BAC Information

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BAC

Clone NameB6Ng01-341D19
Chromosome1 (Build37)
Map Location 144,661,472 - 144,662,506
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341D19.bB6Ng01-341D19.g
ACCGA124684GA124685
length7191,045
definitionB6Ng01-341D19.b B6Ng01-341D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaactgaggaatcttgactggctgaggagcacctaaagaaatg
ttcaaagtccttggtgatcagagaaatgcaaatcaaatgacactgagatt
ccacctttcaccaatcaaaatgactaagatcaaatccttaggtgacaaca
catgttggagaggatgtggagaaagaggaacactccttcattgctggtgg
aattgcaaactggtacaaccattgtggaaatcaatctggcgattcctcag
aaaattggaaatagatctacctgaagacccaactataccactcttgggaa
tatacctaaaagatgccccaccatgccacaggggcccatgttctactatg
ttcataccagccttatttgtgatagccagcagctggaaacaacccaaatt
tcccacaacagaagaatggatacagaaaatgttgttcatgaaatattact
tagctattaagaatgcagacatcctgcattttctagacaaataaatagaa
ctagaaaatatcatcctgagtgaggtaactcagactcaaaagggcatcca
tggtatgtactcaataataactggatattagaaaaaaataaaaaataata
aattttttaaaaagtgcagaatacccatgatacagtccacagaacataaa
aaggtcaacaagctgaagggcccaagtgaggatacctcagtcccacttgg
gagagaggaggagagaggg
gaattctaatgtatttccaaacttactctgcacatggattaatttattcc
aatgaatattttttctctcctattttaatagagtctacttcttgctcccg
actcatacaaaaggtgaaacaatttatatacactaactacatgtagttga
ggatcctgaggatcctatcctattctttgctttttttttttttttttaga
atgaaattgccaaattaatttgtctgatcttatgttcttaggcttaatct
agattatttttaagtctcatcacacacacacacacacacaaatatgcaca
cacaaacatatacacaaaacatggtgataaaagatagtttagctaagcag
attatgttgcatgagaaatattttattatatgtatgtggtagttagggta
agatcattagataaatacatattgatcttgtttatatggaaatcttgttt
ctctttattgacagtagccaataaataatattattactataaatgccttt
agacaatcccgagttattgtaaatatttttgtgtgttctatttttcctga
attcaacatactaaatgctgaatcaaagtttttttttaaagatattcata
gttcacttgctagtcttttaaactatataaataggatattaataataaaa
aatgcatagtacaacactttctattgttgcaatttcagaaatttagtagt
agtttcactaagcaaataaattatactgaaaattgaatttccacattaaa
aatatgttgttacatatattaaatttagttagtaaacttgcatatatgta
atttatttttcataaattcattccagatgatatatttacattaattttac
ccattaagttctaatcttaatattaagttaaaagtttattaaaaatttca
tcaacagtttacttgggaacacagtcttgaagtctcctgacttctaacaa
ttaagtcactaagaatgtccggacctgtccttatgattttactttcttct
tatcagggtcatactggatgaaaggaccgcccacttgtagttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144661472_144662506
seq2: B6Ng01-341D19.g_68_1112 (reverse)

seq1  AGGAACTACAGGTGGGCG--TCTTTCATCTAGTATGACACTGATAAGAAA  48
      |||||||||| |||||||   |||||||| |||||||| |||||||||| 
seq2  AGGAACTACAAGTGGGCGGTCCTTTCATCCAGTATGACCCTGATAAGAA-  49

seq1  GGAAAGTAAAAATCATAAAGACATGT-CAGACA-TCTTAGTGACTTAATG  96
       |||||| |||||||||| |||| || | |||| ||||||||||||||| 
seq2  -GAAAGT-AAAATCATAAGGACAGGTCCGGACATTCTTAGTGACTTAATT  97

seq1  CTTAGAAGTCA-GAGAC-TCAAGACTGTGTTTCCAAGTAAACTGTTGATG  144
       |||||||||| ||||| ||||||||||||| ||||||||||||||||||
seq2  GTTAGAAGTCAGGAGACTTCAAGACTGTGTTCCCAAGTAAACTGTTGATG  147

