MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-344N08
Chromosome	1 (Build37)
Map Location	8,641,606 - 8,642,750
singlet/doublet	singlet
Overlap gene	Sntg1
Upstream gene	LOC665069, LOC100039408
Downstream gene	LOC100039474, LOC620444, EG665007, LOC665103, LOC100039464, EG620853, LOC665138, Rrs1, Adhfe1, LOC620542, 3110035E14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Sntg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins

name	LOC620444 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG665007 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665007 MGI:3644942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665103 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039464 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs

name	EG620853 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620853 MGI:3648954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC665138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Rrs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59014 MGI:1929721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adhfe1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76187 MGI:1923437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620542 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620542
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	3110035E14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76982 MGI:1924232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sntg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140971304 GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntrophin, gamma 1 transcript_id : NM_027671.4

name	LOC100039474 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233594 GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) transcript_id : XM_001472887.1

name	LOC100039464 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233592 GeneID:100039464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs product : similar to gag protein, transcript variant 2 transcript_id : XM_001472866.1

name	LOC100039464 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233590 GeneID:100039464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs product : similar to gag protein, transcript variant 1 transcript_id : XM_001472850.1

name	Rrs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946929 GeneID:59014 MGI:1929721
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) transcript_id : NM_021511.1

name	Adhfe1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370905 GeneID:76187 MGI:1923437
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alcohol dehydrogenase, iron containing, 1 transcript_id : NM_175236.3

name	3110035E14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377518 GeneID:76982 MGI:1924232
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110035E14 gene transcript_id : NM_178399.3

name	Sntg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560093 GeneID:71096 MGI:1918346
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : syntrophin, gamma 1 protein_id : NP_081947.2

name	LOC100039474 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233595 GeneID:100039474
definition	codon_start : 1 product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) protein_id : XP_001472937.1

name	LOC100039464 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233591 GeneID:100039464
definition	codon_start : 1 product : similar to gag protein isoform 1 protein_id : XP_001472900.1

name	LOC100039464 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233593 GeneID:100039464
definition	codon_start : 1 product : similar to gag protein isoform 2 protein_id : XP_001472916.1

name	Rrs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946930 CCDS:CCDS14811.1 GeneID:59014 MGI:1929721
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0042254 - ribosome biogenesis and assembly [Evidence IEA] codon_start : 1 exception : mismatches in translation note : regulator for ribosome resistance homolog product : RRS1 ribosome biogenesis regulator homolog protein_id : NP_067486.1

name	Adhfe1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424876 CCDS:CCDS14812.1 GeneID:76187 MGI:1923437
definition	GO_function : GO:0050093 - methanol dehydrogenase activity [Evidence IEA] codon_start : 1 note : alcohol dehydrogenase 8 product : Fe-containing alcohol dehydrogenase 1 protein_id : NP_780445.1

name	3110035E14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30409966 CCDS:CCDS14813.1 GeneID:76982 MGI:1924232
definition	codon_start : 1 product : hypothetical protein LOC76982 protein_id : NP_848486.1

name	LOC665069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665069
definition	number : 1 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 5 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 4 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 3 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 2 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 1 pseudo : _no_value

name	LOC620444 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620444
definition	number : 1 pseudo : _no_value

name	EG665007 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665007
definition	number : 1 pseudo : _no_value

name	EG620853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620853
definition	number : 3 pseudo : _no_value

name	EG620853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620853
definition	number : 2 pseudo : _no_value

name	EG620853 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620853
definition	number : 1 pseudo : _no_value

name	LOC665138 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665138
definition	number : 1 pseudo : _no_value

name	LOC665138 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665138
definition	number : 2 pseudo : _no_value

name	LOC665138 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665138
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:122890
definition	standard_name : 07.MMHAP53FLC1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:186238
definition	standard_name : M-11219

name	(CDS detail)
type	STS
link
xref	UniSTS:128924
definition	standard_name : D1Mit65

name	(CDS detail)
type	STS
link
xref	UniSTS:207122
definition	standard_name : BB175276

name	(CDS detail)
type	STS
link
xref	UniSTS:123774
definition	standard_name : 27.MMHAP17FA6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:164112
definition	standard_name : AI648812

name	(CDS detail)
type	STS
link
xref	UniSTS:167288
definition	standard_name : AU015916

name	(CDS detail)
type	STS
link
xref	UniSTS:158772
definition	standard_name : AA415037

name	(CDS detail)
type	STS
link
xref	UniSTS:158771
definition	standard_name : AI043035

name	(CDS detail)
type	STS
link
xref	UniSTS:164107
definition	standard_name : AV164974

