BAC Information

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BAC

Clone NameB6Ng01-347J14
Chromosome1 (Build37)
Map Location 128,220,183 - 128,365,641
singlet/doubletdoublet
Overlap geneE030049G20Rik
Upstream geneActr3, Slc35f5, Lypd1
Downstream geneLOC383559, Mgat5, LOC667090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347J14.bB6Ng01-347J14.g
ACCGA129155GA129156
length882312
definitionB6Ng01-347J14.b B6Ng01-347J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,364,767 - 128,365,641)(128,220,183 - 128,220,494)
sequence
gaattcaggattctagaattgagtggtatggtgttttggagaatatattt
ctaaacctgggacctgcattttgtgtgctctcatgttgtgtgctcttgga
catcctcttgccttgctgggtcagctggagtccatcagtctttgcaatct
gaggcactcattgaaactatttattttattgtgatttaccttgtaccttg
atagtgtgatccatatatggatgttaacttggaggcaactgctgattgaa
aattcttttcaggacttttaagagaggttattttgaatatgacaaaacat
gatacgttgaatgggctttcataggtatattagactgattgattgttcag
ataggaaaggctgtatgagtgatgtaatttgtcttagtgctcttaaaata
atttttatttccaatgatgcgtttatgagtcagtgtgatattttgatatg
taaatatttatagggttgtgtgatattctaatatgaatatagttataggg
cagggttatattttgatacattctctgtactttgagttcattggccagaa
ctcttaactgcacaggaggctgggaaatggtttatctctctccaaaagaa
agaatttgggtaaatctttaccaattatagttacatgcatttgtgtaaca
ttttagttcagtattattatgtgtattatatataatatataagatatctg
ttttacattatgcactcatatatattctatgtctcatctatgtgaattat
gtatgcacaccaaaaactttttgtgaatcagccttggggaataactaatg
ttttctgaaactttttttgagtgtaactttactttgcatcttaagtgtat
gtgtatgtggtgtgttcatttgggtatgtatc

tatgagtttgactttttttctttgtttctgtaggtgaattctgaggatgc
agtgtgctgagtgttaactgcgactttagccttagaagcagcagtactgg
tttgggaaaccatcgtaacattatgcaatgttctcaataaaattagaatc
tttggggtttttctagaaacccaagtttaagtgaaaaaagaacttagaag
catagaatgctttcaagtaaaataggttatttcttaatacctctgtaagg
ccattttcctaaatgttctttcttcctttgatgtgtgtgtatgtgtgtgt
gtgtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128364767_128365641
seq2: B6Ng01-347J14.b_52_932 (reverse)

seq1  ATACATACACAAATGAACACA-CACATACACATACACTT-AGATGC-AAG  47
      |||||||| |||||||||||| ||||||||||||||||| |||||| |||
seq2  ATACATACCCAAATGAACACACCACATACACATACACTTAAGATGCAAAG  50

seq1  T-AAGTTACACTC-AAAAAAGTTTCAGAAAACATTAGTTTATTCCCAAGG  95
      | ||||||||||| |||||||||||||||||||||||||  | |||||||
seq2  TAAAGTTACACTCAAAAAAAGTTTCAGAAAACATTAGTTATTCCCCAAGG  100

seq1  CTGATTCAC-AAAAGTTTTTGGTGTGCATACATAATTCACATAGATGAGA  144
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCACAAAAAGTTTTTGGTGTGCATACATAATTCACATAGATGAGA  150

seq1  CATAGAATATATATGAGTGCATAATGTAAAACAGATATCTTATATATTAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATATATATGAGTGCATAATGTAAAACAGATATCTTATATATTAT  200

seq1  ATATAATACACATAATAATACTGAACTAAAATGTTACACAAATGCATGTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATACACATAATAATACTGAACTAAAATGTTACACAAATGCATGTA  250

seq1  ACTATAATTGGTAAAGATTTACCCAAATTCTTTCTTTTGGAGAGAGATAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATTGGTAAAGATTTACCCAAATTCTTTCTTTTGGAGAGAGATAA  300

