BAC Information

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BAC

Clone NameB6Ng01-346B04
Chromosome1 (Build37)
Map Location 80,460,918 - 80,567,836
singlet/doubletdoublet
Overlap gene1700016L21Rik, Dock10
Upstream geneAp1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899
Downstream geneLOC665092, 9430031J16Rik, EG621020
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346B04.bB6Ng01-346B04.g
ACCGA128079GA128080
length9921,147
definitionB6Ng01-346B04.b B6Ng01-346B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,567,272 - 80,567,836)(80,460,918 - 80,462,078)
sequence
gaattccttgatcaatgctgtaacaaatagcatccattagttgcttaata
cagtgcataccatttacagctccatggtcagagatttgaattggctgtca
tatgagcatcactgaggcagtgtgtcttctaaaatttcttttttttttta
atttttttttattttttattttttttaattcttttacagatttatttctt
ttccattttttattaggtatttagctcatttacatttccaatgctatacc
aaaagtcccccatagccacccacccccactcccctacccacccactcccc
ctttttggccctggcattcccctgtactggggcatataaagtttgcgtgt
ccaatgggcctctctttccagtgatgggcgactaggccatcttttgatac
atatgcagctagagtcaagagctccggggtactggttagttcataatgtt
gttccacctatagggttgcagatccctttagctccttgggtactttctct
agctactccattgggagccctgtgatccatccattagctgactgtgagca
tccacttctgtgtttgctaggccccggcatagtctcacaagagacatcta
catctgggtcctttcgataaaatcttgctagtgtttcttctaaaataagg
aagatctgtttccttacctcttgcagcctctaaacatcacctagcacctt
ggcctgtaactccgttcctgccccatgctgggaccggaaatgttgatgga
gtattcccctcacttatgttaagccctaaatcctattcctagcaccacat
acaactaggtgtagtgatcacagtccttgggaagtagaggtaggagaatc
ataaatttaagataaatctttgttatctagagactttggggccaggatga
ggtaccttttataaaaggtgggatccactataaaaggagagagagaagaa
agaagaagaaagaaagaatgacgatgtatgaagaagaaagaa
gaattctaagtttctggactaatatccacttatcagtgagggcatatcat
gtgtgttcttttgtgattatgaaattcttgttggagcacagtggtgctca
tcttgtgggtcacgtcctctttggggctgaatgactctttcacaggggtc
acctaagaccatcaaaaaccacagatatttgcattacaattcataacagt
agaaaaattacagttatgaagtaacaaaaaaaattttgggtggtggtggt
taccacaacatgaggaattgtattgacagattgcagtattaggaagttaa
gaatcactgctctagcaggttgaaatgagtctctattctccagaactaac
atctcctacatccttgactgtttgttgtctaatgtagtttcaagggtttt
gagtgcactgtagactctctttttaagtacactatatagcaataggcttc
ctgacttaggctatccagctgtaaagccatccttttgaaggtttctgttc
tagcacttgaattgtcttatagaaaatattctacacaagtgggtagtaaa
aatcagtcttaaaatcatattcagtattgcaattatatttctctcttaca
attgttttcagcaatgacacaggacacaaaataatatataactgttggaa
attataagagagttatagttatagacaatttgattatatttctagagacc
agaggaaatgcatccaaaattctattttgctacagaataaatactttaaa
atagtcagtagtttttctaagcactaccagtaactatgaaggaaaaattt
ggaaagtgttcctatgacaagaatttttcaaatgtaaaatgcacaaagat
tttttttaaaaaatagagtttgatgtttttgtaatgaagaaaatgctagc
gttttactgagacatacaaagaacataaagaaaaaaatggtaactgttcc
tggcaaagagactgtatattttaaatatttatacatttcatgatagccca
atgagaatctcagtgggactgaagatgcaaaatcattctaaagatcatct
ggagacatcatatgcacatctgataacctgaatagtgagtttatttctac
agactattctagttgaattttgaactaatacaaagctatgatgcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80567272_80567836
seq2: B6Ng01-346B04.b_462_1041 (reverse)

