BAC Information

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BAC

Clone NameB6Ng01-347A07
Chromosome1 (Build37)
Map Location 144,002,546 - 144,003,673
singlet/doubletsinglet
Overlap genenone
Upstream geneEG226472
Downstream geneLOC639376, LOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347A07.bB6Ng01-347A07.g
ACCGA128751GA128752
length1,1321,222
definitionB6Ng01-347A07.b B6Ng01-347A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtatcttcaaattcttctatatttattccacatgctattttaa
aggtctaacagattaaggtcaagactagtaataaaaacaagcctactgat
ttggttcaaaaactttgtattagatgtttttattgttaaaacaagaatat
ctgtagaaataactgaatataagagatattatagttcatagttttagagg
gcttcagtttaatgtagaacagaatgaggaggagaagggctaatgctatg
aaaatagaaagtgcagaggcttttcttattataataatagacacatatta
ttctaagtactctgtcctaagtcacctatttctaccaggaaagtcacaca
atataaaggttctacagtccctaagataatactgtcatctaggaagtagt
gttcatagtttgtgtcagtggaagaactttcatattcaaccataacatga
ggaaaaatcaatttaaagcctttctttctttgaagtatatttcaagacac
atgatggcatataatgttagtcttaccagtacttgggagataacaccaga
atgataataatttcaaacacagtgagaactgctcagtggaattttcaaaa
gagatccctggagcaatttgtcagcaaatctagttgaataaatactcagt
gagagaacttgtgtctgataataaagtagagagccatcaaggaagatgtc
acctgtcaacatttgacctctaaatgtgtgcacataaccctcaaaattat
tcatacaaatacataaatatgtatattctcacttgcctcccatgcaagta
cttggaaagcaaaatgaatttagatatttgcatcccaccaatggacagaa
gccagagacccctgtagttgaactagggaaaagctagaagaaattaagga
ggagagcaaccctgtaggagcaccatcagtctgaattaacctggacccct
gagatctctcagatactggaccaccatcaggcagcatacaccaactgata
caaagccccaacacatatacagcagatgactgccaggcctgagttcagtc
agagtagataccacttaaccatcagagtcttggaggacccagggaacagg
aagatctggggggtttgtgggggtggggaagg

gaattctgtttctatttaccagtgatctaaggatttcaatttataaatta
atgtaatgaccttgactttatatttaacattttatgatggttaatccagg
taacctagaaatgactcatttcctttaactctttaatcaaatcttacact
taaaaatacctatcacatatttatttaatttacttttaacagttgcatca
acaggggaaaccccaggtgaagaaatgttgataatattgaaaatatttta
aatggctaacatataattttatctttcaaatgcatttaggcagaatgttc
aataatgttcatgtgttaatactgtaagcacacagaaccaaaattaaatt
caccagaaaaacatcttaagatattacaattacccaacaatatggagagg
aaacttcattaagtctacctccatttgaaagacagagcatcaagtggagg
aatgagcttgtcatcccacacagtcagaaatgctattctagaataattct
ggtctaaagcactgcagtgacaaaactggtgaagagactgaaagaaagga
ggcccagtgatcagcccaacttggtatccaccaaaaggggaggcttcaag
gcctgacaatattactgatgctatggtgtgcttataggaccttagcattg
ttgtctcctgagagaggtccaacaagtagctgtctgagacagatgtcaat
actaacacacaaccaatagactgaagttagggacccctgtggttgaatta
gggaaaggctggaagaagccaaggaggagggtgactccataggaagacta
gcagtttcaactaacccagaccccagagatcaatcagacacactgagcca
ccaatcaggtagcatacaatagctggtctgaggcccctgacacatataca
gtagaggatcatctagcctggcccctgcggagtgtggaggtctctccggg
gtgggggagtatgggcatggggacatcctcttggagacatctgggaggag
aaatggtatggtgggactgtgggaggcagaccagagtgggttagactata
ctgttaaaaaaaaaaaaggacctgaaatagctgtctcttgtgagaactat
gcgggtgcctcacagtcagctatggatgtaccaaggtcccattgaaggac
ctaggaaggtactaggagcctaagggtctgcaccttatagggtggaacac
acactatatgaatctacgagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144002546_144003673
seq2: B6Ng01-347A07.b_47_1178

seq1  GAATTCTGTATCTTCAAATTCTTCTATATTTATTCCACATGCTATTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATCTTCAAATTCTTCTATATTTATTCCACATGCTATTTTAA  50

seq1  AGGTCTAACAGATTAAGGTCAAGACTAGTAATAAAAACAAGCCTACTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTAACAGATTAAGGTCAAGACTAGTAATAAAAACAAGCCTACTGAT  100

