BAC Information

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BAC

Clone NameB6Ng01-344L08
Chromosome1 (Build37)
Map Location 114,158,222 - 114,159,389
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897
Downstream geneLOC666615, LOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344L08.bB6Ng01-344L08.g
ACCGA127123GA127124
length1,2411,148
definitionB6Ng01-344L08.b B6Ng01-344L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgacatagcgaagccttcaccaatgtttcaatgtcctagaaaat
ccttgaagccgaggagcttggaattcagtaagaatgttacctattcagta
acattcaaatttacttatagtagagatgggtgaaactaattaggcattac
aaagaacagagctagaacagctcagggatagtctgcagagtgattacttt
ggacagtagccagtcttacccaaacaagggaatacacaatggcctagcta
ataagtgtgttttaccttgtaagagttagggaatcccactgagacaggaa
tcatcactacagccaggtatagcaggctacattgtgtggagagccggtac
ttgctgcgagcaatcacatgtgtgccgccagtaatctctgaggagagccg
tgtgtgccgcgagcaatcaccattataagatggcgcgggcctccgctgtg
cctaactagtaaacaagccttgcacgcaggtgcaagagtgaattcactcc
tagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaacg
aatcgggagctgtcacgccatatcaggtgctgaaacgtcacgctgcgggt
tataaaagcagcgccattttcccggttcaggatcttcctgagaagcaagc
aataaagcttttgccacggaagattctggtttgttgcgtctttcttgccg
gtcgagcgggacgcaataagtggcgccgaagaacccgggaactgtcatca
caccggcgcaaggaagatccctcgttcgcggggcagaatcagaaccgtgg
gacaaaaggctctacaaggtacgtacaatcttgaaatttcttcagagtta
gaaacccttttgattgtttgcacggcgattacacttttcctttcggtttc
attttgtttccaccactggaactgctgactggttcttagtcgcggtcagg
cctggacagcgcctggacagcgaccatttcagtcgcggtcagcctagaca
gcggcagtatgggaatctcccattctatagtagttgccctacgctcggtc
ctgaagcagtgttggccttaaaatcaccactaagacttaggagggatttg
tcagaaaagatatgacggttcgtaccatgggtatgcctgctcaggttcat
acccgtcgctcggggaccaccttgaaggaatctagtagacacgataagcc
accttagaccaggcattatgtcgcctgactggaatactcgt

gaattcaataaagtatgcaatggttcacaattattctgtaacccatgtat
cctaattaatatgaccctacgtaggaacctcaatgcagcagacattcaca
agtggcactcaaattccagggatccctgaaaaggaagatgtcaggagggt
gagaatctttggtaaagaaaccttattaaaaactgtgttccaaggttatt
tatcaaaaacgttttatagggaaacgggacaaagtaaatttattcattat
atttcatttttgcagcatttgcttaaaactcattgcgcttgagttaacac
cttccatccaaatatgtttatctgtttgtctatatgtttgtgtgtaggta
tatatgtatatatgtaaacatgcatgaatatttgtggagttaattgtgac
agtaggccgggcccagtcagagtgtgagtgtatgaatatgtatatgtgcc
tgtaaatatttgcctgtataaagcatattaattcttttttttccttcaga
ggagcaccagcaataaatcctttcactgaattcgctgctgctaagcagtt
atttgtcatatattagtgcttattaaagtataagtaataaagggttaaga
aagagtaaagtttccccagtgcttatttaagcatagttaaataaagtacc
aagagttacaatgtttaataaggaacatagttaaagaagatgccagtttt
tttttaataaccataaaataaagaaaaagggttttagaacattttagaag
ttatcagcaaccatcgagtataattagagtgctagaaggcaagagagcat
caatctataaaactaagtctggagactagatattgaaaattggtaaagga
caaaaagtgatgtaaaaaggctgttcatccctgggcggtggtggctcacg
cctttaatcccagcacttgggaggcagaggcaggtggatttctgagtttg
agccagcctggtctacaaagtaagctccaggacagccaggactacacaga
gaaaccctgtcttgaaaaaaaaaaaaaaaaaaaagctgtcatcaacggaa
aaaattcctgaaagtattgtaattttctcattttgtagtacttacgttat
gagaatacactataattaagtaatataagtgtataaatgtaatagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114158222_114159389
seq2: B6Ng01-344L08.g_65_1212

seq1  GAATTCAATAAAGTATGCAATGGTTCACAATTATTCTGTAACCCATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAGTATGCAATGGTTCACAATTATTCTGTAACCCATGTAT  50

seq1  CCTAATTAATATGACCCTACGTAGGAACCTCAATGCAGCAGACATTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTAATATGACCCTACGTAGGAACCTCAATGCAGCAGACATTCACA  100

