MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-346L07
Chromosome	1 (Build37)
Map Location	122,950,023 - 123,077,141
singlet/doublet	doublet
Overlap gene	AI848258
Upstream gene	Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3, C1ql2, Marco, En1
Downstream gene	Insig2, Ccdc93, LOC100041926, Htr5b, LOC666656, Ddx18
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sctr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319229 MGI:2441720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170706 MGI:2157899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13167 MGI:94865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	3110009E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73103 MGI:1920353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Steap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68428 MGI:1915678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1ql2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226359 MGI:3032521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Marco (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17167 MGI:1309998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	En1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13798 MGI:95389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI848258 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98452 MGI:2138347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Insig2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72999 MGI:1920249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ccdc93 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70829 MGI:1918079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100041926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	Htr5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15564 MGI:96284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Ddx18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66942 MGI:1914192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sctr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60685208 GeneID:319229 MGI:2441720
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretin receptor transcript_id : NM_001012322.1

name	Tmem37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980888 GeneID:170706 MGI:2157899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 37 transcript_id : NM_019432.2

name	Dbi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921597 GeneID:13167 MGI:94865
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diazepam binding inhibitor transcript_id : NM_007830.3

name	Dbi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921594 GeneID:13167 MGI:94865
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diazepam binding inhibitor transcript_id : NM_001037999.1

name	3110009E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930446 GeneID:73103 MGI:1920353
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110009E18 gene transcript_id : NM_028439.1

name	Steap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803084 GeneID:68428 MGI:1915678
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STEAP family member 3 transcript_id : NM_133186.2

name	C1ql2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402220 GeneID:226359 MGI:3032521
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, q subcomponent-like 2 transcript_id : NM_207233.1

name	Marco (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130131 GeneID:17167 MGI:1309998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : macrophage receptor with collagenous structure transcript_id : NM_010766.2

name	En1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106304 GeneID:13798 MGI:95389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : engrailed 1 transcript_id : NM_010133.1

name	AI848258 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363928 GeneID:98452 MGI:2138347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : expressed sequence AI848258 transcript_id : XM_895892.2

name	Insig2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526953 GeneID:72999 MGI:1920249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 2 transcript_id : NM_133748.1

name	Insig2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342571 GeneID:72999 MGI:1920249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin induced gene 2 transcript_id : NM_178082.2

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68448541 GeneID:70829 MGI:1918079
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_001025156.1

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352460 GeneID:70829 MGI:1918079
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_027567.2

name	Ccdc93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371535 GeneID:70829 MGI:1918079
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 93 transcript_id : NM_029955.2

name	LOC100041926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234241 GeneID:100041926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to low molecular mass ubiquinone-binding protein transcript_id : XM_001477223.1

name	Htr5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475921 GeneID:15564 MGI:96284
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 5B transcript_id : NM_010483.2

name	Ddx18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981162 GeneID:66942 MGI:1914192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 transcript_id : NM_025860.2

name	Sctr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60685209 GeneID:319229 MGI:2441720
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : secretin receptor protein_id : NP_001012322.1

name	Tmem37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506457 CCDS:CCDS15229.1 GeneID:170706 MGI:2157899
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : voltage-dependent calcium channel gamma subunit-like protein product : protein distantly related to to the gamma subunit family protein_id : NP_062305.1

name	Dbi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681137 CCDS:CCDS15230.1 GeneID:13167 MGI:94865
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; acyl-CoA binding protein; diazepam-binding inhibitor; diazepam binding inhibitor, splice form 1b product : diazepam binding inhibitor isoform 2 protein_id : NP_031856.1

name	Dbi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921595 CCDS:CCDS15231.1 GeneID:13167 MGI:94865
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; acyl-CoA binding protein; diazepam-binding inhibitor; diazepam binding inhibitor, splice form 1b product : diazepam binding inhibitor isoform 1 protein_id : NP_001033088.1

name	3110009E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930447 CCDS:CCDS15232.1 GeneID:73103 MGI:1920353
definition	codon_start : 1 product : hypothetical protein LOC73103 protein_id : NP_082715.1

