BAC Information

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BAC

Clone NameB6Ng01-348K15
Chromosome1 (Build37)
Map Location 108,072,930 - 108,223,821
singlet/doubletdoublet
Overlap genePhlpp
Upstream geneRnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634
Downstream geneLOC626075, Bcl2, LOC100042085, Fvt1, Vps4b, Serpinb5, LOC671141, Serpinb12, Serpinb13, LOC666394, Serpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348K15.bB6Ng01-348K15.g
ACCGA129892GA129893
length1,1511,099
definitionB6Ng01-348K15.b B6Ng01-348K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,072,930 - 108,074,104)(108,222,722 - 108,223,821)
sequence
gaattcagttacctgatctaagttatgaatacctagcatgaatgagctgt
tttgttcaggactccctggggcatttgtgtcatagggcagtagtataaag
tcttacataaatttttttccttacctattactttagctacagttgcctgc
ttagttcaaatcatagcaacaagaaagagtgttaccagacaggagaacac
acctcgcacctagtgtattttggaaggtgtgtttatgtgggcttctgtgg
tagtcagccagctttccttccctcatttctaccctctttctcttctggaa
atgctcagtccttacatgatctcgtacaaaaatgggtggttatcttcaac
atcatacttattgataagcaggttcttattactgtaattacagtagtacc
gagtagagtagtatagtttgaatatgttactccagtgtgagcttcaacag
tgctttgaaagtacaaaggattttacttgattttgttgttttttttgtgc
ctaacactttgttatgttcatatatttgttcttttttcacatgaagcatg
tgaatcttttgactatggcttgctaactcccatacattgggctttgattg
tcttctagaatatgaaagggcttcacttaaatgatctcatttgtctcttc
agactccattagggaggaggccctggtgtcagtcttcttttcagactgcc
catctgatgcttgctgtgggtttcagcccctggcggagctgaggttaggg
agcagaacttctctgttttgtaattcaactcactttctatgaattggtgc
tgaatttaatttacacttgaatttcccctaaaagctttcagaaaacatgc
tatgtttataatgaggtgctattaccagtttgtcctatgtggggttcctt
gtaaagtgcagatgactctatttttatcacatgggcctttaaaaatgtaa
agaactgagattgacaactgagcacagaacagaaagtattgaaatatcct
aagtattgtggttataatgtgatacttacctttaagtgagagctatggag
ttatagttttacccagtattcttgctgtaaatcttatggaatactgaacg
atactgagaagtggtttatgtgaatctttctgaagcaatgaaaatcccat
c
gaattcaatcaccttgacttaccttccgtgtacccttcagactgaagctc
ttgcccctcggtgctctaattgggaactcaatcctacagcacagtcaggt
gtgacataaacaacctacatgcactctaacaggtgaggagtagagtactt
tgcatggtagaggctcttgcccctgcatgcagaaggagtaatagaaaata
cctttacacacatagtcctcttggggctatctgtgtttgttatctgaaaa
actcatggctcccagaccagcctcagcatctctaggaacacccatccctc
agaaggtatgactcattttctggctttcatttgtcctcacaaatctactc
ccctggaactgaactttcatctcttcccaatttcttggcaaatgtctgcc
ctttacaacttctgagatggctacacactgatttatgcacggcctgctcc
aagacctgagcaatccaccagcctcagtccagaacgtatctacttctctt
ctgagcctcagaagtacacaaaagcaaatgtggcttacaaccagcttctc
aacatttgagctaaaacaaacagaaaccaccctatctgaattctcagcac
ataaatgactcttggagtcagaaaaatgcacatagcaccttctcatatga
ctagaaaacaaaaataaacatattaatatttcacttagcttaaaatttaa
atctgtgcctacaaaaaaaacctgctcaaaacctggatataagaattgct
acagacattaaaacccagaataagataacttagctcaagtaggacagcat
gttctgtatctgctaggtcggggtcaatccccaggttcggaagctcacaa
acattatttttctgaagtaacaaaagaaaaataaaaaaaacacttgatgt
tgggaaataattacaatggagatgctgctgttatggcaattaaaacattt
cctaaaggacaaatctatatttaaagcctttttaatattactcacacaga
gatattctaccgatcagatcctacatctagactcttaccttaggttactt
cttatatacaaggtaagaaaatacaggctcaaggaacagtggctatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108072930_108074104
seq2: B6Ng01-348K15.b_50_1200

