BAC Information

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BAC

Clone NameB6Ng01-350J08
Chromosome1 (Build37)
Map Location 74,814,036 - 74,814,338
singlet/doubletsinglet
Overlap genenone
Upstream geneTns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1, Usp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3
Downstream geneWnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350J08.bB6Ng01-350J08.g
ACCGA131208GA131209
length300272
definitionB6Ng01-350J08.b B6Ng01-350J08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tggagctctgactaggctccctcccacccccacccccacccacccttgtc
ccactcagacatacatctctgtcatacacaccacgcccccctgcctggta
ccttctcctatggctttgataagagactgtgaaatagtgatacttcccga
aacatttatggccagtgttttcttcctgctgtttcattgaataattatat
tcactgatctacagaggtgtgtaaattttaaatccatgtatttatctttt
tgaatcagtaggtcttgagggtttcataggcttatcctttcctgttggtc

taatattctggtggcttcttgatgcctcctcggactcaggccgcttggtg
gagccttgtgttttcttccggatggaactgccatcgttgattcatgagtg
gtgattgctgagaggactggactacagctgctgattcatgctgatgtttt
cctagaggactggactgctgacaacagagattggaatagccctatttcca
aacaggttcacgatcccagttttctattaaccttccttttctactacctc
tagtgggtggtggggtgaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_74814036_74814338
seq2: B6Ng01-350J08.b_52_351

seq1  TGGAGCTCTGACTAGGCTCCCTCCCACCCCCACCCCCACCCACCCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  TGGAGCTCTGACTAGGCTCCCTCCCACCCCCACCCCCACCCACCCTTGTC  50

seq1  CCACTCCCCCACCCACCTCTGCCACACCCCACCCCACCCCCCAGTCTAAA  100
      ||||||   ||  || ||||| || | | |||| | |||||| | ||   
seq2  CCACTCAGACATACATCTCTGTCATA-CACACCACGCCCCCCTGCCTGGT  99

seq1  ACCAAGGAGTTGGACTGTGAGAAGATGCTCAGAGATAATGTTCTTTCCTG  150
      |||      |  | || ||| ||||  ||  || ||| || |  |||| |
seq2  ACCTTCTCCTATGGCTTTGATAAGAGACTGTGAAATAGTGATACTTCCCG  149

seq1  GAACAGTTGAGGCCCTGAGTTCCAGCATCAAATCTACTATCATAAAAACA  200
       |||| ||  ||||     || |  | |    | |  |   ||||  | |
seq2  AAACATTTATGGCCAGTGTTTTCTTCCTGCTGTTTCATTGAATAATTATA  199

seq1  AGGACAAAACAAGAAAACAAAAACAAAAGGGGAAAACCATGCAGGAGACA  250
         ||  | | | | |         |||    ||| ||||| |     | 
seq2  TTCACTGATCTACAGA--GGTGTGTAAATTTTAAATCCATGTATTTATCT  247

seq1  GTCTGAAACAAGATGACTGTAGAGGTTCATGGGGCTAGCCTTTCCTGTTG  300
       | |||| ||  | | ||  || | ||||| ||  || ||||||||||||
seq2  TTTTGAATCAGTAGGTCTTGAGGGTTTCATAGGCTTATCCTTTCCTGTTG  297

seq1  GTC  303
      |||
seq2  GTC  300