name	Steap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875326 GeneID:68428 MGI:1915678
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005771 - multivesicular body [Evidence ISS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0000293 - ferric-chelate reductase activity [Evidence IMP] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IMP]; GO:0009306 - protein secretion [Evidence ISS] codon_start : 1 exception : unclassified translation discrepancy note : dudlin 2 product : dudulin 2 protein_id : NP_573449.1

name	C1ql2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402221 CCDS:CCDS15233.1 GeneID:226359 MGI:3032521
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : complement component 1, q subcomponent-like 2 protein_id : NP_997116.1

name	Marco (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754640 CCDS:CCDS15234.1 GeneID:17167 MGI:1309998
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA] GO_process : GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : macrophage receptor with collagenous structure protein_id : NP_034896.1

name	En1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106305 CCDS:CCDS15235.1 GeneID:13798 MGI:95389
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0030902 - hindbrain development [Evidence IGI]; GO:0030901 - midbrain development [Evidence IGI]; GO:0030917 - midbrain-hindbrain boundary development [Evidence IMP]; GO:0048666 - neuron development [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IGI]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] citation : [PUBMED 1363401] codon_start : 1 exception : mismatches in translation function : transcription factor note : engrailed-1 product : engrailed 1 protein_id : NP_034263.1

name	AI848258 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363929 GeneID:98452 MGI:2138347
definition	codon_start : 1 product : hypothetical protein LOC98452 protein_id : XP_900985.2

name	Insig2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526954 CCDS:CCDS15236.1 GeneID:72999 MGI:1920249
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 product : INSIG-2 membrane protein protein_id : NP_598509.1

name	Insig2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017389 CCDS:CCDS15236.1 GeneID:72999 MGI:1920249
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006991 - response to sterol depletion [Evidence IDA] codon_start : 1 product : INSIG-2 membrane protein protein_id : NP_835183.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68448542 CCDS:CCDS15237.1 GeneID:70829 MGI:1918079
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : coiled-coil domain containing 93 isoform a protein_id : NP_001020327.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539631 GeneID:70829 MGI:1918079
definition	codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant 2 product : coiled-coil domain containing 93 isoform b protein_id : NP_081843.1

name	Ccdc93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539651 CCDS:CCDS15238.1 GeneID:70829 MGI:1918079
definition	codon_start : 1 exception : mismatches in translation note : isoform c is encoded by transcript variant 3 product : coiled-coil domain containing 93 isoform c protein_id : NP_084231.1

name	LOC100041926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234242 GeneID:100041926
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477273.1

name	Htr5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754260 CCDS:CCDS15239.1 GeneID:15564 MGI:96284
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 5-hydroxytryptamine (serotonin) receptor 5B protein_id : NP_034613.1

name	Ddx18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981163 CCDS:CCDS15240.1 GeneID:66942 MGI:1914192
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 protein_id : NP_080136.2

name	LOC666656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666656
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:178453
definition	standard_name : AI173373

name	(CDS detail)
type	STS
link
xref	UniSTS:234199
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128529
definition	standard_name : D1Mit191

name	(CDS detail)
type	STS
link
xref	UniSTS:234200
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128750
definition	standard_name : D1Mit389

name	(CDS detail)
type	STS
link
xref	UniSTS:124530
definition	standard_name : 44.MMHAP24FRG11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158845
definition	standard_name : U18424

name	(CDS detail)
type	STS
link
xref	UniSTS:178454
definition	standard_name : AI323439

name	(CDS detail)
type	STS
link
xref	UniSTS:128752
definition	standard_name : D1Mit391

name	(CDS detail)
type	STS
link
xref	UniSTS:128568
definition	standard_name : D1Mit226

name	(CDS detail)
type	STS
link
xref	UniSTS:128630
definition	standard_name : D1Mit28

name	(CDS detail)
type	STS
link
xref	UniSTS:116257
definition	standard_name : D1Mit217