seq1  GAATTCAGTTACCTGATCTAAGTTATGAATACCTAGCATGAATGAGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACCTGATCTAAGTTATGAATACCTAGCATGAATGAGCTGT  50

seq1  TTTGTTCAGGACTCCCTGGGGCATTTGTGTCATAGGGCAGTAGTATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGGACTCCCTGGGGCATTTGTGTCATAGGGCAGTAGTATAAAG  100

seq1  TCTTACATAAATTTTTTTCCTTACCTATTACTTTAGCTACAGTTGCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATAAATTTTTTTCCTTACCTATTACTTTAGCTACAGTTGCCTGC  150

seq1  TTAGTTCAAATCATAGCAACAAGAAAGAGTGTTACCAGACAGGAGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCAAATCATAGCAACAAGAAAGAGTGTTACCAGACAGGAGAACAC  200

seq1  ACCTCGCACCTAGTGTATTTTGGAAGGTGTGTTTATGTGGGCTTCTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGCACCTAGTGTATTTTGGAAGGTGTGTTTATGTGGGCTTCTGTGG  250

seq1  TAGTCAGCCAGCTTTCCTTCCCTCATTTCTACCCTCTTTCTCTTCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGCCAGCTTTCCTTCCCTCATTTCTACCCTCTTTCTCTTCTGGAA  300

seq1  ATGCTCAGTCCTTACATGATCTCGTACAAAAATGGGTGGTTATCTTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGTCCTTACATGATCTCGTACAAAAATGGGTGGTTATCTTCAAC  350

seq1  ATCATACTTATTGATAAGCAGGTTCTTATTACTGTAATTACAGTAGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTTATTGATAAGCAGGTTCTTATTACTGTAATTACAGTAGTACC  400

seq1  GAGTAGAGTAGTATAGTTTGAATATGTTACTCCAGTGTGAGCTTCAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGTAGTATAGTTTGAATATGTTACTCCAGTGTGAGCTTCAACAG  450

seq1  TGCTTTGAAAGTACAAAGGATTTTACTTGATTTTGTTGTTTTTTTTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAAAGTACAAAGGATTTTACTTGATTTTGTTGTTTTTTTTGTGC  500

seq1  CTAACACTTTGTTATGTTCATATATTTGTTCTTTTTTCACATGAAGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACTTTGTTATGTTCATATATTTGTTCTTTTTTCACATGAAGCATG  550

seq1  TGAATCTTTTGACTATGGCTTGCTAACTCCCATACATTGGGCTTTGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTTTGACTATGGCTTGCTAACTCCCATACATTGGGCTTTGATTG  600

seq1  TCTTCTAGAATATGAAAGGGCTTCACTTAAATGATCTCATTTGTCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGAATATGAAAGGGCTTCACTTAAATGATCTCATTTGTCTCTTC  650

seq1  AGACTCCATTAGGGAGGAGGCCCTGGTGTCAGTCTTCTTTTCAGACTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCATTAGGGAGGAGGCCCTGGTGTCAGTCTTCTTTTCAGACTGCC  700

seq1  CATCTGATGCTTGCTGTGGGTTTCAGCCCCTGGCGGAGCTGAGGTTAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATGCTTGCTGTGGGTTTCAGCCCCTGGCGGAGCTGAGGTTAGGG  750