seq1  TTGGTTCAAAAACTTTGTATTAGATGTTTTTATTGTTAAAACAAGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCAAAAACTTTGTATTAGATGTTTTTATTGTTAAAACAAGAATAT  150

seq1  CTGTAGAAATAACTGAATATAAGAGATATTATAGTTCATAGTTTTAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAATAACTGAATATAAGAGATATTATAGTTCATAGTTTTAGAGG  200

seq1  GCTTCAGTTTAATGTAGAACAGAATGAGGAGGAGAAGGGCTAATGCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTTTAATGTAGAACAGAATGAGGAGGAGAAGGGCTAATGCTATG  250

seq1  AAAATAGAAAGTGCAGAGGCTTTTCTTATTATAATAATAGACACATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAAGTGCAGAGGCTTTTCTTATTATAATAATAGACACATATTA  300

seq1  TTCTAAGTACTCTGTCCTAAGTCACCTATTTCTACCAGGAAAGTCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGTACTCTGTCCTAAGTCACCTATTTCTACCAGGAAAGTCACACA  350

seq1  ATATAAAGGTTCTACAGTCCCTAAGATAATACTGTCATCTAGGAAGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGGTTCTACAGTCCCTAAGATAATACTGTCATCTAGGAAGTAGT  400

seq1  GTTCATAGTTTGTGTCAGTGGAAGAACTTTCATATTCAACCATAACATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAGTTTGTGTCAGTGGAAGAACTTTCATATTCAACCATAACATGA  450

seq1  GGAAAAATCAATTTAAAGCCTTTCTTTCTTTGAAGTATATTTCAAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATCAATTTAAAGCCTTTCTTTCTTTGAAGTATATTTCAAGACAC  500

seq1  ATGATGGCATATAATGTTAGTCTTACCAGTACTTGGGAGATAACACCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCATATAATGTTAGTCTTACCAGTACTTGGGAGATAACACCAGA  550

seq1  ATGATAATAATTTCAAACACAGTGAGAACTGCTCAGTGGAATTTTCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATAATTTCAAACACAGTGAGAACTGCTCAGTGGAATTTTCAAAA  600

seq1  GAGATCCCTGGAGCAATTTGTCAGCAAATCTAGTTGAATAAATACTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCCTGGAGCAATTTGTCAGCAAATCTAGTTGAATAAATACTCAGT  650

seq1  GAGAGAACTTGTGTCTGATAATAAAGTAGAGAGCCATCAAGGAAGATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACTTGTGTCTGATAATAAAGTAGAGAGCCATCAAGGAAGATGTC  700

seq1  ACCTGTCAACATTTGACCTCTAAATGTGTGCACATAACCCTCAAAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCAACATTTGACCTCTAAATGTGTGCACATAACCCTCAAAATTAT  750

seq1  TCATACAAATACATAAATATGTATATTCTCACTTGCCTCCCATGCAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAAATACATAAATATGTATATTCTCACTTGCCTCCCATGCAAGTA  800

seq1  CTTGGAAAGCAAAATGAATTTAGATATTTGCATCCCACCAATGGACAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAGCAAAATGAATTTAGATATTTGCATCCCACCAATGGACAGAA  850

seq1  GCCAGAGACCCCTGTAGTTGAACTAGGGAAAAGCTAGAAGAAATTAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGACCCCTGTAGTTGAACTAGGGAAAAGCTAGAAGAAATTAAGGA  900

seq1  GGAGAGCAACCCTGTAGGAGCACCATCAGTCTGAATTAACCTGGACCCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAACCCTGTAGGAGCACCATCAGTCTGAATTAACCTGGACCCCT  950

seq1  GAGATCTCTCAGATACTGGACCACCATCAGGCAGCATACACCAACTGATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTCTCAGATACTGGACCACCATCAGGCAGCATACACCAACTGATA  1000

seq1  CAAAGCCCCCAACACATATACAGCAGATGACTGCCAGGCCTGAGTTCAGT  1050
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAG-CCCCAACACATATACAGCAGATGACTGCCAGGCCTGAGTTCAGT  1049

seq1  CAGAGTAGATA-CACTTAACCATCAAGAGTC-TGGAGGACCCAGGGAACA  1098
      ||||||||||| |||||||||||| |||||| ||||||||||||||||||
seq2  CAGAGTAGATACCACTTAACCATC-AGAGTCTTGGAGGACCCAGGGAACA  1098

seq1  GGGAGATCTGGTGGGT---TGGGGGT-GGGAAGG  1128
      || |||||||| ||||   ||||||| |||||||
seq2  GGAAGATCTGGGGGGTTTGTGGGGGTGGGGAAGG  1132


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