name	(CDS detail)
type	STS
link
xref	UniSTS:272950
definition	standard_name : PMC314463P1

name	(CDS detail)
type	STS
link
xref	UniSTS:98355
definition	standard_name : RH104030

name	(CDS detail)
type	STS
link
xref	UniSTS:142987
definition	standard_name : En1

name	(CDS detail)
type	STS
link
xref	UniSTS:128783
definition	standard_name : D1Mit419

name	(CDS detail)
type	STS
link
xref	UniSTS:128785
definition	standard_name : D1Mit420

name	(CDS detail)
type	STS
link
xref	UniSTS:142247
definition	standard_name : D1Mit470

name	(CDS detail)
type	STS
link
xref	UniSTS:178456
definition	standard_name : AI848258

name	(CDS detail)
type	STS
link
xref	UniSTS:128751
definition	standard_name : D1Mit390

name	(CDS detail)
type	STS
link
xref	UniSTS:272505
definition	standard_name : PMC303355P2

name	(CDS detail)
type	STS
link
xref	UniSTS:113660
definition	standard_name : AU027072

name	(CDS detail)
type	STS
link
xref	UniSTS:167280
definition	standard_name : AU022885

name	(CDS detail)
type	STS
link
xref	UniSTS:234201
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158843
definition	standard_name : AA959903

name	(CDS detail)
type	STS
link
xref	UniSTS:143429
definition	standard_name : Htr5b

name	(CDS detail)
type	STS
link
xref	UniSTS:178452
definition	standard_name : X69867

name	(CDS detail)
type	STS
link
xref	UniSTS:235514
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123980
definition	standard_name : 32.MMHAP32FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:333685
definition	standard_name : REN8885

name	(CDS detail)
type	STS
link
xref	UniSTS:158841
definition	standard_name : 38.MMHAP85FLE5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158842
definition	standard_name : C76132

name	(CDS detail)
type	STS
link
xref	UniSTS:128701
definition	standard_name : D1Mit343

name	(CDS detail)
type	STS
link
xref	UniSTS:128700
definition	standard_name : D1Mit342