seq1  AGCAGAACTTCTCTGTTTTGTAATTCAACTCACTTTCTATGAATTGGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACTTCTCTGTTTTGTAATTCAACTCACTTTCTATGAATTGGTGC  800

seq1  TGAATTTAATTTACACTTGAATTTCCCCTAAAAGCTTTCAGAAAACATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTAATTTACACTTGAATTTCCCCTAAAAGCTTTCAGAAAACATGC  850

seq1  TATGTTTATAATGAGGTGCTATTACCAGTTTGTCCTATGTGGGGTTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTATAATGAGGTGCTATTACCAGTTTGTCCTATGTGGGGTTCCTT  900

seq1  GTAAAGTGCAGATGACTCTATTTTTATCACAT-GGCCTTTAAAAATGTAA  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTAAAGTGCAGATGACTCTATTTTTATCACATGGGCCTTTAAAAATGTAA  950

seq1  AGAACTGAGATTGACAACTGAGCACAGAACAGAAAGTATTGAAATATCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAGATTGACAACTGAGCACAGAACAGAAAGTATTGAAATATCCT  1000

seq1  AAGTATTGTGGTTATAAATTGTGATACTTACCTTTAAGGTTGAGAAGGCT  1049
      |||||||||||||||||  |||||||||||||||||||  |||||  |||
seq2  AAGTATTGTGGTTATAA--TGTGATACTTACCTTTAAG--TGAGA--GCT  1044

seq1  ATGGAGTTATTAGTTTTTTACCCAAGTATTCTTGTTTGTTAAATCTTTAT  1099
      ||||||||| |||  |||||||| |||||||||| |   |||||| ||||
seq2  ATGGAGTTA-TAG--TTTTACCC-AGTATTCTTGCT--GTAAATC-TTAT  1087

seq1  TGGGAAATTACTGAACAGATAACTTGAGAGTGGGGGTTTATGTG-ATCTT  1148
        ||||  |||||||| ||| |||   |||  | |||||||||| |||||
seq2  --GGAA--TACTGAAC-GAT-ACT---GAGAAGTGGTTTATGTGAATCTT  1128

seq1  TCCTTTAAAGCAATGAAAATACCCATC  1175
      ||   | ||||||||||||| ||||||
seq2  TC---TGAAGCAATGAAAAT-CCCATC  1151

seq1: chr1_108222722_108223821
seq2: B6Ng01-348K15.g_65_1163 (reverse)

seq1  ACTATTTGCCACTGTCCTTTGAG-CTGTA-TTTCTTACCTTGTATAT-AG  47
      |||| | |||||||| | ||||| ||||| ||||||||||||||||| ||
seq2  ACTA-TAGCCACTGTTCCTTGAGCCTGTATTTTCTTACCTTGTATATAAG  49

seq1  AGTTAACCTAGGGT-AGAGTCTTAGATGTAGGATCTGATCGGTAGATATT  96
      |  ||||||| ||| |||||| ||||||||||||||||||||||||   |
seq2  AAGTAACCTAAGGTAAGAGTC-TAGATGTAGGATCTGATCGGTAGAATAT  98

seq1  CTCCTGTGTGAGTAATATTTAAAAAGGCTTTAAATATAGATTTGTCCTTT  146
      || |||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  CT-CTGTGTGAGTAATA-TTAAAAAGGCTTTAAATATAGATTTGTCC-TT  145

seq1  TAGGAAATGTTTTAATTTGCCATAACAGCAGCATCTCCATTGTAATTATT  196
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGGAAATGTTTTAA-TTGCCATAACAGCAGCATCTCCATTGTAATTATT  194

seq1  T-CCAACATCAAGTGTTTTTTTTATTTTTCTTTTGTTACTTCAGAAAAAT  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACATCAAGTGTTTTTTTTATTTTTCTTTTGTTACTTCAGAAAAAT  244