name	(CDS detail)
type	STS
link
xref	UniSTS:185428
definition	standard_name : AI415019

name	(CDS detail)
type	STS
link
xref	UniSTS:161980
definition	standard_name : RH125158

name	(CDS detail)
type	STS
link
xref	UniSTS:124235
definition	standard_name : 37.MMHAP50FLE4.seq

name	LOC665103 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233596 GeneID:665103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 78 ESTs, 5 Proteins product : similar to Translocase of inner mitochondrial membrane 23 homolog (yeast) pseudo : _no_value transcript_id : XR_030934.1

clone name	MSMg01-234I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-045P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481P22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-276M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-344N08.b	B6Ng01-344N08.g
ACC	GA127217	GA127218
length	1,157	1,188
definition	B6Ng01-344N08.b	B6Ng01-344N08.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagtcccttaggcacagtcaaggacatgagctagttgtttattcg gcacccaaaaccttctgccctgtctgtgccctttctgtcctctcagtaga gcatccaaaattgcctttaccttttttatttccattaggagaagacatta gaagtcttttcttcggcaaaactaatctcagagaaatacccacaaatagt cctttgggctttccaccacatattgatttcccactaagaacaggactctg gaactcagctgtacataaactctatatcctgaaccccaactgtcaatctt tgcttcagcctcactcttaagtactccaaagatcattcacatttgaaaaa aaaaaaaaaaaaaaaaaaaaaaaaaacaaccacatcaatggcagagtctg aagcatatagagaaaaatagaagaactagtaaaagtaaaaaataataagt cattatcaaagacttatataagaaaagtccatggactttcaaacagaggc agtgccagataaaggaaaaatagaacaaagctttcctatagctctttctt ggcagacacatcacaatacaggtttacttcacctttctattctctgggac agctaagcatcttttgtgcttttgaaatttccccacatcgattgtgttaa ttgtgcggacttcccatttatttttaagaattggtttgtgtatgttgtgt acaattcagaattacaatttgtacattcacttcccccttctgtgactgta tctctattttcttaattgtatcctctgaagcttggtgattttgattgtta tgatatcctataattcgactatttctttctctctctcttttttgtttttg ttttgttttttgttttgttttgttttgttttttttgagacagggtttctc tgttattatccctggctgtcctggaactcactcttgtaagaccagggctg ggcctcaaacttcagaaattccaacttcctttggccacctcatttaataa aatattttttgaattgagtttccctcctccaatgacctctagccagtgtc tttataactagcttaggatactgtataaacatttaagctttacagtttga tatttcaaatggcttgttttgagtttaatggaacttcatcaactggattg gtccaac	gaattccagaagcaacacacagctaacaagctttactaagaaccagatag agagcagaaaccaaagaacaaagcacccatttaacaaagacaaaacagat ataggcttctagtttgacaatttttccaaacccagatacctagatgcagt aaaattataattaataatggccaggaaattatgtcatcactagagcccta ctataccaggccacaagtactgcaacaaagcagacacataaggaaagacc ataactgtcttagaaaatcttaaaaacatgaatgattatcatgatatata ccacttaccaaagttaaatcaagatcagataagcaatgtaaacagaccta taatccccagtgattagaagtctccaaaccaaccaaccaaccaaacaaac aaaaaacaaaccaaaacaaaccaaaaaacaaggaccacatagtttcagtg cagccttctaccagatattcaaagagttaaatataaatattcctcaagtt actgcacaaaattgaaacaaaaaaaatgtccaatttactttgtgaaattt catttactctgatactaaaaccaaataaaacctaacagaggaagagaatt acttacagacccatttctcttatggacatagatgtaaaaaattctagata aaatactttaaaaatcaagcccaagaatacatgaataaatcatccacctt gattaagtaagtttcatcccagagatgcagtgataattcaacatatgtaa atagataaatgtaatccaccatataaagaaatttaaagacaaaaaaatat gataatcttattaggtacagaacatgcttttgacaaaatccaatatctgt tcatgagaaagtccaagagagattaggaatacaagggacctacctcaaaa tggtaaagggtgattacagcaagctcatagccaatatcaacttaaatgga aagaaactcaaaacaattatactgatgtcagacagcaagattgtctaatc tctcatatgtagcaaaatagtacttgagtctcagctaaaatacagtattg aaggagatccacgtggctttatttggattgatatccatagtatattattt atatcttaagaacctggtacttaatactatcaaacttctgcaagtgcctg gtaaaaactaatggtctaaaaaatcaatagctctctct
quality values	Open. Hide. 62 47 34 44 62 59 27 46 59 62 62 59 62 59 62 59 62 59 59 62 59 62 62 59 51 59 62 62 59 62 62 59 62 54 49 54 59 59 62 54 62 62 62 62 59 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 59 54 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 24 24 24 13 41 32 24 43 39 24 35 18 34 27 23 18 27 45 34 19 19 19 43 19 40 41 41 46 48 43 34 34 30 40 30 34 30 23 36 34 51 51 49 56 46 49 43 30 41 30 18 48 30 30 43 24 36 38 56 56 59 50 45 45 50 46 56 56 56 50 45 50 36 45 50 45 34 39 36 34 45 43 39 43 39 41 34 34 23 34 30 39 39 34 39 34 41 24 30 22 38 27 31 51 42 38 31 31 22 31 50 31 28 37 56 56 38 51 39 50 56 34 24 23 51 42 56 50 25 27 22 51 42 31 18 20 51 32 33 51 32 38 38 47 38 56 56 43 43 38 24 56 43 46 50 56 50 38 43 