clone name	MSMg01-386L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-346L07.b	B6Ng01-346L07.g
ACC	GA128528	GA128529
length	1,126	1,103
definition	B6Ng01-346L07.b	B6Ng01-346L07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(123,075,989 - 123,077,141)	(122,950,023 - 122,951,137)
sequence	gaattcttttatggaaccagtcgggtgtttttgtcctccaagctaccaga aggtggcgcgaattcaccgttgaaactgcaaagaagcagcagcagcgagg ctttcttttcttgcgcctggccctgtgagcctagtaaaacagagagaaag aaaacaacctccccccccccacacacacaccccaaaaaaagaaagaaaga aaaaaacccacccaagcccgttctctatttaaaaataaacgaatggcccg aaaaggttcgtctttgtaaaaaataaatcattctcaggttgcaatcgtcc acgtttttatagcgcgcctcttctgatgagagtcaaagagccgaagaagc gctggataaagatttgtggaggacaatttccaggattttgtgtaagaaac ttaagcagccgcttcgtgtgttcaagaaccaccatattcagaaatggcta atgttgacggttctaataaacatcaaaaaataaagaagttgtaaggcaca cattgcgttttattttgaaaatactcatgatatttaggtatttggacgtc tttagaacatctaggaccagacgctgtggagctttcttctgtattttcca aaagaaaattaaatgttaatagagagagcgagggatgtgacagtgagctc atagacacaaaaggagagaccccaccccaaccccccaagccaccaccgtt aatgccaaccagaataacaaaatctgcttccttggtccggtgagggtagc ccctgaatcaagctctgcctgaagtagctggtcagatgcctgtgttagtg gacattttccccaacattctcgaatattttagggactggatagtcatcaa gaagaaagggtttttttttttttttttaattaaaaaaatttaatttaaag gtccgactaactaaaagcacagtaaaaaacaaaactcaaacacccaaaac caaccaaacaaaagcattttttacattctagttgaaagccggtggtttaa agctaaagtctgtttaaagagcaacatgatatatcttttaaaaaatactc ccaagctctttataataagcaaacaggatcccagatgtttcaatagattc tagaaatcactagaaagtgacctcag	gaattccatgcatgcattatatttacatcatctccacccacattcccttt cttaagacttttgctgttgttgttctttatttgtgtggtatctgtgtgca tgtgcatgcaggcacccatggaagtcagaagagggcattgggttccctgg tggaactgaactcagttcctctgcaagagcaaaaagcatttgctgcctaa aactgcttattatatttaacagagaggccagcagtttcttgttgcatctg ggccttacaaatttgtctcatccgtcctgatttgcccaccctctcctcca tacactaaagctgtgaggccgctcttcagaaacagagaagcgaggtcctg tccatgccggaggcacaatgcgttcatatgtacaaatcacattcactctg ctcgccaataaattccaacggcactgtagccctcccagttcctgtaggcc cgggcctgctcaccaaggaaaaactgtgaaagagtgcatgctagtgggcg aaggtcagaatcgcagctactacttcctaccccaagcagaacactggcct ttcaggtggatgacagagaccccacccaggagttgacaacaggctctttt aattcagcattcatgtggcacaacgttcttggccttaatgacataggagt ttaggtccaggtaatctttttcaaaccaaccagttgtgaaatatattgag aaaacactgccaatttccaatcctctggactgaacaccgaaggtaaataa taatgaatatttatgggacacctgattgcctaaatgagttccctaaggta tgaataattgaatgtgcatatgctaattaattgggaaaagccagtaggta actcctttttatttgcattagcctcattttgtttcatttcttacaagtat tactgctctcagttatttcctatgcttcagtgaggtgagtgtcattgaga gaattcttaatagaccaccgtgattctatttcagtgactgcatagcaatg gcagagtatgaggggtatctagaataatagtttctttgccttgctaacaa taaagctgtgatcatgtactctgtcagctttctttgtgggtgtgtggatt gag
quality values	Open. Hide. 58 39 34 20 58 62 54 62 62 47 39 47 62 49 62 62 54 47 37 62 62 62 62 62 62 62 62 62 62 59 59 43 29 56 59 56 46 56 59 44 59 62 62 59 62 62 59 59 62 62 62 62 42 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 54 62 62 62 62 62 59 59 59 59 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 52 58 58 58 58 58 58 58 58 54 58 58 54 54 52 58 58 58 58 58 58 54 49 47 58 58 58 58 58 54 58 58 58 58 58 58 54 54 58 54 54 52 58 58 58 58 58 58 58 39 58 46 58 58 54 51 58 58 58 58 58 58 58 50 58 58 58 58 58 58 58 58 58 58 53 41 42 58 58 58 58 42 36 58 58 58 49 58 47 41 21 34 58 50 44 41 41 36 39 47 50 50 58 58 53 58 51 58 51 58 49 37 51 52 58 58 58 35 35 51 41 58 48 50 52 52 54 58 49 48 51 58 53 39 51 53 42 58 53 53 53 42 54 54 54 52 58 50 39 51 49 41 39 36 32 46 50 46 58 58 52 32 46 49 