BAC Information

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BAC

Clone NameB6Ng01-342H23
Chromosome1 (Build37)
Map Location 103,233,012 - 103,233,879
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC100041909
Downstream geneLOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342H23.bB6Ng01-342H23.g
ACCGA125564GA125565
length1,0201,139
definitionB6Ng01-342H23.b B6Ng01-342H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtacctcatttttttttaatagggttatttg
attttctggaatcaatcttcttgaattctctccatatattggatatttgt
cccccatctgatttaagattggtaaagattctttcccagtctgttggtgg
cctttttgacttattgacagtgtgttctgccttacagaagctttgcaatt
ttatgaggtcccatttgtcaattctctatctatcagcacaagccattgct
gtacagtttaggaattcttcccctgtgcccatatcttggaggattttccc
cactttctcctctacaagtttcagtgtctctggttttatatggagatcat
tggtcctcttagactttgccttattacaaggagattagaatgtatcagtt
tgcattcttttacatgataactgccagttgtgccagtatcatttgttgaa
aatgctgtctttttttcactggatggttttagctcccttgtcaaatagca
agtgaccataggtgtgtgccttcatttctgggtctttaattctgttccat
tgatctacctgttttgcccctgtaccagtaccatgcagtttctatcacaa
ttgctctagtacagctttaggtcaggcatggtaattccaccagaaattct
tctatcattgagaagagtttttgctatcatggggttttgctcggtttttt
gtcccgtctgttactccagatgaatttacaaattgcccctttcctaattc
ggtgaagaaattgagttggaaatttggatgggggattgcatttaaatctg
tagaatttgctttctgcaagaatagccatttttactaatatttgatcctg
ccgatccatgagcggtggggagattttttccatctactgaggatcgttga
atttcttcttcagagacatggaggtcttatcatacgagtctgttcactcg
tagtagagtacacgaggtattcatatatttcgagtattgcgagggggtgt
ttctaatctcttcaatctgc
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttaccttttgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcatgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccatctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccagagccaagaaggct
cccgccggcgcctgtgccacaaaacctctcaggccaggcaggcccccgtg
ctctcaccaggaaggtggccggctatctcttaattttctatttaatatgt
tcctacagccttccttccattccattcaatttgttcctttataaaacata
gactcaggactaatctgtgctagatttcgaaggagagggaaaatgacaaa
tattagttttcatggtactttcatatatttaatgtagagtgaattaaaga
actaactatgctattaaaaatccagtgattatgtagatatgatgaattgg
acaccaattactctatagagtttctgatcctcatgatatttatgtgtcct
caagagcatgaaggactgcctacaggcttgcttccaagtcttattgagta
tttgtagtcctgtagaacgacaggtgaattcatttggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103233012_103233879
seq2: B6Ng01-342H23.g_346_1206

seq1  CTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTTT  50

seq1  CAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGG  100

seq1  TGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGG  150

seq1  AAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCTG  200

seq1  TGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCTG  250

seq1  CCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAGC  300

seq1  TGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAAC  350

seq1  GGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCG  400

seq1  GAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCAC-AAACCTC  449
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAAACCTC  450

seq1  TCAGGCCAGGCAGGCCCCCGTGCTCTCACCAGGAAGGTGGCCGGCTATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAGGCAGGCCCCCGTGCTCTCACCAGGAAGGTGGCCGGCTATCT  500

seq1  CTTAATTTTCTATTTAATATGTTCCTACAGCCTTCCTTCCATTCCATTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTTCTATTTAATATGTTCCTACAGCCTTCCTTCCATTCCATTCA  550

seq1  ATTTGTTCCTTTATAAAACATAGACTCAGGACTAATCTGTGCTAGATTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCCTTTATAAAACATAGACTCAGGACTAATCTGTGCTAGATTTC  600

seq1  GAAGGAGAGGGAAAATGACAAATATTAGTTTTCATGGTACTTTCATATAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAGGGAAAATGACAAATATTAGTTTTCATGGTACTTTCATATAT  650

seq1  TTAATGTAGAGTGGAATTAAAAGAACTAACTATGCTATTAAAAATCCAGT  699
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  TTAATGTAGAGT-GAATT-AAAGAACTAACTATGCTATTAAAAATCCAGT  698

seq1  GATTAATGTAGATAATGATTGAATTGAACACAATTAACTCTATAGAGTTT  749
      |||| |||||||| |||| ||||||| |||| | | ||||||||||||||
seq2  GATT-ATGTAGAT-ATGA-TGAATTGGACACCAATTACTCTATAGAGTTT  745

seq1  CTGGATCCTCAATGATTATTTAATGTGTCCTCAAGAGCATGAAAAGAATT  799
      || ||||||| |||| ||||| ||||||||||||||||||| || || | 
seq2  CT-GATCCTC-ATGA-TATTT-ATGTGTCCTCAAGAGCATG-AAGGACTG  790

seq1  GCTACAG--TTTGTTCCAGGTCTTTATTGAGTGTATTTGTAGTCACTGTA  847
       ||||||  ||  ||||| ||| |||||||  |||||||||||| |||||
seq2  CCTACAGGCTTGCTTCCAAGTC-TTATTGA--GTATTTGTAGTC-CTGTA  836

seq1  ----GACAGCATGGA-TCATTTGGCG  868
          |||||  || | ||||||||||
seq2  GAACGACAG-GTGAATTCATTTGGCG  861