seq1  AGTGGCACTCAAATTCCAGGGATCCCTGAAAAGGAAGATGTCAGGAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACTCAAATTCCAGGGATCCCTGAAAAGGAAGATGTCAGGAGGGT  150

seq1  GAGAATCTTTGGTAAAGAAACCTTATTAAAAACTGTGTTCCAAGGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTTTGGTAAAGAAACCTTATTAAAAACTGTGTTCCAAGGTTATT  200

seq1  TATCAAAAACGTTTTATAGGGAAACGGGACAAAGTAAATTTATTCATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAACGTTTTATAGGGAAACGGGACAAAGTAAATTTATTCATTAT  250

seq1  ATTTCATTTTTGCAGCATTTGCTTAAAACTCATTGCGCTTGAGTTAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTTGCAGCATTTGCTTAAAACTCATTGCGCTTGAGTTAACAC  300

seq1  CTTCCATCCAAATATGTTTATCTGTTTGTCTATATGTTTGTGTGTAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCCAAATATGTTTATCTGTTTGTCTATATGTTTGTGTGTAGGTA  350

seq1  TATATGTATATATGTAAACATGCATGAATATTTGTGGAGTTAATTGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATATATGTAAACATGCATGAATATTTGTGGAGTTAATTGTGAC  400

seq1  AGTAGGCCGGGCCCAGTCAGAGTGTGAGTGTATGAATATGTATATGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCCGGGCCCAGTCAGAGTGTGAGTGTATGAATATGTATATGTGCC  450

seq1  TGTAAATATTTGCCTGTATAAAGCATATTAATTCTTTTTTTTCCTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATTTGCCTGTATAAAGCATATTAATTCTTTTTTTTCCTTCAGA  500

seq1  GGAGCACCAGCAATAAATCCTTTCACTGAATTCGCTGCTGCTAAGCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACCAGCAATAAATCCTTTCACTGAATTCGCTGCTGCTAAGCAGTT  550

seq1  ATTTGTCATATATTAGTGCTTATTAAAGTATAAGTAATAAAGGGTTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCATATATTAGTGCTTATTAAAGTATAAGTAATAAAGGGTTAAGA  600

seq1  AAGAGTAAAGTTTCCCCAGTGCTTATTTAAGCATAGTTAAATAAAGTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAAGTTTCCCCAGTGCTTATTTAAGCATAGTTAAATAAAGTACC  650

seq1  AAGAGTTACAATGTTTAATAAGGAACATAGTTAAAGAAGATGCCAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTACAATGTTTAATAAGGAACATAGTTAAAGAAGATGCCAGTTTT  700

seq1  TTTTTAATAACCATAAAATAAAGAAAAAGGGTTTTAGAACATTTTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATAACCATAAAATAAAGAAAAAGGGTTTTAGAACATTTTAGAAG  750

seq1  TTATCAGCAACCATCGAGTATAATTAGAGTGCTAGAAGGCAAGAGAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGCAACCATCGAGTATAATTAGAGTGCTAGAAGGCAAGAGAGCAT  800

seq1  CAATCTATAAAACTAAGTCTGGAGACTAGATATTGAAAATTGGTAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATAAAACTAAGTCTGGAGACTAGATATTGAAAATTGGTAAAGGA  850

seq1  CAAAAAGTGATGTAAAAAGGCTGTTCATCCCTGGGCGGTGGTGGCTCACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTGATGTAAAAAGGCTGTTCATCCCTGGGCGGTGGTGGCTCACG  900

seq1  CCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTG  950

seq1  AGGCCAGCCTGGTCTACAAAGTAAGCTCCAGGACAGCCAGGACTACACAG  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GCCAGCCTGGTCTACAAAGTAAGCTCCAGGACAGCCAGGACTACACAG  999

seq1  AGAAACCCTGTCTTGAAAAAAAAAAAAAAAAAAAAAAGGCTGTTCATCAA  1050
      |||||||||||||||||||||||||||||||||||   |||| ||||| |
seq2  AGAAACCCTGTCTTGAAAAAAAAAAAAAAAAAAAA---GCTG-TCATC-A  1044

seq1  AGGGAGAAAATTCCTGGAAAGTATTGGTAAATTTTTCCTTCATTTATGTA  1100
      | ||| ||||||||| ||||||||| ||||  |||||  |||||| ||||
seq2  ACGGAAAAAATTCCT-GAAAGTATT-GTAA--TTTTC--TCATTT-TGTA  1087

seq1  GTACTAAAGGTTATGAGAAATACACTTAATATTTAAAGTAAAATAAGTGT  1150
      |||||  | |||||||| ||||||||  ||| || |||||| ||||||||
seq2  GTACT-TACGTTATGAG-AATACACT--ATAATT-AAGTAATATAAGTGT  1132

seq1  AATAAAATGTAATAGTCA  1168
      |   ||||||||||||||
seq2  A--TAAATGTAATAGTCA  1148


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