BAC Information

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BAC

Clone NameB6Ng01-344P02
Chromosome1 (Build37)
Map Location 103,344,187 - 103,345,306
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344P02.bB6Ng01-344P02.g
ACCGA127297GA127298
length1,1261,043
definitionB6Ng01-344P02.b B6Ng01-344P02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggagatttttctaatagtactattgatacaaaggaagctgt
ctcactttaaaccggtctgaaaggctctggtggccatggcaaaggtgtta
caactcaggaaacctgcagtcctgggactctcagaagaacatggaggcag
ctttactggtctgagtcccatctcttagcagctctgctggtcagaccttt
cctacagtgtttgcagcttccataatgttggaaagtaaaccagagaatca
ataggtttaaattttctcagatattggaagtgtctctacttcctgagcct
caaggccctccacctcctttctggaggcactgtttcattctgtggaaaaa
tgctgagcaacatatataccatttcttcttataccttccaaataattttt
ttcctaattccttcaaatctgaccccctgtttttctagactatatgtgct
gacatttaattcctgaaatatatgtaaacagcatttcaaaattgctactc
tagcaaaattgctgtcaatttttccactctcatgaattttattttgctat
agtatagaacattaacctgatagtattttcatacagacattactaatgat
atttactttttttgtggtgccaattttatcctttaatcaatctcaaacag
ttgtcctgaattcttttttttaatattttttattacatattttcctcaat
tacatttccaatgctatcccaaaagtcccccataccttcccccccacttc
cctacccacccattcccattttttttggccctggcgttcccctgtactgg
ggcatatacagtttgcgtgtccaatgggcctctctttccagtgatggccg
actaggccatcttttgatacatatgcagctagagtcaagagctccggggt
actggttagttcataattgttgttccacctatagggttgcagatcccttt
agctccttggctactttctctagctcctccattgggagccctgtgatcca
tccattagcctgactgtgagcattccacttctgtgtttgctagggccccg
gcataagtcctcacaagagaacagctacatctggatcttcgaataaatct
tgctaggtatgccaatggtgtcagcg

gaattcatcaggaatcttagtattagggtgcatgcctcaactgaagccaa
cccattgtggctatattaaccagaggactgcattccatgagttttaaagc
catgcatttttcttcctgcatggttcttggcactcattattaatatatca
gcctgactgaattgttttgagtaggacttatagatatacactgaaaatgt
aggtgtgtgtggtttgcctgcctgtggaggccagaggtgtcttcttcaat
ttcttctttatcttagttatatatttatatgttccttcattaattttatt
caggttttttttttagaaagacctagagctcacttagcatggctccaatg
tagagccaaaaacagaactagggatcctcctgtcctcctgacactgctcc
tccagccttggtattataaacccgtaaccctgtgtctggctttttatatg
ggtgttagatgtcacgcaggcatttattttgaacaaaacacatattcttc
ttctctttctttctttctttctttcttttttttttctttttttttttttt
ttttttttttgcttcaaggtgtttattgtagaaaggcagagagaaagaga
agagtagagaaacagagggtggccatggccatgtggagagaaggagaaag
ggaggggagaggggagcaagaaggctagagagaaagcaagagaggcaaga
accaaaacacatattcttttttttttttttttttttttatctagaaataa
cttttttttattaggtatttttcctcatttacattttccaatgctatcca
aaaagtccccaatacactcaacccccacctccttacccacccactcccac
tttttggccctgggcgttcctctgtgactggggcataataaaggttgcaa
gtacaatgggccctctctttccagggaatggcgactaggcatcttttgat
aacatatggccagctaagagtcaagagctctggtactggttaggtccata
tcgtggttccaccttatagggttgccgagattccttttagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103344187_103345306
seq2: B6Ng01-344P02.b_46_1171

seq1  GAATTCTTTGGAGATTTTTCTAATAGTACTATTGATACAAAGGAAGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGAGATTTTTCTAATAGTACTATTGATACAAAGGAAGCTGT  50

seq1  CTCACTTTAAACCGGTCTGAAAGGCTCTGGTGGCCATGGCAAAGGTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTAAACCGGTCTGAAAGGCTCTGGTGGCCATGGCAAAGGTGTTA  100