58 58 58 58 53 24 51 41 41 46 37 51 49 27 51 54 53 45 53 35 40 53 53 32 53 25 49 44 51 31 42 51 44 41 50 44 52 42 54 54 49 52 53 53 49 40 53 42 42 53 32 37 42 53 37 35 53 47 49 32 53 47 31 54 54 31 42 32 37 54 54 53 40 47 32 41 42 40 31 42 53 40 53 53 43 40 29 33 32 37 34 34 32 40 39 23 41 45 52 52 24 41 34 31 31 24 39 35 53 40 52 31 37 33 29 40 33 42 53 35 33 27 32 32 53 51 45 41 51 51 31 30 31 30 18 17 51 45 42 45 21 30 42 34 25 30 51 51 42 41 28 46 30 30 22 32 31 16 28 31 31 31 35 38 28 41 38 21 33 32 31 31 19 46 46 18 29 46 36 22 46 41 41 46 41 43 42 41 40 42 42 46 46 46 42 21 13 27 12 27 23 40 37 41 39 38 27 31 41 37 19 23 17 46 16 17 41 22 36 33 11 34 39 13 31 18 37 23 24 30 16 7 46 46 26 32 32 24 24 20 21 8 18 46 48 44 43 29 31 24 44 44 31 31 36 32 23 36 25 25 13 33 48 42 24 48 48 33 20 28 18 20 18 14 16 41 19 15 26 41 44 31 24 24 21 48 48 44 39 43 10 16 15 9 32 20 26 18 23 16 25 34 25 33 37 23 32 23 33 7 4 6 29 8 11 43 29 19 31 24 21 31 10 4 9 4 4 5 18 6 22 13 40 13 7 4 7 3 5 3 3 5 3 3 5 3 6 21 10 23 9 11 18 24 20 38 38 24 17 30 30 40 32 21 15 13 24 19 15 28 13 18 15 13 16 33 7 9 28 20 20 13 24 21 8 11 27 13 14 6 40 9 5 3 3 7 21 10 9 22 17 5 5 2 6 16 5 28 22 10 15 12 10 5 4 13 7 13 19 10 11 3 3 28 13 18 13 13 21 16 22 9 11 30 15 16 6 11 14 11 14 8 20 5 17	Open. Hide. 62 49 43 47 62 62 41 29 62 62 47 38 30 37 27 21 43 51 51 62 62 62 62 44 62 62 44 62 59 62 62 62 62 62 59 43 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 54 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 39 49 54 54 58 52 58 58 54 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 58 58 52 54 58 58 54 41 58 58 54 58 52 58 54 52 53 54 58 58 49 58 58 51 58 58 51 50 41 58 53 58 54 46 35 58 58 39 53 52 58 30 45 47 58 58 49 50 58 58 49 50 48 54 46 32 54 58 51 46 46 50 51 58 53 38 58 50 58 58 52 58 58 37 42 53 51 58 53 39 53 51 53 51 58 50 41 47 58 53 58 37 42 52 53 40 58 54 52 49 49 53 50 50 54 36 26 58 53 50 52 51 50 58 51 52 38 52 51 22 54 54 38 45 54 53 53 34 54 38 51 42 29 51 50 39 39 53 45 54 36 54 54 54 52 45 29 15 33 51 43 37 41 49 52 52 38 52 53 53 45 52 45 54 53 40 45 37 39 39 47 51 52 52 54 54 54 52 41 38 42 52 53 29 34 24 53 45 54 37 39 39 40 49 52 53 37 32 52 35 53 53 34 31 40 53 31 51 36 35 39 52 32 41 53 12 46 26 40 51 32 31 33 39 45 36 32 32 45 32 53 35 33 28 51 51 31 35 43 51 39 29 25 31 31 44 36 42 29 24 30 39 23 42 32 31 51 31 31 39 42 18 30 35 42 51 31 31 35 37 32 46 19 42 30 38 37 38 38 30 38 31 43 43 42 38 33 46 30 33 32 31 42 29 31 37 38 31 35 37 42 26 31 42 31 38 46 47 39 42 48 48 30 31 22 30 36 32 32 33 27 25 9 25 27 30 37 31 34 31 46 48 48 35 22 31 48 34 20 26 25 31 32 25 13 32 22 20 31 35 34 48 48 34 22 12 47 29 16 23 32 48 31 37 25 19 32 25 22 25 31 31 21 27 29 17 30 28 37 21 31 32 33 32 22 20 18 25 24 31 48 36 16 37 27 24 23 32 32 21 28 21 28 12 6 26 32 19 13 29 12 23 10 24 34 14 34 21 25 17 34 34 13 34 18 15 29 11 14 32 17 11 38 10 10 23 13 8 9 7 8 14 23 23 22 28 25 22 24 9 16 11 9 38 21 8 16 10 10 27 19 18 27 29 19 20 17 27 10 21 14 16 16 18 21 7 13 8 20 5 5 16 10 24 19 3 31 34 18 11 13 27 8 4 9 14 21 27 7 6 10 15 15 14 18 29 13 14 17 28 15 15 8 6 16 17 8 20 10 18 7 6 14 9 8 17 18 16 13 18 9 10 5 16 23 22 12 13 21 21 6 16 9 15 5 3 8 10 20 16 7 8 8 1 1 5 18 28 26 10 23 13 29 4 3 4 10 9 14 5 15 24 4 4 10 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_123075989_123077141
seq2: B6Ng01-346L07.b_45_1170 (reverse)

