BAC Information

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BAC

Clone NameB6Ng01-348G22
Chromosome1 (Build37)
Map Location 148,290,818 - 148,291,927
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571
Downstream geneB830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348G22.bB6Ng01-348G22.g
ACCGA129729GA129730
length1,1101,138
definitionB6Ng01-348G22.b B6Ng01-348G22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggccctggattatcagagtaatatacccgagtgttaggtgg
agaagaagcatacagagaaggtcagaagaaataaatagaagtctcaagga
caaaatgactgcacaataaaacaacaattaacatcgcaaggtgaacaggg
gaaatatcaacccagactatgcctaggttaaaaggcttcatgccattaat
agttgctatgaagaaaaaaaagggggggatattcatccttctatatgttt
ctcaatctaaagttgtcatcactgaacacagtcataaacatattagcaac
actatatggattcagcatgaatcacacacacacacacacacacaggcaca
cagacatgcacacacatacacaggcacacatacatgcacacacacacaca
cacacacacacacacatcatgaaaataggtacagaaaaagaggacatgaa
ttcataaatttgaggagttggaggcaccgggtgagttgaaaaaggcatag
attatgatgtaaatgatataagtacataatttacatataaaactctcaaa
tgatacaataaaatacatttaaaattatagatttacacatacacagaagg
catgaaaaattccttccagtgaacaaattattcagctttaaacttctcat
tccatgtgctcaaatactaagtccaaattcaatccattcaccattgctat
gtgttaatctctcttatgaagagagtctgtggattcataagtccatatag
ccttttcttttcccacctaaattttaacaatggcttctgttcatttctga
agataaagaaaacatttagtttatattatgctttagaaagcaagtttctt
tgacttttaagtaagggaaatgaaactagagtcttacaatggttttagaa
tctttcagaaaatacaaaaggaaaaaaaattagtttggagtctaggctcc
agtgacaaattgtataacacacacacaaacacacacacatatatgtgtat
atatgtatatatgtatattaatcattacctcatacaacatttgtacttca
attttaaatgatttctggagaacaattattttggtcataagtggctatta
aaatagatga
gaattcatgcagttgaatccttctcaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtcccgagttttcttgtattttttcgtcccggattttttctcgtcccg
gatttcagcaccaattcttaatagcgttctcacgcccggccaggaagaac
acaacagaccagaatcttctgcggcaaaactttattgcttacatcttcag
gagctaggagcgcaaaacccccagccccaaaagcgaaagccacccctata
ttacatctttaggagccagagctccggcgcgccaaagcgcagagcgcgct
ctattgtttacatcttaggagcgagagagcagggcgcgcagagccagaga
gatgccagcgagagagaatggcggaaaccccgtcccctttaaggaggagt
tatccttcgcttaggacgcatcactccctgattggctgcagcccatggcc
gagctgacgttcacgggaaaggcagagtacaagtagtcgtaaaataccct
tggcacatgcgcagattatttgtttaccacttagaacacaggatgtcagc
gccatcttgtgacggcgaatgtgggggcggctcccaacaaagtaacataa
aaaggcagacctattagaattataccagacttctcaccagagattatgaa
agccagaagatcctggacagatgttatatagaccctaagaaaacacaaat
gctagcccaggctactctacccagcaaaactctcaattaccatagatgga
gaaactaaagaattccatgataaaaccaaattcacacattatctttccat
gaatccagctccttcagaggatattattgagttaacagcaacacaaggac
agatactacaccctagaaaaagcaagaaagtaatccttcaacaaccttaa
aaaaaggacagccgcagacagaatcacactctaacaacaaaatacagagc
aaaattactttttcttatatctcatatcatggactcattccgataaatta
cacagaactagccagcggtgaatgcgcacaccttaaatcagacctgaagc
atagccaggcagattcgtgagttcaatgttcagtcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148290818_148291927
seq2: B6Ng01-348G22.b_47_1156 (reverse)

seq1  TCATCTAATTTTAATAGCCACTTATGACCAAAAT-ATTG-TCTCAGGAAT  48
      |||||| ||||||||||||||||||||||||||| |||| ||||  ||| 
seq2  TCATCT-ATTTTAATAGCCACTTATGACCAAAATAATTGTTCTCCAGAAA  49

seq1  CCATTTAAAATTGAGGTACAAATGTTGTATTGAGTAATGGATTAATATAC  98
       ||||||||||||| |||||||||||||||   ||||| |||||||||||
seq2  TCATTTAAAATTGAAGTACAAATGTTGTATGAGGTAAT-GATTAATATAC  98