seq1  CAACTCAGGAAACCTGCAGTCCTGGGACTCTCAGAAGAACATGGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGGAAACCTGCAGTCCTGGGACTCTCAGAAGAACATGGAGGCAG  150

seq1  CTTTACTGGTCTGAGTCCCATCTCTTAGCAGCTCTGCTGGTCAGACCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTGGTCTGAGTCCCATCTCTTAGCAGCTCTGCTGGTCAGACCTTT  200

seq1  CCTACAGTGTTTGCAGCTTCCATAATGTTGGAAAGTAAACCAGAGAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGTGTTTGCAGCTTCCATAATGTTGGAAAGTAAACCAGAGAATCA  250

seq1  ATAGGTTTAAATTTTCTCAGATATTGGAAGTGTCTCTACTTCCTGAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTTAAATTTTCTCAGATATTGGAAGTGTCTCTACTTCCTGAGCCT  300

seq1  CAAGGCCCTCCACCTCCTTTCTGGAGGCACTGTTTCATTCTGTGGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCCTCCACCTCCTTTCTGGAGGCACTGTTTCATTCTGTGGAAAAA  350

seq1  TGCTGAGCAACATATATACCATTTCTTCTTATACCTTCCAAATAATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCAACATATATACCATTTCTTCTTATACCTTCCAAATAATTTTT  400

seq1  TTCCTAATTCCTTCAAATCTGACCCCCTGTTTTTCTAGACTATATGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATTCCTTCAAATCTGACCCCCTGTTTTTCTAGACTATATGTGCT  450

seq1  GACATTTAATTCCTGAAATATATGTAAACAGCATTTCAAAATTGCTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAATTCCTGAAATATATGTAAACAGCATTTCAAAATTGCTACTC  500

seq1  TAGCAAAATTGCTGTCAATTTTTCCACTCTCATGAATTTTATTTTGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAATTGCTGTCAATTTTTCCACTCTCATGAATTTTATTTTGCTAT  550

seq1  AGTATAGAACATTAACCTGATAGTATTTTCATACAGACATTACTAATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAACATTAACCTGATAGTATTTTCATACAGACATTACTAATGAT  600

seq1  ATTTACTTTTTTTGTGGTGCCAATTTTATCCTTTAATCAATCTCAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTTTTTGTGGTGCCAATTTTATCCTTTAATCAATCTCAAACAG  650

seq1  TTGTCCTGAATTCTTTTTTTTAATATTTTTTATTACATATTTTCCTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGAATTCTTTTTTTTAATATTTTTTATTACATATTTTCCTCAAT  700

seq1  TACATTTCCAATGCTATCCCAAAAGTCCCCCATACCTTCCCCCCCACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCAATGCTATCCCAAAAGTCCCCCATACCTTCCCCCCCACTTC  750

seq1  CCTACCCACCCATTCCCA-TTTTTTTGGCCCTGGCGTTCCCCTGTACTGG  799
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTACCCACCCATTCCCATTTTTTTTGGCCCTGGCGTTCCCCTGTACTGG  800

seq1  GGCATATACAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATACAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  850

seq1  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGT  900

seq1  ACTGGTTAGTTCATAA-TGTTGTTCCACCTATAGGGTTGCAGATCCCTTT  948
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTTCATAATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTT  950

seq1  AGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCA  1000

seq1  TCCATTAG-CTGACTGTGAGCA-TCCACTTCTGTGTTTGCTA-GGCCCCG  1045
      |||||||| ||||||||||||| ||||||||||||||||||| |||||||
seq2  TCCATTAGCCTGACTGTGAGCATTCCACTTCTGTGTTTGCTAGGGCCCCG  1050

seq1  GCAT-AGT-CTCACAAGAG-ACAGCTACATCTGGGTCCTTTCGATAAAAT  1092
      |||| ||| |||||||||| |||||||||||||| ||  |||||  ||||
seq2  GCATAAGTCCTCACAAGAGAACAGCTACATCTGGATC--TTCGAATAAAT  1098

seq1  CTTGCTAGTGTATG-CAATGGTGTCAGCG  1120
      |||||||| ||||| ||||||||||||||
seq2  CTTGCTAG-GTATGCCAATGGTGTCAGCG  1126


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