seq1  CTGAGGTCACTTTCTTAGTTGGAATTTCCTTAGAAATTCTAATTTGAAAA  50
      |||||||||||||| ||||    |||||  |||||  ||||  ||| |||
seq2  CTGAGGTCACTTTC-TAGT---GATTTC--TAGAA--TCTA--TTG-AAA  39

seq1  CATCCTTGGGATCTTTGGTTTGCTTTATTTATAAGAAGCTTTGGGAGTAT  100
      ||||  ||||||| |  ||||||||   ||||||  ||| ||||||||||
seq2  CATC--TGGGATCCT--GTTTGCTT--ATTATAAAGAGC-TTGGGAGTAT  82

seq1  TTTTTAAAAGATATTATCATTTTGTTTTTGTTTTTTTTTTAAACAGACCT  150
      ||||||||||||| |||||| |||           | |||||||||||  
seq2  TTTTTAAAAGATA-TATCATGTTG----------CTCTTTAAACAGAC--  119

seq1  TTTAGCTTTAAACCA-CGGCTTTCAACTAGAATGTAAAAAATGCTTTTTG  199
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  TTTAGCTTTAAACCACCGGCTTTCAACTAGAATGTAAAAAATGC-TTTTG  168

seq1  TTTGGTTGGTTTTGGGTGTTTGAGTTTTGTTTTTTACTGTGC-TTTAGTT  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTGGTTGGTTTTGGGTGTTTGAGTTTTGTTTTTTACTGTGCTTTTAGTT  218

seq1  AGTCGGACCTTT-AATTAAATTTTTTTAATT--AAAAAAAAAAAAAAACC  295
      |||||||||||| ||||||||||||||||||  |||||||||||||||||
seq2  AGTCGGACCTTTAAATTAAATTTTTTTAATTAAAAAAAAAAAAAAAAACC  268

seq1  CTTTCTTCTTGATGACTATCCAGTCCCTAAAATATTCGAGAATGTTGGGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTTGATGACTATCCAGTCCCTAAAATATTCGAGAATGTTGGGG  318

seq1  AAAATGTCCACTAACACAGGCATCTGACCAGCTACTTCAGGCAGAGCTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCACTAACACAGGCATCTGACCAGCTACTTCAGGCAGAGCTTG  368

seq1  ATTCAGGGGCTACCCTCACCGGACCAAGGAAGCAGATTTTGTTATTCTGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGGGCTACCCTCACCGGACCAAGGAAGCAGATTTTGTTATTCTGG  418

seq1  TTGGCATTAACGGTGGTGGCTTGGGGGGTTGGGGTGGGGTCTCTCCTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTAACGGTGGTGGCTTGGGGGGTTGGGGTGGGGTCTCTCCTTTT  468

seq1  GTGTCTATGAGCTCACTGTCACATCCCTCGCTCTCTCTATTAACATTTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTATGAGCTCACTGTCACATCCCTCGCTCTCTCTATTAACATTTAA  518

seq1  TTTTCTTTTGGAAAATACAGAAGAAAGCTCCACAGCGTCTGGTCCTAGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTGGAAAATACAGAAGAAAGCTCCACAGCGTCTGGTCCTAGAT  568