seq1  ATATATACATATATACACATATATGTGTGTGTGTTTGTGTGTGTGTTATA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATATACACATATATGTGTGTGTGTTTGTGTGTGTGTTATA  148

seq1  CAATTTGTCACTGGAGCCTTAGACTCCAAACTAATTTTTTTTCCTTTTGT  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAATTTGTCACTGGAGCC-TAGACTCCAAACTAATTTTTTTTCCTTTTGT  197

seq1  ATTTTTCTGAAAGATTCTAAAACCATTGTAAGACTCTAGTTTCA-TTCCC  247
      | |||||||||||||||||||||||||||||||||||||||||| |||||
seq2  A-TTTTCTGAAAGATTCTAAAACCATTGTAAGACTCTAGTTTCATTTCCC  246

seq1  TTACTTAAAAGTCAAAGAAACTTGCTTTCT-AAGCATAATATAAACTAAA  296
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTACTTAAAAGTCAAAGAAACTTGCTTTCTAAAGCATAATATAAACTAAA  296

seq1  TGTTTTCTTTATCTTCAGAAATGAACAGAAGCCATTGTTAAAATTTAGGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTTATCTTCAGAAATGAACAGAAGCCATTGTTAAAATTTAGGT  346

seq1  GGGAAAAGAAAAGGCTATATGGACTTATGAATCCACAGACTCTCTTCATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGAAAAGGCTATATGGACTTATGAATCCACAGACTCTCTTCATA  396

seq1  AGAGAGATTAACACATAGCAATGGTGAATGGATTGAATTTGGACTTAGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATTAACACATAGCAATGGTGAATGGATTGAATTTGGACTTAGTA  446

seq1  TTTGAGCACATGGAATGAGAAGTTTAAAGCTGAATAATTTGTTCACTGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCACATGGAATGAGAAGTTTAAAGCTGAATAATTTGTTCACTGGA  496

seq1  AGGAATTTTTCATGCCTTCTGTGTATGTGTAAATCTATAATTTTAAATGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTTTCATGCCTTCTGTGTATGTGTAAATCTATAATTTTAAATGT  546

seq1  ATTTTATTGTATCATTTGAGAGTTTTATATGTAAATTATGTACTTATATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGTATCATTTGAGAGTTTTATATGTAAATTATGTACTTATATC  596

seq1  ATTTACATCATAATCTATGCCTTTTTCAACTCACCCGGTGCCTCCAACTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATCATAATCTATGCCTTTTTCAACTCACCCGGTGCCTCCAACTC  646

seq1  CTCAAATTTATGAATTCATGTCCTCTTTTTCTGTACCTATTTTCATGATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTTATGAATTCATGTCCTCTTTTTCTGTACCTATTTTCATGATG  696

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTATGTGTGCCTGTGTATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTATGTGTGCCTGTGTATG  746

seq1  TGTGTGCATGTCTGTGTGCCTGTGTGTGTGTGTGTGTGTGTGATTCATGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATGTCTGTGTGCCTGTGTGTGTGTGTGTGTGTGTGATTCATGC  796

seq1  TGAATCCATATAGTGTTGCTAATATGTTTATGACTGTGTTCAGTGATGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCATATAGTGTTGCTAATATGTTTATGACTGTGTTCAGTGATGAC  846

seq1  AACTTTAGATTGAGAAACATATAGAAGGATGAATATCCCCCCCTTTTTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAGATTGAGAAACATATAGAAGGATGAATATCCCCCCCTTTTTTT  896

seq1  TCTTCATAGCAACTATTAATGGCATGAAGCCTTTTAACCTAGGCATAGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAGCAACTATTAATGGCATGAAGCCTTTTAACCTAGGCATAGTC  946

seq1  TGGGTTGATATTTCCCCTGTTCACCTTGCGATGTTAATTGTTGTTTTATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGATATTTCCCCTGTTCACCTTGCGATGTTAATTGTTGTTTTATT  996

seq1  GTGCAGTCATTTTGTCCTTGAGACTTCTATTTATTTCTTCTGACCTTCTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCATTTTGTCCTTGAGACTTCTATTTATTTCTTCTGACCTTCTC  1046

seq1  TGTATGCTTCTTCTCCACCTAACACTCGGGTATATTACTCTGATAATCCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTTCTTCTCCACCTAACACTCGGGTATATTACTCTGATAATCCA  1096

seq1  GGGCCATGGAATTC  1110
      ||||||||||||||
seq2  GGGCCATGGAATTC  1110