seq1  ACCATTTCCCAGCCTCCTGTGCAGTTAAGAGTTCTGGCCAATGAACTCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCCCAGCCTCCTGTGCAGTTAAGAGTTCTGGCCAATGAACTCAA  350

seq1  AGTACAGAGAATGTATCAAAATATAACCCTGCCCTATAACTATATTCATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGAGAATGTATCAAAATATAACCCTGCCCTATAACTATATTCATA  400

seq1  TTAGAATATCACACAACCCTATAAATATTTACATATCAAAATATCACACT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATCACACAACCCTATAAATATTTACATATCAAAATATCACACT  450

seq1  GACTCATAAACGCATCATTGGAAATAAAAATTATTTTAAGAGCACTAAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATAAACGCATCATTGGAAATAAAAATTATTTTAAGAGCACTAAGA  500

seq1  CAAATTACATCACTCATACAGCCTTTCCTATCTGAACAATCAATCAGTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTACATCACTCATACAGCCTTTCCTATCTGAACAATCAATCAGTCT  550

seq1  AATATACCTATGAAAGCCCATTCAACGTATCATGTTTTGTCATATTCAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACCTATGAAAGCCCATTCAACGTATCATGTTTTGTCATATTCAAA  600

seq1  ATAACCTCTCTTAAAAGTCCTGAAAAGAATTTTCAATCAGCAGTTGCCTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTCTCTTAAAAGTCCTGAAAAGAATTTTCAATCAGCAGTTGCCTC  650

seq1  CAAGTTAACATCCATATATGGATCACACTATCAAGGTACAAGGTAAATCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAACATCCATATATGGATCACACTATCAAGGTACAAGGTAAATCA  700

seq1  CAATAAAATAAATAGTTTCAATGAGTGCCTCAGATTGCAAAGACTGATGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATAAATAGTTTCAATGAGTGCCTCAGATTGCAAAGACTGATGG  750

seq1  ACTCCAGCTGACCCAGCAAGGCAAGAGGATGTCCAAGAGCACACAACATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCTGACCCAGCAAGGCAAGAGGATGTCCAAGAGCACACAACATG  800

seq1  AGAGCACACAAAATGCAGGTCCCAGGTTTAGAAATATATTCTCCAAAACA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACACAAAATGCAGGTCCCAGGTTTAGAAATATATTCTCCAAAACA  850

seq1  CCATACCACTCAATTCTAGAATCCTGAATTC  875
      |||||||||||||||||||||||||||||||
seq2  CCATACCACTCAATTCTAGAATCCTGAATTC  881


seq1: chr1_128220183_128220494
seq2: B6Ng01-347J14.g_78_389

seq1  TATGAGTTTGACTTTTTTTCTTTGTTTCTGTAGGTGAATTCTGAGGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTTGACTTTTTTTCTTTGTTTCTGTAGGTGAATTCTGAGGATGC  50

seq1  AGTGTGCTGAGTGTTAACTGCGACTTTAGCCTTAGAAGCAGCAGTACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTGAGTGTTAACTGCGACTTTAGCCTTAGAAGCAGCAGTACTGG  100

seq1  TTTGGGAAACCATCGTAACATTATGCAATGTTCTCAATAAAATTAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAAACCATCGTAACATTATGCAATGTTCTCAATAAAATTAGAATC  150

seq1  TTTGGGGTTTTTCTAGAAACCCAAGTTTAAGTGAAAAAAGAACTTAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTTTTTCTAGAAACCCAAGTTTAAGTGAAAAAAGAACTTAGAAG  200

seq1  CATAGAATGCTTTCAAGTAAAATAGGTTATTTCTTAATACCTCTGTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATGCTTTCAAGTAAAATAGGTTATTTCTTAATACCTCTGTAAGG  250

seq1  CCATTTTCCTAAATGTTCTTTCTTCCTTTGATGTGTGTGTATGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCCTAAATGTTCTTTCTTCCTTTGATGTGTGTGTATGTGTGTGT  300

seq1  GTGTGTGGGGGG  312
      ||||||||||||
seq2  GTGTGTGGGGGG  312


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