 51 41 41 19 21 24 51 24 51 20 46 19 51 11 46 23 31 5 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_18249488_18250324
seq2: B6Ng01-338N17.g_69_905 (reverse)

seq1  ATACACACACACACAATTTTTGTGGTGAAAATATATTGCTACCATGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACAATTTTTGTGGTGAAAATATATTGCTACCATGTGTA  50

seq1  TCACAATGTTGTAAACAATGTTTACTATAAATTTCCTCACGCCTTTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTTGTAAACAATGTTTACTATAAATTTCCTCACGCCTTTTGTC  100

seq1  TGCATTTGAATCCAGAACTACAGAAAGGCCACAATAAAATAAGTTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGAATCCAGAACTACAGAAAGGCCACAATAAAATAAGTTATTTA  150

seq1  TTTTCTAAATTTCTGATTTATAGTCTAGTAAATATGTATGTCTTTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAATTTCTGATTTATAGTCTAGTAAATATGTATGTCTTTAAAAT  200

seq1  TTCCATTCTCCTTAATTAATTTTCCCAAACCTATTCTATTTTATTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCTCCTTAATTAATTTTCCCAAACCTATTCTATTTTATTGGGTG  250

seq1  AGTGACTGTTTCACAAGCTTTTTTTATATTGATAGAAACTTCTGAATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGTTTCACAAGCTTTTTTTATATTGATAGAAACTTCTGAATTGT  300

seq1  ACTGCTATGCAAATAATAAAAATTAGGAATTTTGGATGGATATTATATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATGCAAATAATAAAAATTAGGAATTTTGGATGGATATTATATGG  350

seq1  ATTTATTGTGTAGACTTACAGGGAAGAATACTGATGTACTCAGAGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGTGTAGACTTACAGGGAAGAATACTGATGTACTCAGAGGCAGA  400

seq1  AAATAATGTGAGGCTAAACAGAGGCAAACCAGAATCCTCACAAGACTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTGAGGCTAAACAGAGGCAAACCAGAATCCTCACAAGACTTGG  450

seq1  AAATGTGTGTTGCTCTCTTGTGTGTATCTCCTCATGTGATACCAGCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGTTGCTCTCTTGTGTGTATCTCCTCATGTGATACCAGCCCTT  500

seq1  AGAAGTAGAGAGCAGAACTAAATTACTGGGCATAGTTTATATTTTGATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAGAGCAGAACTAAATTACTGGGCATAGTTTATATTTTGATAC  550

seq1  AAAATAACTATGTCTGCATTCTTCTTTCTAAAAACGCTCTTCATCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTATGTCTGCATTCTTCTTTCTAAAAACGCTCTTCATCATTTG  600

seq1  GGATTCATATTTTCCTCTGCTAAATAATAAACACAACTAGACACTAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCATATTTTCCTCTGCTAAATAATAAACACAACTAGACACTAATGG  650

seq1  TGATGTGAATTTTCTCCCTATTTTAGATCTCGTATCTTGATTGATCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAATTTTCTCCCTATTTTAGATCTCGTATCTTGATTGATCTCTC  700

seq1  TTAAGTGCTTTGTCTCTCATGAAAATGATCCATGTTATCAACATCTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGCTTTGTCTCTCATGAAAATGATCCATGTTATCAACATCTGATC  750

seq1  TCAAAGTCTAGTAGTTTATACATTTTCGTGGGGGTAATAAGCTGACAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCTAGTAGTTTATACATTTTCGTGGGGGTAATAAGCTGACAGTG  800

seq1  TATATATGTACTGGAAGACTGTACCTCAAGGGAATTC  837
      |||||||||||||||||||||||||||||||||||||
seq2  TATATATGTACTGGAAGACTGTACCTCAAGGGAATTC  837

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information