BAC Information

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BAC

Clone NameB6Ng01-347G22
Chromosome1 (Build37)
Map Location 147,301,652 - 147,437,094
singlet/doubletdoublet
Overlap genenone
Upstream geneRgs21, Rgs18, LOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347G22.bB6Ng01-347G22.g
ACCGA129033GA129034
length1,0641,117
definitionB6Ng01-347G22.b B6Ng01-347G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,436,023 - 147,437,094)(147,301,652 - 147,302,765)
sequence
gaattctttgttcagttctgggggcttgaaattctgatttattttatcct
tgtcttaacagattggctcctggttctgaaataatgatttgtgatataca
gttacaaattactctccttaattcatgcaatctctagaaaccttacttaa
gattaaggatgcatatatttgattgcaattcttctaagaagtgtttatca
ctatcctatttttatgaatctaagagtatatttttcacaaataacaaaga
aaaatgaagggaagctaatttatgttccctttgtttttgctcagattaaa
gctgttttgtagttaataggctatttttctctaaaattgtcttgccttct
taatataattaaagtatttctgtgaacatactctagaatatcatttttgt
attatgctatataaaaccagcaccttaaggaaagatgaaaatagacagac
tttctttggcatttgcaattcagaaacttcatgtggaccaaacaaaattt
tgtcagtttttctgatcaaaatcatttaaattaacttctaactttccttt
ttccccttagtatacaattatacttctctttaaagtattaaattatacac
agacataagtccatacacctatagcacttgattttagacaaagaagtaaa
agatactcaatgtagagaatacaatatcctcaacaaatagtgctggtaaa
actgtgtgactgtagaaaagtgaaaatagatccacatcaatcaccctgca
caaagctcaactgaaaatggaccaagggaatcagcctaaggccagacaac
tttaaatttacagaagtaaagttgaacttaagcttaaaatcattgcaaca
ggaaatgtagttttgagcaagttactaataataaagacattaagatccaa
agttgaaactgttaacttatgaagctgaaaaacttctgtttaataaggat
acaacattagggtaaagcactcactttcaaatgagaaaagcctctaacat
atatgtgtgtgtgtatatatatatgtgtgtgtttatgtatattatataaa
tataatttatatat
gaattcaaggacaacctatttttattgtgttttttgattttcaaaatggt
caactgaaacttttgtacattttcttggatcaaataataagctgaagaga
agatatctgcatttactaatgtgatgatttaaatatacaaagtactatca
catttaacaataagtagattcatattaaggtatattttagaccattaatt
taatattttattttgtagtagcatcttgcatcatgatgctaagatttcta
ctgattccagttttccattttctagtgatttttcttagattgctataaat
gaaaccacttactaatctatatttactgcttattttccattatgttaaat
taaatattgcatcaggattaacataagaataaaatgctaaacgtctcaat
gcatgtatagcatatttaattttactgcactaactgttaagctctaaagc
ttttaatggcgaaataatattgattaatggaacttcatacttgactacta
ggcttattttgatattatgactatgaatgtaaagccttttacattcaatg
tgttgatttgactattcctggtaaaatttaatttctccaatggagtctga
ctaagtataaaaaaacacatgaaagagcagtttccatacctacagtggtt
ggccaacataaaaaatttcagtagaattttttaaagcatttttgtctcac
actgccttttctggtttactttatgtttatatattgtagttttgtgaatt
tcttgggtttttgtttttgtttgttttacttttggttcacttatttgctt
tgtcctattttggtttgtcttcattgtatcttacttcattattcatttat
tatgtatattaaatacctattgttttctaataaatgagaaatgaggattc
agtgtgtgggtaaggttgagaagatcttgtggtagttaggtgacgagaaa
cagcaatcagaatatattgtatgaaaatttaagcatttggtagtccactg
tttgttttcatttattatttagatttaggtttaaattataatattataaa
tgattattctctgtatgggatatttttgctttcaatgtaatgcttccatt
ccataagggttaattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147436023_147437094
seq2: B6Ng01-347G22.b_46_1109 (reverse)

seq1  ATATATAAATTATAATTTATATAATTATACATAAACACACACATATATAT  50
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  ATATATAAATTAT-ATTTATATAA-TATACATAAACACACACATATATAT  48

seq1  ATACACACACACATATAATTGTTAGAAGGCTTTTCTCATTTTGAAAGTGA  100
      |||||||||||||||||  |||||| |||||||||||| |||||||||||
seq2  ATACACACACACATATA--TGTTAG-AGGCTTTTCTCA-TTTGAAAGTGA  94

seq1  GTGCTTTACCCTAATGTTGGTATCCCTTATTAAACAGAAGTTTTTCAGCT  150
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  GTGCTTTACCCTAATGTT-GTAT-CCTTATTAAACAGAAGTTTTTCAGCT  142