seq1  AATGTTTGTGAGCTTCCGAACCTGGGGATTGACCCCGACCTAGCAGATAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGTGAGCTTCCGAACCTGGGGATTGACCCCGACCTAGCAGATAC  294

seq1  AGAACATGCTGTCCTACTTGAGCTAAGTTATCTTATTCTGGGTTTTAATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGCTGTCCTACTTGAGCTAAGTTATCTTATTCTGGGTTTTAATG  344

seq1  TCTGTAGCAATTCTTATATCCAGGTTTTGAGCAGGTTTTTTTTGTAGGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGCAATTCTTATATCCAGGTTTTGAGCAGGTTTTTTTTGTAGGCA  394

seq1  CAGATTTAAATTTTAAGCTAAGTGAAATATTAATATGTTTATTTTTGTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTAAATTTTAAGCTAAGTGAAATATTAATATGTTTATTTTTGTTT  444

seq1  TCTAGTCATATGAGAAGGTGCTATGTGCATTTTTCTGACTCCAAGAGTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCATATGAGAAGGTGCTATGTGCATTTTTCTGACTCCAAGAGTCA  494

seq1  TTTATGTGCTGAGAATTCAGATAGGGTGGTTTCTGTTTGTTTTAGCTCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGCTGAGAATTCAGATAGGGTGGTTTCTGTTTGTTTTAGCTCAA  544

seq1  ATGTTGAGAAGCTGGTTGTAAGCCACATTTGCTTTTGTGTACTTCTGAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGAAGCTGGTTGTAAGCCACATTTGCTTTTGTGTACTTCTGAGG  594

seq1  CTCAGAAGAGAAGTAGATACGTTCTGGACTGAGGCTGGTGGATTGCTCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGAGAAGTAGATACGTTCTGGACTGAGGCTGGTGGATTGCTCAG  644

seq1  GTCTTGGAGCAGGCCGTGCATAAATCAGTGTGTAGCCATCTCAGAAGTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGAGCAGGCCGTGCATAAATCAGTGTGTAGCCATCTCAGAAGTTG  694

seq1  TAAAGGGCAGACATTTGCCAAGAAATTGGGAAGAGATGAAAGTTCAGTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGCAGACATTTGCCAAGAAATTGGGAAGAGATGAAAGTTCAGTTC  744

seq1  CAGGGGAGTAGATTTGTGAGGACAAATGAAAGCCAGAAAATGAGTCATAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGTAGATTTGTGAGGACAAATGAAAGCCAGAAAATGAGTCATAC  794

seq1  CTTCTGAGGGATGGGTGTTCCTAGAGATGCTGAGGCTGGTCTGGGAGCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGGGATGGGTGTTCCTAGAGATGCTGAGGCTGGTCTGGGAGCCA  844

seq1  TGAGTTTTTCAGATAACAAACACAGATAGCCCCAAGAGGACTATGTGTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTCAGATAACAAACACAGATAGCCCCAAGAGGACTATGTGTGT  894

seq1  AAAGGTATTTTCTATTACTCCTTCTGCATGCAGGGGCAAGAGCCTCTACC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATTTTCTATTACTCCTTCTGCATGCAGGGGCAAGAGCCTCTACC  944

seq1  ATGCAAAGTACTCTACTCCTCACCTGTTAGAGTGCATGTAGGTTGTTTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGTACTCTACTCCTCACCTGTTAGAGTGCATGTAGGTTGTTTAT  994

seq1  GTCACACCTGACTGTGCTGTAGGATTGAGTTCCCAATTAGAGCACCGAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACCTGACTGTGCTGTAGGATTGAGTTCCCAATTAGAGCACCGAGG  1044

seq1  GGCAAGAGCTTCAGTCTGAAGGGTACACGGAAGGTAAGTCAAGGTGATTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAGCTTCAGTCTGAAGGGTACACGGAAGGTAAGTCAAGGTGATTG  1094

seq1  AATTC  1100
      |||||
seq2  AATTC  1099