seq1  GTTCTAAAGACGTCCAAATACCTAAATATCATGAGTATTTTCAAAATAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAAGACGTCCAAATACCTAAATATCATGAGTATTTTCAAAATAAA  618

seq1  ACGCAATGTGTGCCTTACAACTTCTTTATTTTTTGATGTTTATTAGAACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAATGTGTGCCTTACAACTTCTTTATTTTTTGATGTTTATTAGAACC  668

seq1  GTCAACATTAGCCATTTCTGAATATGGTGGTTCTTGAACACACGAAGCGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACATTAGCCATTTCTGAATATGGTGGTTCTTGAACACACGAAGCGG  718

seq1  CTGCTTAAGTTTCTTACACAAAATCCTGGAAATTGTCCTCCACAAATCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAAGTTTCTTACACAAAATCCTGGAAATTGTCCTCCACAAATCTT  768

seq1  TATCCAGCGCTTCTTCGGCTCTTTGACTCTCATCAGAAGAGGCGCGCTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCGCTTCTTCGGCTCTTTGACTCTCATCAGAAGAGGCGCGCTAT  818

seq1  AAAAACGTGGACGATTGCAACCTGAGAATGATTTATTTTTTACAAAGACG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGTGGACGATTGCAACCTGAGAATGATTTATTTTTTACAAAGACG  868

seq1  AACCTTTTCGGGCCATTCGTTTATTTTTAAATAGAGAACGGGCTTGGGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTCGGGCCATTCGTTTATTTTTAAATAGAGAACGGGCTTGGGTG  918

seq1  GGTTTTTTTCTTTCTTTCTTTTTTTGGGGTGTGTGTGTGGGGGGGGGGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTCTTTCTTTCTTTTTTTGGGGTGTGTGTGTGGGGGGGGGGAG  968

seq1  GTTGTTTTCTTTCTCTCTGTTTTACTAGGCTCACAGGGCCAGGCGCAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTCTTTCTCTCTGTTTTACTAGGCTCACAGGGCCAGGCGCAAGA  1018

seq1  AAAGAAAGCCTCGCTGCTGCTGCTTCTTTGCAGTTTCAACGGTGAATTCG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCCTCGCTGCTGCTGCTTCTTTGCAGTTTCAACGGTGAATTCG  1068

seq1  CGCCACCTTCTGGTAGCTTGGAGGACAAAAACACCCGACTGGTTCCATAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACCTTCTGGTAGCTTGGAGGACAAAAACACCCGACTGGTTCCATAA  1118

seq1  AAGAATTC  1153
      ||||||||
seq2  AAGAATTC  1126

seq1: chr1_122950023_122951137
seq2: B6Ng01-346L07.g_71_1173

seq1  GAATTCCATGCATGCATTATATTTACATCATCTCCACCCACATTCCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCATGCATTATATTTACATCATCTCCACCCACATTCCCTTT  50

seq1  CTTAAGACTTTTGCTGTTGTTGTTCTTTATTTGTGTGGTATCTGTGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGACTTTTGCTGTTGTTGTTCTTTATTTGTGTGGTATCTGTGTGCA  100

seq1  TGTGCATGCAGGCACCCATGGAAGTCAGAAGAGGGCATTGGGTTCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGCAGGCACCCATGGAAGTCAGAAGAGGGCATTGGGTTCCCTGG  150

seq1  TGGAACTGAACTCAGTTCCTCTGCAAGAGCAAAAAGCATTTGCTGCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGAACTCAGTTCCTCTGCAAGAGCAAAAAGCATTTGCTGCCTAA  200

seq1  AACTGCTTATTATATTTAACAGAGAGGCCAGCAGTTTCTTGTTGCATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTATTATATTTAACAGAGAGGCCAGCAGTTTCTTGTTGCATCTG  250

seq1  GGCCTTACAAATTTGTCTCATCCGTCCTGATTTGCCCACCCTCTCCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTACAAATTTGTCTCATCCGTCCTGATTTGCCCACCCTCTCCTCCA  300