seq1  TCATAAGTTAACAGTTTCAACTTTGGATCTTAATGTCTTTATTATTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTTAACAGTTTCAACTTTGGATCTTAATGTCTTTATTATTAGTA  192

seq1  ACTTGCTCAAAACTACATTTCCTGTTGCAATGATTTTAAGCTTAAGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCAAAACTACATTTCCTGTTGCAATGATTTTAAGCTTAAGTTCA  242

seq1  ACTTTACTTCTGTAAATTTAAAGTTGTCTGGCCTTAGGCTGATTCCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTTCTGTAAATTTAAAGTTGTCTGGCCTTAGGCTGATTCCCTTG  292

seq1  GTCCATTTTCAGTTGAGCTTTGTGCAGGGTGATTGATGTGGATCTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTTCAGTTGAGCTTTGTGCAGGGTGATTGATGTGGATCTATTTT  342

seq1  CACTTTTCTACAGTCACACAGTTTTACCAGCACTATTTGTTGAGGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTACAGTCACACAGTTTTACCAGCACTATTTGTTGAGGATATT  392

seq1  GTATTCTCTACATTGAGTATCTTTTACTTCTTTGTCTAAAATCAAGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCTACATTGAGTATCTTTTACTTCTTTGTCTAAAATCAAGTGCT  442

seq1  ATAGGTGTATGGACTTATGTCTGTGTATAATTTAATACTTTAAAGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGTATGGACTTATGTCTGTGTATAATTTAATACTTTAAAGAGAAG  492

seq1  TATAATTGTATACTAAGGGGAAAAAGGAAAGTTAGAAGTTAATTTAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGTATACTAAGGGGAAAAAGGAAAGTTAGAAGTTAATTTAAATG  542

seq1  ATTTTGATCAGAAAAACTGACAAAATTTTGTTTGGTCCACATGAAGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATCAGAAAAACTGACAAAATTTTGTTTGGTCCACATGAAGTTTC  592

seq1  TGAATTGCAAATGCCAAAGAAAGTCTGTCTATTTTCATCTTTCCTTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCAAATGCCAAAGAAAGTCTGTCTATTTTCATCTTTCCTTAAGG  642

seq1  TGCTGGTTTTATATAGCATAATACAAAAATGATATTCTAGAGTATGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTTTTATATAGCATAATACAAAAATGATATTCTAGAGTATGTTCA  692

seq1  CAGAAATACTTTAATTATATTAAGAAGGCAAGACAATTTTAGAGAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATACTTTAATTATATTAAGAAGGCAAGACAATTTTAGAGAAAAAT  742

seq1  AGCCTATTAACTACAAAACAGCTTTAATCTGAGCAAAAACAAAGGGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATTAACTACAAAACAGCTTTAATCTGAGCAAAAACAAAGGGAACA  792

seq1  TAAATTAGCTTCCCTTCATTTTTCTTTGTTATTTGTGAAAAATATACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGCTTCCCTTCATTTTTCTTTGTTATTTGTGAAAAATATACTCT  842

seq1  TAGATTCATAAAAATAGGATAGTGATAAACACTTCTTAGAAGAATTGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCATAAAAATAGGATAGTGATAAACACTTCTTAGAAGAATTGCAA  892

seq1  TCAAATATATGCATCCTTAATCTTAAGTAAGGTTTCTAGAGATTGCATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATATGCATCCTTAATCTTAAGTAAGGTTTCTAGAGATTGCATGA  942

seq1  ATTAAGGAGAGTAATTTGTAACTGTATATCACAAATCATTATTTCAGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGAGAGTAATTTGTAACTGTATATCACAAATCATTATTTCAGAAC  992

seq1  CAGGAGCCAATCTGTTAAGACAAGGATAAAATAAATCAGAATTTCAAGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCAATCTGTTAAGACAAGGATAAAATAAATCAGAATTTCAAGCC  1042

seq1  CCCAGAACTGAACAAAGAATTC  1072
      ||||||||||||||||||||||
seq2  CCCAGAACTGAACAAAGAATTC  1064

seq1: chr1_147301652_147302765
seq2: B6Ng01-347G22.g_67_1183

seq1  GAATTCAAGGACAACCTATTTTTATTGTGTTTTTTGATTTTCAAAATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACAACCTATTTTTATTGTGTTTTTTGATTTTCAAAATGGT  50

seq1  CAACTGAAACTTTTGTACATTTTCTTGGATCAAATAATAAGCTGAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAACTTTTGTACATTTTCTTGGATCAAATAATAAGCTGAAGAGA  100

