BAC Information

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BAC

Clone NameB6Ng01-347K22
Chromosome1 (Build37)
Map Location 167,447,630 - 167,581,961
singlet/doubletdoublet
Overlap geneSacy, Mpzl1, Rcsd1
Upstream geneDpt, Xcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Ppia-ps1-1625
Downstream geneCreg1, Cd247, Pou2f1, LOC665409, Dusp27, Gpa33, Mael, LOC100039795, Tada1l, Pogk, LOC100040287, EG226601, EG226604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347K22.bB6Ng01-347K22.g
ACCGA129215GA129216
length1,135520
definitionB6Ng01-347K22.b B6Ng01-347K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,580,835 - 167,581,961)(167,447,630 - 167,448,154)
sequence
gaattccagttgaattcattcaagtcagcactgattagacatctttatgg
atgcgggacagactgggggttcaaagtaggggtcataggacttgggactc
tgttgataaggaaacacttgccaggtgccgtgacacacacataatcccag
cacttggtaggttgaggcaggcagaagagaggttccaggccatcctcagt
cacatagcctgctgaaggccagccagggttacaggagcacacatccacaa
aaggcaatagggatgtcttcaattcatcccacgctttaatgtgccaaccc
taaatatgggtggcctcccttactgcctaacttgattgcttctcctagtc
agtttttctttctctgttggctgatgtttttttcttccacagcaggagat
acacatcctgagagcctgtgtaactctgagagcctgtgtttatctgagag
ttcgttcccctgtctgggcttactgcttcctctttctttccctcaggaaa
tgcggtcactaaatcttgccattggggccccttatcccttctggttcata
cgggggccccctccctacactccacccacaccccatccacacaactgtcc
tttcccaagatctctttcttttctcccttccttggccaactgccatgcca
gctctgggcaactccgtcttcctggtgtctgtaatcacagctcactccct
ctgaaatccctggtcctcagatccaccctattgataatcatcaaatttct
cctccttgcatcccactttgctagccactgagctaccccacaaacgtgat
actgcttagaagtaactcagttcacacttctgggtttaggctccctggac
ccagctatgactattgcctgggggccctctcaccatgcctccatcgtctc
cttcctgagcatccatgacaaccccagccaaaaccactacaaactcaaga
acttgcttgtgtccagtctcatccactaggacggaccacatcacaagccc
tgagcacatttgtaaatgtgtttactatcatctaaacaaataaacaaacc
acagaagaactcaccagtgccatttttgatgagcattgggacaaaacagc
ctcccttttgttggtgattctgtcttaccgtgtac
ttttttctcaaagtgggcatatagaagaggaacctaaatcaaacaataaa
gcaatgcacgccacccaaaagaggtcatgtattacacaggatgctggaat
ccagagttgggttttaatttgctactttctgtttacataaccttagggga
aatcgtgttacttctccacgtgtttgctctttaatttgtaaaatgggaac
actaatgctaggttttgaacttctgtctgaaaatagtgggatagaatcta
aaaatattccagaaggcaccaggatctgaaagtacaaggtgaagttatgt
aaaaggttatttttctacccaactataaaaataagaaatcagaggcagta
gtagaacttaatgtgaacgcatgtcggcattagggatttggttgtcaggt
aacgtagcaatagtggccaaattagcaaccacataaatcttcattgacca
gtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgcttggttggctt
caatggaaagatatttggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_167580835_167581961
seq2: B6Ng01-347K22.b_51_1185 (reverse)

seq1  GTACACG--TAGACAGAAATCA-CAACAAA--GGA-GCTG-TTTGT-CCA  42
      |||||||   |||||| ||||| |||||||  ||| |||| ||||| |||
seq2  GTACACGGTAAGACAG-AATCACCAACAAAAGGGAGGCTGTTTTGTCCCA  49

seq1  ATGCTCATCAAAAATGGCACTGTTGGGTCCTTCTGT-GTTTGTTTATTTG  91
      |||||||||||||||||||||| || || ||||||| |||||||||||||
seq2  ATGCTCATCAAAAATGGCACTGGTGAGTTCTTCTGTGGTTTGTTTATTTG  99

seq1  TTTAGATGATAAGTAAACACATTTACAAATGTGCTCAGGGCTTGTGATGT  141
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGAT-AGTAAACACATTTACAAATGTGCTCAGGGCTTGTGATGT  148

seq1  GGTCCGTCCTAGTGGATGAGACTGGACACAAGCAAGTTCTTGAGTTTGTA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCGTCCTAGTGGATGAGACTGGACACAAGCAAGTTCTTGAGTTTGTA  198

seq1  GTGGTTTTGGCTGGGGTTGTCATGGATGCTCAGGAAGGAGACGATGGAGG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTGGCTGGGGTTGTCATGGATGCTCAGGAAGGAGACGATGGAGG  248

seq1  CATGGTGAGAGGGCCCCCAGGCAATAGTCATAGCTGGGTCCAGGGAGCCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGAGAGGGCCCCCAGGCAATAGTCATAGCTGGGTCCAGGGAGCCT  298

seq1  AAACCCAGAAGTGTGAACTGAGTTACTTCTAAGCAGTATCACGTTTGTGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGAAGTGTGAACTGAGTTACTTCTAAGCAGTATCACGTTTGTGG  348

seq1  GGTAGCTCAGTGGCTAGCAAAGTGGGATGCAAGGAGGAGAAATTTGATGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTCAGTGGCTAGCAAAGTGGGATGCAAGGAGGAGAAATTTGATGA  398