56 56 36 43 38 38 38 39 31 24 25 34 42 52 50 27 34 33 24 40 27 20 27 19 43 28 27 50 31 47 46 46 52 52 42 50 47 47 34 52 48 47 50 37 37 47 50 46 50 30 47 52 52 52 52 50 46 50 49 46 42 37 43 33 52 50 28 22 34 25 19 32 26 28 27 12 34 22 28 46 37 47 47 27 33 19 34 32 33 52 42 35 35 47 42 34 40 31 27 46 37 47 38 33 53 41 50 47 17 29 35 33 50 28 53 52 39 41 37 40 41 48 31 50 40 42 37 43 40 50 39 46 42 42 40 49 50 46 37 50 58 58 54 37 50 52 22 58 23 39 39 58 31 41 53 40 49 30 50 39 39 52 50 41 39 50 31 51 37 32 39 50 38 46 29 37 29 13 58 32 40 43 23 41 37 39 52 44 44 53 42 32 39 26 51 38 42 29 45 50 37 40 54 54 54 47 51 32 40 32 51 37 42 43 34 35 49 24 27 37 52 40 53 32 33 54 54 54 42 52 49 27 37 27 44 31 43 21 37 35 53 41 34 41 27 33 39 32 33 45 46 17 53 45 24 31 39 23 52 52 33 32 40 25 22 37 24 32 40 31 39 45 30 32 32 45 53 31 31 23 38 37 31 26 38 35 33 30 9 36 34 51 21 46 33 46 18 46 6 46 23 48 10 51 16 51 32 51 45 45 37 19 23 9 46 46 46 22 46 18 37 36 9 7 19 37 29 41 41 18 12 13 43 41 17 46 12 46 41 17 12 10 41 31 11 32 12 38 41 31 39 41 43 24 17 18 9 10 8 5 24 44 44 30 46 23 31 17 27 25 11 7 11 10 6 10 9 21 33 48 25 11 22 21 21 25 37 23 23 31 26 33 26 25 25 32 21 15 21 32 29 16 7 12 11 18 24 9 9 33 27 16 21 17 29 9 13 34 24 42 13 23 7 22 14 23 17 23 19 12 15 19 22 10 29 48 31 7 10 21 34 13 11 18 10 16 12 34 26 48 33 11 18 32 21 22 9 9 22 14 18 30 34 19 9 9 16 10 48 36 6 12 10 18 34 32 40 40 20 6 15 21 19 25 25 27 13 16 47 15 18 34 27 13 27 21 24 28 12 4 5 3 7 11 10 6 6 8 6 10 14 11 7 24 18 8 27 8 11 6 28 14 23 13 11 15 4 7 20 7 7 10 17 13 19 11 10 9 20 7 3 3 1 3 6 4 26 8 6 3 9 23 14 5 8 4 6 8 25 11 9 11 5 8 3 19 10 13 6 4 12 17 23 21 13 15 22 22 8 12 15 15 7 9 21 7 23 28 18 11 12 4 14 17 8 14 14 4 14 17 9 5 8 6 12 8 6 6 6 6 13 3 5 17 7 6 4 13 10 9 1 6 19 16 7 5	Open. Hide. 62 59 56 59 62 62 59 43 59 62 62 59 62 59 59 62 59 62 59 62 59 62 62 59 62 62 59 62 62 62 62 62 49 54 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 62 62 56 62 54 54 62 62 59 62 54 49 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 59 62 62 62 62 62 62 59 50 62 54 54 62 49 62 62 62 62 62 62 54 59 59 54 49 49 54 62 62 59 62 62 62 49 49 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 42 58 58 58 58 58 58 58 58 58 54 50 54 58 54 47 58 58 58 54 58 48 58 58 58 58 58 58 58 49 58 58 58 58 58 54 58 58 43 58 58 58 48 58 52 58 51 41 58 51 54 58 58 51 58 54 58 49 37 58 45 40 58 58 58 58 51 58 58 49 51 58 58 58 58 52 51 58 51 58 54 53 58 50 50 58 58 58 58 53 42 58 51 54 58 51 53 50 52 58 58 50 51 51 49 53 58 51 53 58 58 58 37 49 53 52 58 53 39 58 46 52 51 42 58 53 50 52 53 53 58 58 58 51 53 50 58 58 44 49 42 53 53 47 37 51 54 52 38 54 47 29 41 51 52 42 42 52 54 49 53 54 53 53 34 42 43 54 51 45 45 54 30 39 31 52 40 38 53 42 54 31 33 43 34 37 51 52 40 41 53 42 52 45 52 54 40 51 54 54 41 53 52 39 33 33 54 34 41 54 29 33 33 32 51 40 32 45 53 36 53 34 45 40 53 52 41 40 52 53 34 53 45 53 51 34 45 31 30 33 52 52 49 49 49 45 33 31 42 45 43 31 38 42 35 31 51 21 30 39 38 43 31 33 19 27 31 32 34 41 32 25 30 37 43 31 41 46 51 30 30 31 26 31 48 46 28 31 28 10 8 41 24 31 38 43 31 42 9 31 27 23 31 31 31 24 42 46 32 19 24 32 31 18 33 16 38 15 31 26 15 12 30 24 32 27 29 31 30 24 21 19 10 31 46 15 18 17 30 18 31 30 31 31 22 18 48 46 30 23 36 43 27 31 48 38 20 47 31 20 42 34 23 31 24 32 25 36 34 32 31 37 32 33 34 26 32 27 21 25 31 21 13 27 31 38 38 23 19 31 26 29 12 41 16 14 21 26 18 48 22 21 34 39 16 19 24 23 16 34 39 30 23 10 10 26 7 11 17 16 32 17 21 20 25 32 21 28 21 12 43 20 4 4 7 22 17 23 30 24 17 22 9 15 17 16 23 18 18 24 27 16 30 7 14 19 17 28 24 28 28 20 27 38 38 24 6 6 20 13 26 20 11 21 11 21 9 23 13 6 14 18 13 27 27 24 47 40 6 7 26 14 13 7 6 24 6 9 23 10 14 16 8 18 8 18 8 8 4 4 12 16 5 17 15 8 15 25 12 16 9 26 15 8 15 5 3 5 6 8 7 5 17 6 10 5 11 20 13 7 6 4 4 10 8 8 10 26 11 13 3 5 7 15 4 5 27 20 6 8 24 5 9 8 22 5 1 3 3 4 3 3 4 8 5 27 5 2 2 3 7 26 7 5 3 4 9 4 8 8 7 5 13 5 4 4 5 10 8 3 3 4 5 14 25 4 2 3 4 21 10 5 12 1 1 2 13 12 17 17 12 6 15 12 8 5 5 7 3 1 7 8 16 4 9 4 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_8641606_8642750
seq2: B6Ng01-344N08.b_53_1209 (reverse)