seq1  TTCTTTCTT------------TCTTTCTTTCTTTCT--TTCTTTC-TCTC  35
      |||||||||            || ||||||||||||  ||||||| ||||
seq2  TTCTTTCTTCTTCATACATCGTCATTCTTTCTTTCTTCTTCTTTCTTCTC  50

seq1  TCTTCCTTTTTATAGTGGATCCCACCTTTTTATAAAGGTACCTCATCCTG  85
      |||  | |||||||||||||||||||||||   |||||||||||||||||
seq2  TCTCTCCTTTTATAGTGGATCCCACCTTTTATAAAAGGTACCTCATCCTG  100

seq1  GCCCCAAAGTCTCTAGATAACAAAGATTTATCTTAAATTTATGATTCTCC  135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAAGTCTCTAGATAACAAAGATTTATCTTAAATTTATGATTCTCC  150

seq1  TACCTCTACTTCCCAAGGACTGTGATCACTACACCTAGTTGTATGTGGTG  185
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTACTTCCCAAGGACTGTGATCACTACACCTAGTTGTATGTGGTG  200

seq1  CTAGGAATAGGATTTAGGGCTTAACATAAGTGAGGGGAATACTCCATCAA  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATAGGATTTAGGGCTTAACATAAGTGAGGGGAATACTCCATCAA  250

seq1  CATTTCCGGTCCCAGCATGGGGCAGGAACGGAGTTACAGGCCAAGGTGCT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCGGTCCCAGCATGGGGCAGGAACGGAGTTACAGGCCAAGGTGCT  300

seq1  AGGTGATGTTTAGAGGCTGCAAGAGGTAAGGAAACAGATCTTCCTTATTT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATGTTTAGAGGCTGCAAGAGGTAAGGAAACAGATCTTCCTTATTT  350

seq1  TAGAAGAAACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGATGTC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGATGTC  400

seq1  TCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  450

seq1  GTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGTAGCTAGAGAAAG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGTAGCTAGAGAAAG  500

seq1  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  550

seq1  GAACTAACCAGTACCCCGGAGCTCTTGACT  565
      ||||||||||||||||||||||||||||||
seq2  GAACTAACCAGTACCCCGGAGCTCTTGACT  580

seq1: chr1_80460918_80462078
seq2: B6Ng01-346B04.g_69_1215

seq1  GAATTCTAAGTTTCTGGACTAATATCCACTTATCAGTGAGGGCATATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTTCTGGACTAATATCCACTTATCAGTGAGGGCATATCAT  50

seq1  GTGTGTTCTTTTGTGATTATGAAATTCTTGTTGGAGCACAGTGGTGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCTTTTGTGATTATGAAATTCTTGTTGGAGCACAGTGGTGCTCA  100

seq1  TCTTGTGGGTCACGTCCTCTTTGGGGCTGAATGACTCTTTCACAGGGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGGTCACGTCCTCTTTGGGGCTGAATGACTCTTTCACAGGGGTC  150

seq1  ACCTAAGACCATCAAAAACCACAGATATTTGCATTACAATTCATAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGACCATCAAAAACCACAGATATTTGCATTACAATTCATAACAGT  200

seq1  AGAAAAATTACAGTTATGAAGTAACAAAAAAAATTTTGGGTGGTGGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTACAGTTATGAAGTAACAAAAAAAATTTTGGGTGGTGGTGGT  250

seq1  TACCACAACATGAGGAATTGTATTGACAGATTGCAGTATTAGGAAGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAACATGAGGAATTGTATTGACAGATTGCAGTATTAGGAAGTTAA  300

seq1  GAATCACTGCTCTAGCAGGTTGAAATGAGTCTCTATTCTCCAGAACTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACTGCTCTAGCAGGTTGAAATGAGTCTCTATTCTCCAGAACTAAC  350