seq1  TACACTAAAGCTGTGAGGCCGCTCTTCAGAAACAGAGAAGCGAGGTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTAAAGCTGTGAGGCCGCTCTTCAGAAACAGAGAAGCGAGGTCCTG  350

seq1  TCCATGCCGGAGGCACAATGCGTTCATATGTACAAATCACATTCACTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCGGAGGCACAATGCGTTCATATGTACAAATCACATTCACTCTG  400

seq1  CTCGCCAATAAATTCCAACGGCACTGTAGCCCTCCCAGTTCCTGTAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCAATAAATTCCAACGGCACTGTAGCCCTCCCAGTTCCTGTAGGCC  450

seq1  CGGGCCTGCTCACCAAGGAAAAACTGTGAAAGAGTGCATGCTAGTGGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCTGCTCACCAAGGAAAAACTGTGAAAGAGTGCATGCTAGTGGGCG  500

seq1  AAGGTCAGAATCGCAGCTACTACTTCCTACCCCAAGCAGAACACTGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAGAATCGCAGCTACTACTTCCTACCCCAAGCAGAACACTGGCCT  550

seq1  TTCAGGTGGATGACAGAGACCCCACCCAGGAGTTGACAACAGGCTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGGATGACAGAGACCCCACCCAGGAGTTGACAACAGGCTCTTTT  600

seq1  AATTCAGCATTCATGTGGCACAACGTTCTTGGCCTTAATGACATAGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCATTCATGTGGCACAACGTTCTTGGCCTTAATGACATAGGAGT  650

seq1  TTAGGTCCAGGTAATCTTTTTCAAACCAACCAGTTGTGAAATATATTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCAGGTAATCTTTTTCAAACCAACCAGTTGTGAAATATATTGAG  700

seq1  AAAACACTGCCAATTTCCAATCCTCTGGACTGAACACCGAAGGTAAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGCCAATTTCCAATCCTCTGGACTGAACACCGAAGGTAAATAA  750

seq1  TAATGAATATTTATGGGACACCTGATTGCCTAAATGAGTTCCCTAAGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATATTTATGGGACACCTGATTGCCTAAATGAGTTCCCTAAGGTA  800

seq1  TGAATAATTGAATGTGCATATGCTAATTAATTGGGAAAAGCCAGTAGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTGAATGTGCATATGCTAATTAATTGGGAAAAGCCAGTAGGTA  850

seq1  ACTCCTTTTTATTTGCATTAGCCTCATTTTGTTTCATTTCTTACAAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTTTATTTGCATTAGCCTCATTTTGTTTCATTTCTTACAAGTAT  900

seq1  TACTGCTCTCAGTTATTTCCTATGCTTCAGTGAGGTTGAGTGTCATTGAG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACTGCTCTCAGTTATTTCCTATGCTTCAGTGAGG-TGAGTGTCATTGAG  949

seq1  AGAATTCTTAATAGA-CACCGTGATTCTTAATTTCAGTGACTGCATAAGC  999
      ||||||||||||||| ||||||||||||  |||||||||||||||| |||
seq2  AGAATTCTTAATAGACCACCGTGATTCT--ATTTCAGTGACTGCAT-AGC  996

seq1  AATGGCAGAGTATGAAGGGGTATTCTTAGAAT-ATAGTTTCTTTGCTTTG  1048
      |||||||||||||| ||||||||   |||||| ||||||||||||| |||
seq2  AATGGCAGAGTATG-AGGGGTAT--CTAGAATAATAGTTTCTTTGCCTTG  1043

seq1  CCTAACAATAAAAGCTGTGATTCATTGGTACTTCCTGTCAGCTGTCTTTG  1098
       |||||||| |||||||||| ||||  |||||  ||||||||| ||||||
seq2  -CTAACAAT-AAAGCTGTGA-TCAT--GTACT--CTGTCAGCTTTCTTTG  1086

seq1  TGGGTGTGTGGAGTGAG  1115
      |||||||||||| ||||
seq2  TGGGTGTGTGGATTGAG  1103

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information