BAC Information

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BAC

Clone NameB6Ng01-340G03
Chromosome1 (Build37)
Map Location 151,445,830 - 151,618,914
singlet/doubletdoublet
Overlap geneLOC100042813
Upstream geneLOC100042792, LOC435647
Downstream genePla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340G03.bB6Ng01-340G03.g
ACCGA124108GA124109
length472856
definitionB6Ng01-340G03.b B6Ng01-340G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,618,437 - 151,618,914)(151,445,830 - 151,446,685)
sequence
tccataataacctaatatagtagtttctatttaaatcataacatgaaaga
tagatgctatagctaagatttttttgaaattgatagtttatgttatctta
agatattagtgatggctgacttttgacaggcagccataaaatttcagtaa
ctttgcaagtactgttagaagtaaaaacttcatgttgcaaaaattaacat
ttaaattttaataagttgaaaagcttcttttttaaaaaagatctatttat
tcatttattgtatgtgagtatgctgttactgtcctcagacacactagaag
atcccattacagatggttgtaagccaccatgtggttgctggaattgaact
caggacctctggaagagcagtcagtgctcttaaccactgagccatttctc
cagacagggagatggggaggaggtatgggatgtacagcagtaagagggtg
aacagggtggtggtggggaata

gaattcctgtggaagaggaggagaaaggattttaggagccagaggggcat
aggacattacaacacctataaaatcagctaactgggacccatagggaccc
acagagactgaaccaccaaccagaaagtatgcatgggactgacctaggct
ctctacacatatgtaacagttgtgaagcttggtcttcatgtgggaaccct
aacagtggaggcaatgattctgactcagttgcctgcttttggggatcctt
tcccagtactgaactcactcttctagcctcaattggagatgagtctagtc
ttactgaaacttgatatgtcagatatccatgggagatctcctcttttctc
aagacaaatggaggggaagtggatggggggaagggccaaggggaaggact
aggaggagagcagggaggggaaactgcagttgggatataaagttaattaa
ttatttcattaaaatataattagttaattactattttaaaaagaaaatgc
agaataaaggttcatttaggtaatagttacatatatttataaatacatac
atgaatgctcagaataaaaacgatcgaattttcagagcaccgacttgtga
attctgaaacgagaaatggcatgatattattatctccggaacttatcaaa
catgtatatattttttctattagaaaaatttatgaaatattgttattcat
gttgcttttaattcacaaaacatatagtctttcagttagtatctgagcac
atgaaaaattctgttagttgttagagaactaagaattgactttacagcaa
gaatgtcaggaaatgagcaagagacctggtattctaatcagacttaatgt
ctatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151618437_151618914
seq2: B6Ng01-340G03.b_43_520 (reverse)

seq1  TATTCCCCACCACCACCCTGTTCACCCTCTTACTGCTGTACATCCCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCCACCACCACCCTGTTCACCCTCTTACTGCTGTACATCCCATAC  50

seq1  CTCCTCCCCATCTCCCTGTCTGGAGAAATGGCTCAGTGGTTAAGAGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCATCTCCCTGTCTGGAGAAATGGCTCAGTGGTTAAGAGCACT  100

seq1  GACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCAGCAACCACATGGTGGC  150

seq1  TTACAACCATCTGTAATGGGATCTTCTAGTGTGTCTGAGGACAGTAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACCATCTGTAATGGGATCTTCTAGTGTGTCTGAGGACAGTAACAG  200

seq1  CATACTCACATACAATAAATGAATAAATAGATCTTTTTTAAAAAAGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCACATACAATAAATGAATAAATAGATCTTTTTTAAAAAAGAAGC  250

seq1  TTTTCAACTTATTAAAATTTAAATGTTAATTTTTGCAACATGAAGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTTATTAAAATTTAAATGTTAATTTTTGCAACATGAAGTTTTT  300

seq1  ACTTCTAACAGTACTTGCAAAGTTACTGAAATTTTATGGCTGCCTGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAACAGTACTTGCAAAGTTACTGAAATTTTATGGCTGCCTGTCAA  350

seq1  AAGTCAGCCATCACTAATATCTTAAGATAACATAAACTATCAATTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGCCATCACTAATATCTTAAGATAACATAAACTATCAATTTCAAA  400

seq1  AAAATCTTAGCTATAGCATCTATCTTTCATGTTATGATTTAAATAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTAGCTATAGCATCTATCTTTCATGTTATGATTTAAATAGAAAC  450