seq1  TTATCAATAGGGTGGATCTGAGGACCAGGGA-TTCAGAGGGAGTGAGCTG  440
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTATCAATAGGGTGGATCTGAGGACCAGGGATTTCAGAGGGAGTGAGCTG  448

seq1  TGATTACAGACACCAGGAAGACGGAGTTGCCCAGAGCTGGCATGGCAGTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACAGACACCAGGAAGACGGAGTTGCCCAGAGCTGGCATGGCAGTT  498

seq1  GGCCAAGGAAGGGAGAAAAGAAAGAGATCTTGGGAAAGGACAGTTGTGTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGAAGGGAGAAAAGAAAGAGATCTTGGGAAAGGACAGTTGTGTG  548

seq1  GATGGGGTGTGGGTGGAGTGTAGGGAGGGGGCCCCCGTATGAACCAGAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGTGTGGGTGGAGTGTAGGGAGGGGGCCCCCGTATGAACCAGAAG  598

seq1  GGATAAGGGGCCCCAATGGCAAGATTTAGTGACCGCATTTCCTGAGGGAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGGGGCCCCAATGGCAAGATTTAGTGACCGCATTTCCTGAGGGAA  648

seq1  AGAAAGAGGAAGCAGTAAGCCCAGACAGGGGAACGAACTCTCAGATAAAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGAAGCAGTAAGCCCAGACAGGGGAACGAACTCTCAGATAAAC  698

seq1  ACAGGCTCTCAGAGTTACACAGGCTCTCAGGATGTGTATCTCCTGCTGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCTCAGAGTTACACAGGCTCTCAGGATGTGTATCTCCTGCTGTG  748

seq1  GAAGAAAAAAACATCAGCCAACAGAGAAAGAAAAACTGACTAGGAGAAGC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAAACATCAGCCAACAGAGAAAGAAAAACTGACTAGGAGAAGC  798

seq1  AATCAAGTTAGGCAGTAAGGGAGGCCACCCATATTTAGGGTTGGCACATT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGTTAGGCAGTAAGGGAGGCCACCCATATTTAGGGTTGGCACATT  848

seq1  AAAGCGTGGGATGAATTGAAGACATCCCTATTGCCTTTTGTGGATGTGTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGTGGGATGAATTGAAGACATCCCTATTGCCTTTTGTGGATGTGTG  898

seq1  CTCCTGTAACCCTGGCTGGCCTTCAGCAGGCTATGTGACTGAGGATGGCC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTAACCCTGGCTGGCCTTCAGCAGGCTATGTGACTGAGGATGGCC  948

seq1  TGGAACCTCTCTTCTGCCTGCCTCAACCTACCAAGTGCTGGGATTATGTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCTCTCTTCTGCCTGCCTCAACCTACCAAGTGCTGGGATTATGTG  998

seq1  TGTGTCACGGCACCTGGCAAGTGTTTCCTTATCAACAGAGTCCCAAGTCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACGGCACCTGGCAAGTGTTTCCTTATCAACAGAGTCCCAAGTCC  1048

seq1  TATGACCCCTACTTTGAACCCCCAGTCTGTCCCGCATCCATAAAGATGTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCCCTACTTTGAACCCCCAGTCTGTCCCGCATCCATAAAGATGTC  1098

seq1  TAATCAGTGCTGACTTGAATGAATTCAACTGGAATTC  1127
      |||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTGCTGACTTGAATGAATTCAACTGGAATTC  1135

seq1: chr1_167447630_167448154
seq2: B6Ng01-347K22.g_69_594

seq1  GAATTCTTTTTTCTCAAAGTGGGCATATAGAAGAGGAACCTAAATCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCTCAAAGTGGGCATATAGAAGAGGAACCTAAATCAAAC  50

seq1  AATAAAGCAATGCACGCCACCCAAAAGAGGTCATGTATTACACAGGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGCAATGCACGCCACCCAAAAGAGGTCATGTATTACACAGGATGC  100

seq1  TGGAATCCAGAGTTGGGTTTTAATTTGCTACTTTCTGTTTACATAACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCCAGAGTTGGGTTTTAATTTGCTACTTTCTGTTTACATAACCTT  150

seq1  AGGGGAAATCGTGTTACTTCTCCACGTGTTTGCTCTTTAATTTGTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAATCGTGTTACTTCTCCACGTGTTTGCTCTTTAATTTGTAAAAT  200

seq1  GGGAACACTAATGCTAGGTTTTGAACTTCTGTCTGAAAATAGTGGGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACACTAATGCTAGGTTTTGAACTTCTGTCTGAAAATAGTGGGATAG  250

seq1  AATCTAAAAATATTCCAGAAGGCACCAGGATCTGAAAGTACAAGGTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAAATATTCCAGAAGGCACCAGGATCTGAAAGTACAAGGTGAAG  300

seq1  TTATGTAAAAGGTTATTTTTCTACCCAACTATAAAAATAAGAAATCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAAAGGTTATTTTTCTACCCAACTATAAAAATAAGAAATCAGAG  350

seq1  GCAGTAGTAGAACTTAATGTGAACGCATGTCGGCATTAGGGATTTGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGTAGAACTTAATGTGAACGCATGTCGGCATTAGGGATTTGGTTG  400

seq1  TCAGGTAACGTAGCAATAGTGGCCAAATTAGCAACCACATAAATCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAACGTAGCAATAGTGGCCAAATTAGCAACCACATAAATCTTCAT  450

seq1  TGACCAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCTTGGT  500

seq1  TGGCTTCAATGG-AAGAGATTTGGAT  525
      |||||||||||| |||| ||||||||
seq2  TGGCTTCAATGGAAAGATATTTGGAT  526