seq1  GTTGGACCAATCAGTTTGATGAAGTCTCCATTAAACTCAAAAC-AGCCAT  49
      ||||||||||||   |||||||||| ||||||||||||||||| ||||| 
seq2  GTTGGACCAATCCAGTTGATGAAGT-TCCATTAAACTCAAAACAAGCCA-  48

seq1  TTTGAAATATCAAACTGT-AAGCTT-AATGTTTATACAGTATCCT-AGCT  96
      |||||||||||||||||| |||||| ||||||||||||||||||| ||||
seq2  TTTGAAATATCAAACTGTAAAGCTTAAATGTTTATACAGTATCCTAAGCT  98

seq1  AGTTTATAAGACACTTGCTAGA-GTCATTTTGGAGGAGGGAAACTCAATT  145
      ||||   |||||||| |||||| ||||  |||||||||||||||||||||
seq2  AGTTATAAAGACACTGGCTAGAGGTCA--TTGGAGGAGGGAAACTCAATT  146

seq1  CAAAAAATATTT--ATAAATGA-GTGG-CAAAGGAAGGTGG-ATTTCTG-  189
      ||||||||||||   ||||||| |||| ||||||||| ||| ||||||| 
seq2  CAAAAAATATTTTATTAAATGAGGTGGCCAAAGGAAGTTGGAATTTCTGA  196