seq1  AGATATCTGCATTTACTAATGTGATGATTTAAATATACAAAGTACTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGCATTTACTAATGTGATGATTTAAATATACAAAGTACTATCA  150

seq1  CATTTAACAATAAGTAGATTCATATTAAGGTATATTTTAGACCATTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACAATAAGTAGATTCATATTAAGGTATATTTTAGACCATTAATT  200

seq1  TAATATTTTATTTTGTAGTAGCATCTTGCATCATGATGCTAAGATTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTATTTTGTAGTAGCATCTTGCATCATGATGCTAAGATTTCTA  250

seq1  CTGATTCCAGTTTTCCATTTTCTAGTGATTTTTCTTAGATTGCTATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCAGTTTTCCATTTTCTAGTGATTTTTCTTAGATTGCTATAAAT  300

seq1  GAAACCACTTACTAATCTATATTTACTGCTTATTTTCCATTATGTTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACTTACTAATCTATATTTACTGCTTATTTTCCATTATGTTAAAT  350

seq1  TAAATATTGCATCAGGATTAACATAAGAATAAAATGCTAAACGTCTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTGCATCAGGATTAACATAAGAATAAAATGCTAAACGTCTCAAT  400

seq1  GCATGTATAGCATATTTAATTTTACTGCACTAACTGTTAAGCTCTAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATAGCATATTTAATTTTACTGCACTAACTGTTAAGCTCTAAAGC  450

seq1  TTTTAATGGCGAAATAATATTGATTAATGGAACTTCATACTTGACTACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGGCGAAATAATATTGATTAATGGAACTTCATACTTGACTACTA  500

seq1  GGCTTATTTTGATATTATGACTATGAATGTAAAGCCTTTTACATTCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTTTGATATTATGACTATGAATGTAAAGCCTTTTACATTCAATG  550

seq1  TGTTGATTTGACTATTCCTGGTAAAATTTAATTTCTCCAATGGAGTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTTGACTATTCCTGGTAAAATTTAATTTCTCCAATGGAGTCTGA  600

seq1  CTAAGTATAAAAAAACACATGAAAGAGCAGTTTCCATACCTACAGTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATAAAAAAACACATGAAAGAGCAGTTTCCATACCTACAGTGGTT  650

seq1  GGCCAACATAAAAAATTTCAGTAGAATTTTTTAAAGCATTTTTGTCTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACATAAAAAATTTCAGTAGAATTTTTTAAAGCATTTTTGTCTCAC  700

seq1  ACTGCCTTTTCTGGTTTACTTTATGTTTATATATTGTAGTTTTGTGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTTTCTGGTTTACTTTATGTTTATATATTGTAGTTTTGTGAATT  750

seq1  TCTTGGGTTTTTGTTTTTGTTTGTTTTACTTTTGGTTCACTTATTTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTTTTTGTTTTTGTTTGTTTTACTTTTGGTTCACTTATTTGCTT  800

seq1  TGTCCTATTTTGGTTTGTCTTCATTGTATCTTACTTCATTATTCATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTATTTTGGTTTGTCTTCATTGTATCTTACTTCATTATTCATTTAT  850

seq1  TATGTATATTAAATACCTATTGTTTTCTAATAAATGAGAAATGAGGATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATTAAATACCTATTGTTTTCTAATAAATGAGAAATGAGGATTC  900

seq1  AGGTGTGTGGGTAAGGTTGAGAAGATCTTGTGGTAGTTAGGTGACGAGAA  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GTGTGTGGGTAAGGTTGAGAAGATCTTGTGGTAGTTAGGTGACGAGAA  949

seq1  ACAGCAATCAGAATATATTGTATGAAAATTTAAGCATTTGGTAGT-CACT  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACAGCAATCAGAATATATTGTATGAAAATTTAAGCATTTGGTAGTCCACT  999

seq1  GTTTTGTTTTCATTTATTATTTAGATTTA-GTTTTAATTATATATA-TAT  1047
      | ||||||||||||||||||||||||||| |||| ||||||| ||| |||
seq2  G-TTTGTTTTCATTTATTATTTAGATTTAGGTTTAAATTATA-ATATTAT  1047

seq1  AAATGGTTTATCTCTGTATGGG-TA-TTTTGC-TTCAATGT-ATGCTTCC  1093
      ||||| ||  |||||||||||| || |||||| |||||||| ||||||||
seq2  AAATGATTATTCTCTGTATGGGATATTTTTGCTTTCAATGTAATGCTTCC  1097

seq1  ATTCCATAAAGGGTAAATTTA  1114
      ||||||| |||||| ||||||
seq2  ATTCCAT-AAGGGTTAATTTA  1117