seq1  AAATTTTTAATAAACTTTTAACTTAATATTAAGATTAGAACTTAATGG--  192
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  AAATTTTTAATAAACTTTTAACTTAATATTAAGATTAGAACTTAATGGGT  197

seq1  TAAATTAATGT-AATATATCATCT-GAATGAATTTATGAAAA--TAATTA  238
       |||||||||| |||||||||||| |||||||||||||||||   |||||
seq2  AAAATTAATGTAAATATATCATCTGGAATGAATTTATGAAAAATAAATTA  247

seq1  CATATATGC-AGTTTACTAACTAAATTTAATATATGTAACAACATATTTT  287
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGCAAGTTTACTAACTAAATTTAATATATGTAACAACATATTTT  297

seq1  TAATGTGGAAATTCAATTTTCAGTATAAATTTATTTGCTTAGTGAAACTA  337
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAATGTGGAAATTCAATTTTCAGTAT-AATTTATTTGCTTAGTGAAACTA  346

seq1  CTACTAAATTTCTGAAATTGCAACAATAGAAAGTGTTGTACTATGCA-TT  386
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTACTAAATTTCTGAAATTGCAACAATAGAAAGTGTTGTACTATGCATTT  396

seq1  TTTATTATTAATATCCTATTTATATAGTTTAAAAGACTAGCAAGTGAACT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTAATATCCTATTTATATAGTTTAAAAGACTAGCAAGTGAACT  446

seq1  ATGAATATCTTTAAAAAAAAACTTTGATTCAGCATTTAGTATGTTGAATT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATCTTTAAAAAAAAACTTTGATTCAGCATTTAGTATGTTGAATT  496

seq1  CAGGAAAAATAGAACACACAAAAATATTTACAATAACTCGGGATTGTCTA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAATAGAACACACAAAAATATTTACAATAACTCGGGATTGTCTA  546

seq1  AAGGCATTTATAGTAATAATATTATTTATTGGCTACTGTCAATAAAGAGA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTTATAGTAATAATATTATTTATTGGCTACTGTCAATAAAGAGA  596

seq1  AACAAGATTTCCATATAAACAAGATCAATATGTATTTATCTAATGATCTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATTTCCATATAAACAAGATCAATATGTATTTATCTAATGATCTT  646

seq1  ACCCTAACTACCACATACATATAATAAAATATTTCTCATGCAACATAATC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACTACCACATACATATAATAAAATATTTCTCATGCAACATAATC  696

seq1  TGCTTAGCTAAACTATCTTTTATCACCATGTTTTGTGTATATGTTTGTGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGCTAAACTATCTTTTATCACCATGTTTTGTGTATATGTTTGTGT  746

seq1  GTGCATATTTGTGTGTGTGTGTGTGTGTGATGAGACTTAAAAATAATCTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATTTGTGTGTGTGTGTGTGTGTGATGAGACTTAAAAATAATCTA  796

seq1  GATTAAGCCTAAGAACATAAGATCAGACAAATTAATTTGGCAATTTCATT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGCCTAAGAACATAAGATCAGACAAATTAATTTGGCAATTTCATT  846

seq1  CTAAAAAAAAAAAAAAAAAGCAAAGAATAGGATAGGATCCTCAGGATCCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAAAAAAAAAAAAGCAAAGAATAGGATAGGATCCTCAGGATCCT  896

seq1  CAACTACATGTAGTTAGTGTATATAAATTGTTTCACCTTTTGTATGAGTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACATGTAGTTAGTGTATATAAATTGTTTCACCTTTTGTATGAGTC  946

seq1  GGGAGCAAGAAGTAGACTCTATTAAAATAGGAGAGAAAAAATATTCATTG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAAGAAGTAGACTCTATTAAAATAGGAGAGAAAAAATATTCATTG  996

seq1  GAATAAATTAATCCATGTGCAGAGTAAGTTTGGAAATACATTAGAATTC  1035
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTAATCCATGTGCAGAGTAAGTTTGGAAATACATTAGAATTC  1045