seq1  AGTTTGAGG-CCAG-CCTGGTC-TAC-AGAGTGAGTTCCAGGACAGCCAG  235
      ||||||||| |||| ||||||| ||| |||||||||||||||||||||||
seq2  AGTTTGAGGCCCAGCCCTGGTCTTACAAGAGTGAGTTCCAGGACAGCCAG  246

seq1  GGATA--TACAGAGAAACCCTGTCTCAAAAAAAACAAAACAAAACAAAAC  283
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATAACAGAGAAACCCTGTCTCAAAAAAAACAAAACAAAACAAAAC  296

seq1  AAAAAACAAAAACAAAAACAAAAAAGAGAGAGAGAAAGAAATAGTCGAAT  333
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAC-AAAACAAAAACAAAAAAGAGAGAGAGAAAGAAATAGTCGAAT  345

seq1  TATAGGATATCATAACAATCAAAATCACCAAGCTTCAGAGGATACAATTA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATATCATAACAATCAAAATCACCAAGCTTCAGAGGATACAATTA  395

seq1  AGAAAATAGAGATACAGTCACAGAAGGGGGAAGTGAATGTACAAATTGTA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAGAGATACAGTCACAGAAGGGGGAAGTGAATGTACAAATTGTA  445

seq1  ATTCTGAATTGTACACAACATACACAAACCAATTCTTAAAAATAAATGGG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAATTGTACACAACATACACAAACCAATTCTTAAAAATAAATGGG  495

seq1  AAGTCCGCACAATTAACACAATCGATGTGGGGAAATTTCAAAAGCACAAA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCGCACAATTAACACAATCGATGTGGGGAAATTTCAAAAGCACAAA  545

seq1  AGATGCTTAGCTGTCCCAGAGAATAGAAAGGTGAAGTAAACCTGTATTGT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTAGCTGTCCCAGAGAATAGAAAGGTGAAGTAAACCTGTATTGT  595

seq1  GATGTGTCTGCCAAGAAAGAGCTATAGGAAAGCTTTGTTCTATTTTTCCT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTCTGCCAAGAAAGAGCTATAGGAAAGCTTTGTTCTATTTTTCCT  645

seq1  TTATCTGGCACTGCCTCTGTTTGAAAGTCCATGGACTTTTCTTATATAAG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGCACTGCCTCTGTTTGAAAGTCCATGGACTTTTCTTATATAAG  695

seq1  TCTTTGATAATGACTTATTATTTTTTACTTTTACTAGTTCTTCTATTTTT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATAATGACTTATTATTTTTTACTTTTACTAGTTCTTCTATTTTT  745

seq1  CTCTATATGCTTCAGACTCTGCCATTGATGTGGTTGTTTTTTTTTTTTTT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATATGCTTCAGACTCTGCCATTGATGTGGTTGTTTTTTTTTTTTTT  795

seq1  TTTTTTTTTTTTTTTTTCAAATGTGAATGATCTTTGGAGTACTTAAGAGT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTCAAATGTGAATGATCTTTGGAGTACTTAAGAGT  845

seq1  GAGGCTGAAGCAAAGATTGACAGTTGGGGTTCAGGATATAGAGTTTATGT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAAGCAAAGATTGACAGTTGGGGTTCAGGATATAGAGTTTATGT  895

seq1  ACAGCTGAGTTCCAGAGTCCTGTTCTTAGTGGGAAATCAATATGTGGTGG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGAGTTCCAGAGTCCTGTTCTTAGTGGGAAATCAATATGTGGTGG  945

seq1  AAAGCCCAAAGGACTATTTGTGGGTATTTCTCTGAGATTAGTTTTGCCGA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAAAGGACTATTTGTGGGTATTTCTCTGAGATTAGTTTTGCCGA  995

seq1  AGAAAAGACTTCTAATGTCTTCTCCTAATGGAAATAAAAAAGGTAAAGGC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACTTCTAATGTCTTCTCCTAATGGAAATAAAAAAGGTAAAGGC  1045

seq1  AATTTTGGATGCTCTACTGAGAGGACAGAAAGGGCACAGACAGGGCAGAA  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGATGCTCTACTGAGAGGACAGAAAGGGCACAGACAGGGCAGAA  1095

seq1  GGTTTTGGGTGCCGAATAAACAACTAGCTCATGTCCTTGACTGTGCCTAA  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGGTGCCGAATAAACAACTAGCTCATGTCCTTGACTGTGCCTAA  1145

seq1  GGGACTGAATTC  1145
      ||||||||||||
seq2  GGGACTGAATTC  1157

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information