seq1  ATCTCCTACATCCTTGACTGTTTGTTGTCTAATGTAGTTTCAAGGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTACATCCTTGACTGTTTGTTGTCTAATGTAGTTTCAAGGGTTTT  400

seq1  GAGTGCACTGTAGACTCTCTTTTTAAGTACACTATATAGCAATAGGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCACTGTAGACTCTCTTTTTAAGTACACTATATAGCAATAGGCTTC  450

seq1  CTGACTTAGGCTATCCAGCTGTAAAGCCATCCTTTTGAAGGTTTCTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTAGGCTATCCAGCTGTAAAGCCATCCTTTTGAAGGTTTCTGTTC  500

seq1  TAGCACTTGAATTGTCTTATAGAAAATATTCTACACAAGTGGGTAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTTGAATTGTCTTATAGAAAATATTCTACACAAGTGGGTAGTAAA  550

seq1  AATCAGTCTTAAAATCATATTCAGTATTGCAATTATATTTCTCTCTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCTTAAAATCATATTCAGTATTGCAATTATATTTCTCTCTTACA  600

seq1  ATTGTTTTCAGCAATGACACAGGACACAAAATAATATATAACTGTTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTCAGCAATGACACAGGACACAAAATAATATATAACTGTTGGAA  650

seq1  ATTATAAGAGAGTTATAGTTATAGACAATTTGATTATATTTCTAGAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGAGAGTTATAGTTATAGACAATTTGATTATATTTCTAGAGACC  700

seq1  AGAGGAAATGCATCCAAAATTCTATTTTGCTACAGAATAAATACTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATGCATCCAAAATTCTATTTTGCTACAGAATAAATACTTTAAA  750

seq1  ATAGTCAGTAGTTTTTCTAAGCACTACCAGTAACTATGAAGGAAAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAGTAGTTTTTCTAAGCACTACCAGTAACTATGAAGGAAAAATTT  800

seq1  GGAAAGTGTTCCTATGACAAGAATTTTTCAAATGTAAAATGCACAAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGTTCCTATGACAAGAATTTTTCAAATGTAAAATGCACAAAGAT  850

seq1  TTTTTTTAAAAAATAGAGTTTGATGTTTTTGTAATGAAGAAAATGCTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAAATAGAGTTTGATGTTTTTGTAATGAAGAAAATGCTAGC  900

seq1  GTTTTACTGAGACATACAAAAGAACATAAAGAAAAAAATGGTAACTGTTC  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTTTACTGAGACATAC-AAAGAACATAAAGAAAAAAATGGTAACTGTTC  949

seq1  CTGGCAAAGAAGACTGTATATTTTAAATAATTTATACATTTCATGATAGC  1000
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  CTGGCAAAG-AGACTGTATATTTTAAAT-ATTTATACATTTCATGATAGC  997

seq1  CCAATGAGAATCTCAGTGGGACTTGAAAGATTGGCAAAATCATTCTAAAG  1050
      |||||||||||||||||||||||   |||||  |||||||||||||||||
seq2  CCAATGAGAATCTCAGTGGGACT--GAAGAT--GCAAAATCATTCTAAAG  1043

seq1  ATCATCTGGAGACAATCATTATGCAACATCTGATAACCTG-ATAGTGAAG  1099
      ||||||||||||| |||| ||||| ||||||||||||||| |||||||  
seq2  ATCATCTGGAGAC-ATCA-TATGC-ACATCTGATAACCTGAATAGTGA--  1088

seq1  GTTTATTTCTACAGACTTATCTAGTGAGATTTTTGAACATAATACAAAGC  1149
      |||||||||||||||||  ||||||  || |||||||| |||||||||||
seq2  GTTTATTTCTACAGACTATTCTAGT-TGAATTTTGAAC-TAATACAAAGC  1136

seq1  TATGATGACAAT  1161
      ||||||| ||||
seq2  TATGATG-CAAT  1147