seq1  TACTATATTAGGTTATTATGGAGAATTC  478
      ||||||||||||||||||||||||||||
seq2  TACTATATTAGGTTATTATGGAGAATTC  478


seq1: chr1_151445830_151446685
seq2: B6Ng01-340G03.g_68_922

seq1  GAATTCCTGTGGAAGAGGAGGAGAAAGGATTTTAGGAGCCAGAGGGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGAAGAGGAGGAGAAAGGATTTTAGGAGCCAGAGGGGCAT  50

seq1  AGGACATTACAACACCTATAAAATCAGCTAACTGGGACCCATAGGGACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTACAACACCTATAAAATCAGCTAACTGGGACCCATAGGGACCC  100

seq1  ACAGAGACTGAACCACCAACCAGAAAGTATGCATGGGACTGACCTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACTGAACCACCAACCAGAAAGTATGCATGGGACTGACCTAGGCT  150

seq1  CTCTACACATATGTAACAGTTGTGAAGCTTGGTCTTCATGTGGGAACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACACATATGTAACAGTTGTGAAGCTTGGTCTTCATGTGGGAACCCT  200

seq1  AACAGTGGAGGCAATGATTCTGACTCAGTTGCCTGCTTTTGGGGATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGAGGCAATGATTCTGACTCAGTTGCCTGCTTTTGGGGATCCTT  250

seq1  TCCCAGTACTGAACTCACTCTTCTAGCCTCAATTGGAGATGAGTCTAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTACTGAACTCACTCTTCTAGCCTCAATTGGAGATGAGTCTAGTC  300

seq1  TTACTGAAACTTGATATGTCAGATATCCATGGGAGATCTCCTCTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAAACTTGATATGTCAGATATCCATGGGAGATCTCCTCTTTTCTC  350

seq1  AAGACAAATGGAGGGGAAGTGGATGGGGGGAAGGGCCAAGGGGAAGGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAATGGAGGGGAAGTGGATGGGGGGAAGGGCCAAGGGGAAGGACT  400

seq1  AGGAGGAGAGCAGGGAGGGGAAACTGCAGTTGGGATATAAAGTTAATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGAGCAGGGAGGGGAAACTGCAGTTGGGATATAAAGTTAATTAA  450

seq1  TTATTTCATTAAAATATAATTAGTTAATTACTATTTTAAAAAGAAAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATTAAAATATAATTAGTTAATTACTATTTTAAAAAGAAAATGC  500

seq1  AGAATAAAGGTTCATTTAGGTAATAGTTACATATATTTATAAATACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGGTTCATTTAGGTAATAGTTACATATATTTATAAATACATAC  550

seq1  ATGAATGCTCAGAATAAAAACGATCGAATTTTCAGAGCACCGACTTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCTCAGAATAAAAACGATCGAATTTTCAGAGCACCGACTTGTGA  600

seq1  ATTCTGAAACGAGAAATGGCATGATATTATTATCTCCGGAACTTATCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAACGAGAAATGGCATGATATTATTATCTCCGGAACTTATCAAA  650

seq1  CATGTATATATTTTTTCTATTTAGAAAAA-TTATGAAATATTGTTATTCA  699
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  CATGTATATATTTTTTCTA-TTAGAAAAATTTATGAAATATTGTTATTCA  699

seq1  TGTTGCTTTTAATTCACAAAACATATAGTC-TTCAGTTTAGTACCTGAGC  748
      |||||||||||||||||||||||||||||| ||||| |||||| ||||||
seq2  TGTTGCTTTTAATTCACAAAACATATAGTCTTTCAG-TTAGTATCTGAGC  748

seq1  ACATGAAAAATTCTGTTAGTTGTTAGAGAACTAAGAATTGACTTTACAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAAATTCTGTTAGTTGTTAGAGAACTAAGAATTGACTTTACAGC  798

seq1  AAGAATGTCAGGAAATGAGCAAGAGACCTGTTATTCTAATCAGACTTTAT  848
      |||||||||||||||||||||||||||||| |||||||||||||| ||| 
seq2  AAGAATGTCAGGAAATGAGCAAGAGACCTGGTATTCTAATCAGAC-TTAA  847

seq1  TGTCTATG  856
      ||||||||
seq2  TGTCTATG  855


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