BAC Information

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BAC

Clone NameB6Ng01-348A23
Chromosome1 (Build37)
Map Location 32,904,760 - 33,052,643
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041238, Khdrbs2, EG408191
Downstream geneEG633498, LOC213711, LOC100040828, EG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348A23.bB6Ng01-348A23.g
ACCGA129467GA129468
length368922
definitionB6Ng01-348A23.b B6Ng01-348A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,904,760 - 32,905,127)(33,052,076 - 33,052,643)
sequence
catagcatctccctttcccatatatgttgctcatgcatgtgtaggccctt
taacctgttcttataggtactattaatgggcagaacaaaagactgttaag
aaatgttagttgctcatgttcattcagcctggagtaaaccaggaacaact
gcagatgacttaacccaggcccgtgctgcaggaggcacactctgcttgag
tccttttgtaaattacaaaacgatgttctttacttatgaaccgttatttc
tacatttcagaaaattgttattttacactgatttctgcagaaggagacat
cttactgccatctgctggaaattttgaaatatatatatgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgt

gaattcaaaaaaatgattacaaccatgttcaaataactcaaatatacgtc
agttcaagttgttaaaatggagttgggttttctgaaggaaatacacattg
aaatgatgcataaaatggcaaattcaataagtgagttaaaaatttcagtg
aaaaccttcaccaacagaatagttcatgtcaaaacagataatcagggata
gaagacaagatggaaaaattagatcattcagtaaagattagtgatgaatt
taaaaatacatgaacagaaagtgggagagcttttggaaacaacaaaagac
agagccttcaagttttggtcatagaagagggcaaagaatactgtatagca
aagttatagagagtttcttcagtgaaatactagaagaaaaaatttccaaa
cttagatagaaagattatcatttaggcacaggaaatctacaggaaacaaa
atagactgggcaagaaagaaaattctccatgatataatatagttaaaaaa
tttttaaaaataataaaggatattgtgagttgaagaaagaaaggataagt
tacttataagcgcaggtccattggcatgacacttgaatatttagcagaaa
cctttaaaggcaaaaagtttgaaaaaatgtattctaatttcagaaaacca
caattgccaacccaaacaatcatacacagcaaaactatcttttaaaattg
aaaaacaaacaaaaaaaattcatgatgagtgggagatggagaacaatggg
aaagctgtaggtgggtaataacaatcttcctctcattcacaaatgcaaac
ctaaaatcacatgcaaataaaaaaaaaacctaaatgaaggtagaaataga
atccaagtgttactcttcaagggaagttattgggttaatgaagttttgta
acttttcatgggaagatgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32904760_32905127
seq2: B6Ng01-348A23.b_54_421

seq1  CATAGCATCTCCCTTTCCCATATATGTTGCTCATGCATGTGTAGGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTCCCTTTCCCATATATGTTGCTCATGCATGTGTAGGCCCTT  50

seq1  TAACCTGTTCTTATAGGTACTATTAATGGGCAGAACAAAAGACTGTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTTCTTATAGGTACTATTAATGGGCAGAACAAAAGACTGTTAAG  100

seq1  AAATGTTAGTTGCTCATGTTCATTCAGCCTGGAGTAAACCAGGAACAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTAGTTGCTCATGTTCATTCAGCCTGGAGTAAACCAGGAACAACT  150

seq1  GCAGATGACTTAACCCAGGCCCGTGCTGCAGGAGGCACACTCTGCTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGACTTAACCCAGGCCCGTGCTGCAGGAGGCACACTCTGCTTGAG  200

seq1  TCCTTTTGTAAATTACAAAACGATGTTCTTTACTTATGAACCGTTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTAAATTACAAAACGATGTTCTTTACTTATGAACCGTTATTTC  250

seq1  TACATTTCAGAAAATTGTTATTTTACACTGATTTCTGCAGAAGGAGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCAGAAAATTGTTATTTTACACTGATTTCTGCAGAAGGAGACAT  300

seq1  CTTACTGCCATCTGCTGGAAATTTTGAAATATATATATGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCCATCTGCTGGAAATTTTGAAATATATATATGTGTGTGTGTGT  350

seq1  GTGTGTGTGTGTGTGTGT  368
      ||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGT  368


seq1: chr1_33052076_33052643
seq2: B6Ng01-348A23.g_67_634 (reverse)

seq1  GACCTGCGCTTATAAGTAACTTATCCTTTCTTTCTTCAACTCACAATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCGCTTATAAGTAACTTATCCTTTCTTTCTTCAACTCACAATATC  50

seq1  CTTTATTATTTTTAAAAATTTTTTAACTATATTATATCATGGAGAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTATTTTTAAAAATTTTTTAACTATATTATATCATGGAGAATTTT  100

seq1  CTTTCTTGCCCAGTCTATTTTGTTTCCTGTAGATTTCCTGTGCCTAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGCCCAGTCTATTTTGTTTCCTGTAGATTTCCTGTGCCTAAATG  150

seq1  ATAATCTTTCTATCTAAGTTTGGAAATTTTTTCTTCTAGTATTTCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTCTATCTAAGTTTGGAAATTTTTTCTTCTAGTATTTCACTGA  200

seq1  AGAAACTCTCTATAACTTTGCTATACAGTATTCTTTGCCCTCTTCTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCTCTATAACTTTGCTATACAGTATTCTTTGCCCTCTTCTATGA  250

seq1  CCAAAACTTGAAGGCTCTGTCTTTTGTTGTTTCCAAAAGCTCTCCCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTTGAAGGCTCTGTCTTTTGTTGTTTCCAAAAGCTCTCCCACTT  300

seq1  TCTGTTCATGTATTTTTAAATTCATCACTAATCTTTACTGAATGATCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCATGTATTTTTAAATTCATCACTAATCTTTACTGAATGATCTAA  350

seq1  TTTTTCCATCTTGTCTTCTATCCCTGATTATCTGTTTTGACATGAACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATCTTGTCTTCTATCCCTGATTATCTGTTTTGACATGAACTAT  400

seq1  TCTGTTGGTGAAGGTTTTCACTGAAATTTTTAACTCACTTATTGAATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGTGAAGGTTTTCACTGAAATTTTTAACTCACTTATTGAATTTG  450

seq1  CCATTTTATGCATCATTTCAATGTGTATTTCCTTCAGAAAACCCAACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATGCATCATTTCAATGTGTATTTCCTTCAGAAAACCCAACTCC  500

seq1  ATTTTAACAACTTGAACTGACGTATATTTGAGTTATTTGAACATGGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACAACTTGAACTGACGTATATTTGAGTTATTTGAACATGGTTGT  550

seq1  AATCATTTTTTTGAATTC  568
      ||||||||||||||||||
seq2  AATCATTTTTTTGAATTC  568


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